RNA–Protein interactions for RNA: ENST00000343638.9

UBTF-202, Transcript of upstream binding transcription factor, humanhuman

TSL 1 (best) BASIC

Gene UBTF, Length 4,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-202ENST00000343638 UGGT2Q9NYU1 1516 aa24.71■■□□□ 1.55
UBTF-202ENST00000343638 WDR62O43379 1518 aa24.7■■□□□ 1.55
UBTF-202ENST00000343638 AKNAQ7Z591 1439 aa24.7■■□□□ 1.54
UBTF-202ENST00000343638 CCDC141Q6ZP82 1450 aa24.7■■□□□ 1.54
UBTF-202ENST00000343638 NCOA1Q15788 1441 aa24.69■■□□□ 1.54
UBTF-202ENST00000343638 MYBBP1AQ9BQG0 1328 aaKnown RBP24.69■■□□□ 1.54
UBTF-202ENST00000343638 PNNQ9H307 717 aaKnown RBP24.69■■□□□ 1.54
UBTF-202ENST00000343638 NUP153P49790 1475 aaKnown RBP24.68■■□□□ 1.54
UBTF-202ENST00000343638 KIF14Q15058 1648 aa24.68■■□□□ 1.54
UBTF-202ENST00000343638 TERF2IPQ9NYB0 399 aa24.67■■□□□ 1.54
UBTF-202ENST00000343638 EID1Q9Y6B2 187 aa24.66■■□□□ 1.54
UBTF-202ENST00000343638 UPF2Q9HAU5 1272 aaKnown RBP24.65■■□□□ 1.54
UBTF-202ENST00000343638 ABCA5Q8WWZ7 1642 aa24.64■■□□□ 1.54
UBTF-202ENST00000343638 ATP10BO94823 1461 aa24.64■■□□□ 1.54
UBTF-202ENST00000343638 RAPGEF6Q8TEU7 1601 aa24.64■■□□□ 1.54
UBTF-202ENST00000343638 LMOD2Q6P5Q4 547 aa24.64■■□□□ 1.53
UBTF-202ENST00000343638 GPATCH8Q9UKJ3 1502 aaKnown RBP24.64■■□□□ 1.53
UBTF-202ENST00000343638 LAS1LQ9Y4W2 734 aaKnown RBP24.64■■□□□ 1.53
UBTF-202ENST00000343638 WDR97A6NE52 1622 aa24.63■■□□□ 1.53
UBTF-202ENST00000343638 ANKRD30BQ9BXX2 1392 aa24.63■■□□□ 1.53
UBTF-202ENST00000343638 EIF4G3O43432 1585 aaKnown RBP24.63■■□□□ 1.53
UBTF-202ENST00000343638 RAPGEF3O95398 923 aa24.62■■□□□ 1.53
UBTF-202ENST00000343638 B4GALNT3Q6L9W6 998 aa24.62■■□□□ 1.53
UBTF-202ENST00000343638 PTPRKQ15262 1439 aa24.62■■□□□ 1.53
UBTF-202ENST00000343638 U2AF1L5P0DN76 240 aaPredicted RBP24.61■■□□□ 1.53
UBTF-202ENST00000343638 U2AF1Q01081 240 aaKnown RBP eCLIP24.61■■□□□ 1.53
UBTF-202ENST00000343638 NBPF1Q3BBV0 1214 aa24.61■■□□□ 1.53
UBTF-202ENST00000343638 SOX12O15370 315 aa24.6■■□□□ 1.53
UBTF-202ENST00000343638 FRAT1Q92837 279 aaPredicted RBP24.6■■□□□ 1.53
UBTF-202ENST00000343638 CNTLNQ9NXG0 1405 aa24.59■■□□□ 1.53
UBTF-202ENST00000343638 KIAA0556O60303 1618 aa24.58■■□□□ 1.53
