RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 CENPJQ9HC77 1338 aaPredicted RBP15.09■□□□□ 0.01
SEMA6A-202ENST00000343348 H3BQV1 296 aa15.08■□□□□ 0.01
SEMA6A-202ENST00000343348 IFFO2Q5TF58 517 aa15.08■□□□□ 0.01
SEMA6A-202ENST00000343348 RSPH6AQ9H0K4 717 aa15.08■□□□□ 0
SEMA6A-202ENST00000343348 GSE1Q14687 1217 aa15.07■□□□□ 0
SEMA6A-202ENST00000343348 LTV1Q96GA3 475 aaPredicted RBP15.07■□□□□ 0
SEMA6A-202ENST00000343348 SPAG9O60271 1321 aaKnown RBP15.07■□□□□ 0
SEMA6A-202ENST00000343348 SETQ01105 290 aaPredicted RBP15.07■□□□□ 0
SEMA6A-202ENST00000343348 CEP89Q96ST8 783 aa15.07■□□□□ 0
SEMA6A-202ENST00000343348 DDX11L8A8MPP1 907 aa15.07■□□□□ 0
SEMA6A-202ENST00000343348 ANKRD45Q5TZF3 282 aa15.06■□□□□ 0
SEMA6A-202ENST00000343348 MARCH6O60337 910 aa15.06■□□□□ 0
SEMA6A-202ENST00000343348 HMMRO75330 724 aa15.06■□□□□ 0
SEMA6A-202ENST00000343348 CCDC34Q96HJ3 373 aa15.06■□□□□ 0
SEMA6A-202ENST00000343348 ELL2O00472 640 aaPredicted RBP15.06■□□□□ 0
SEMA6A-202ENST00000343348 GOLGA6L19H0YKK7 550 aa15.06■□□□□ 0
SEMA6A-202ENST00000343348 KANK4Q5T7N3 995 aaPredicted RBP15.05■□□□□ 0
SEMA6A-202ENST00000343348 PDE4AP27815 886 aa15.05■□□□□ -0
SEMA6A-202ENST00000343348 FAM13BQ9NYF5 915 aa15.05■□□□□ -0
SEMA6A-202ENST00000343348 NUTM2FA1L443 756 aa15.05■□□□□ -0
SEMA6A-202ENST00000343348 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.05■□□□□ -0
SEMA6A-202ENST00000343348 FBXW7Q969H0 707 aa15.04■□□□□ -0
SEMA6A-202ENST00000343348 MPHOSPH9Q99550 1183 aa15.04■□□□□ -0
SEMA6A-202ENST00000343348 MCTP1Q6DN14 999 aa15.04■□□□□ -0
SEMA6A-202ENST00000343348 FRAT2O75474 233 aaPredicted RBP15.03■□□□□ -0
SEMA6A-202ENST