UBTF-202ENST00000343638 EVC2Q86UK5 1308 aa24.58■■□□□ 1.53
UBTF-202ENST00000343638 FTSJ3Q8IY81 847 aaKnown RBP24.58■■□□□ 1.53
UBTF-202ENST00000343638 CFAP70Q5T0N1 1121 aa24.56■■□□□ 1.52
UBTF-202ENST00000343638 RCAN3Q9UKA8 241 aa24.56■■□□□ 1.52
UBTF-202ENST00000343638 MYH16Q9H6N6 1097 aa24.55■■□□□ 1.52
UBTF-202ENST00000343638 CENPJQ9HC77 1338 aaPredicted RBP24.55■■□□□ 1.52
UBTF-202ENST00000343638 NUP160Q12769 1436 aa24.54■■□□□ 1.52
UBTF-202ENST00000343638 ERICH6BQ5W0A0 696 aa24.54■■□□□ 1.52
UBTF-202ENST00000343638 CD109Q6YHK3 1445 aa24.52■■□□□ 1.52
UBTF-202ENST00000343638 PDE3BQ13370 1112 aa24.52■■□□□ 1.52
UBTF-202ENST00000343638 MINK1Q8N4C8 1332 aaPredicted RBP24.51■■□□□ 1.51
UBTF-202ENST00000343638 DISP1Q96F81 1524 aa24.5■■□□□ 1.51
UBTF-202ENST00000343638 TARBP1Q13395 1621 aaKnown RBP24.5■■□□□ 1.51
UBTF-202ENST00000343638 TMEM132EQ6IEE7 984 aa24.49■■□□□ 1.51
UBTF-202ENST00000343638 HAP1P54257 671 aaPredicted RBP24.49■■□□□ 1.51
UBTF-202ENST00000343638 CFAP43Q8NDM7 1665 aa24.49■■□□□ 1.51
UBTF-202ENST00000343638 PBRM1Q86U86 1689 aa24.48■■□□□ 1.51
UBTF-202ENST00000343638 CGNL1Q0VF96 1302 aa24.47■■□□□ 1.51
UBTF-202ENST00000343638 ZBED9Q6R2W3 1325 aa24.47■■□□□ 1.51
UBTF-202ENST00000343638 GOLGA2Q08379 1002 aa24.47■■□□□ 1.51
UBTF-202ENST00000343638 CCDC146Q8IYE0 955 aa24.47■■□□□ 1.51
UBTF-202ENST00000343638 MS4A1P11836 297 aa24.47■■□□□ 1.51
UBTF-202ENST00000343638 ADGRL1O94910 1474 aa24.45■■□□□ 1.51
UBTF-202ENST00000343638 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.45■■□□□ 1.51
UBTF-202ENST00000343638 NUTM2FA1L443 756 aa24.44■■□□□ 1.5
UBTF-202ENST00000343638 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.43■■□□□ 1.5
UBTF-202ENST00000343638 SLC52A1Q9NWF4 448 aa24.42■■□□□ 1.5
UBTF-202ENST00000343638 PAK3O75914 559 aaPredicted RBP24.42■■□□□ 1.5
UBTF-202ENST00000343638 TCOF1Q13428 1488 aaKnown RBP24.42■■□□□ 1.5
UBTF-202ENST00000343638 NGDNQ8NEJ9 315 aaKnown RBP24.41■■□□□ 1.5
UBTF-202ENST00000343638 SAMD9Q5K651 1589 aa24.4■■□□□ 1.5
UBTF-202ENST00000343638 RPRD2Q5VT52 1461 aaKnown RBP24.4■■□□□ 1.5
UBTF-202ENST00000343638 FANCAO15360 1455 aa24.39■■□□□ 1.5
UBTF-202ENST00000343638 PLCH2O75038 1416 aa24.38■■□□□ 1.49
UBTF-202ENST00000343638 MAPKBP1O60336 1514 aa24.38■■□□□ 1.49
UBTF-202ENST00000343638 HSP90AA1P07900 732 aaKnown RBP24.38■■□□□ 1.49
UBTF-202ENST00000343638 RGS3P49796 1198 aa24.37■■□□□ 1.49
UBTF-202ENST00000343638 CHMP4BQ9H444 224 aaKnown RBP24.35■■□□□ 1.49
UBTF-202ENST00000343638 CALD1Q05682 793 aaKnown RBP24.33■■□□□ 1.49
UBTF-202ENST00000343638 RTF1Q92541 710 aaKnown RBP24.32■■□□□ 1.48
UBTF-202ENST00000343638 ITSN2Q9NZM3 1697 aa24.32■■□□□ 1.48
UBTF-202ENST00000343638 ERBINQ96RT1 1412 aa24.32■■□□□ 1.48
UBTF-202ENST00000343638 BRD4O60885 1362 aaPredicted RBP24.31■■□□□ 1.48
UBTF-202ENST00000343638 RPGRIP1LQ68CZ1 1315 aa24.3■■□□□ 1.48
UBTF-202ENST00000343638 A0A0G2JS52 829 aa24.3■■□□□ 1.48
UBTF-202ENST00000343638 C11orf95C9JLR9 678 aaPredicted RBP24.3■■□□□ 1.48
UBTF-202ENST00000343638 CABP2Q9NPB3 220 aa24.3■■□□□ 1.48
UBTF-202ENST00000343638 APAF1O14727 1248 aa24.29■■□□□ 1.48
UBTF-202ENST00000343638 RRP7AQ9Y3A4 280 aaKnown RBP24.29■■□□□ 1.48
UBTF-202ENST00000343638 ASXL2Q76L83 1435 aa24.28■■□□□ 1.48
UBTF-202ENST00000343638 COG3Q96JB2 828 aa24.28■■□□□ 1.48
UBTF-202ENST00000343638 DHX29Q7Z478 1369 aaKnown RBP24.27■■□□□ 1.48
UBTF-202ENST00000343638 IPO8O15397 1037 aaKnown RBP24.27■■□□□ 1.48
UBTF-202ENST00000343638 CEP170Q5SW79 1584 aa24.27■■□□□ 1.48
UBTF-202ENST00000343638 SYCP2Q9BX26 1530 aa24.24■■□□□ 1.47
UBTF-202ENST00000343638 AMPHP49418 695 aa24.23■■□□□ 1.47
UBTF-202ENST00000343638 DDRGK1Q96HY6 314 aa24.23■■□□□ 1.47
UBTF-202ENST00000343638 WDR7Q9Y4E6 1490 aa24.22■■□□□ 1.47
UBTF-202ENST00000343638 DENND4BO75064 1496 aaPredicted RBP24.22■■□□□ 1.47
UBTF-202ENST00000343638 NGEFQ8N5V2 710 aa24.22■■□□□ 1.47
UBTF-202ENST00000343638 PRAM1Q96QH2 718 aa24.21■■□□□ 1.47
UBTF-202ENST00000343638 SLC12A5Q9H2X9 1139 aa24.21■■□□□ 1.47
UBTF-202ENST00000343638 E9PSI1 815 aa24.2■■□□□ 1.46
UBTF-202ENST00000343638 GGNBP2Q9H3C7 697 aa24.2■■□□□ 1.46
UBTF-202ENST00000343638 ABCC2Q92887 1545 aa24.2■■□□□ 1.46
UBTF-202ENST00000343638 CCDC184Q52MB2 194 aa24.19■■□□□ 1.46
UBTF-202ENST00000343638 PPP2R1AP30153 589 aa24.19■■□□□ 1.46
UBTF-202ENST00000343638 TRAPPC8Q9Y2L5 1435 aa24.19■■□□□ 1.46
UBTF-202ENST00000343638 TXNDC2Q86VQ3 553 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms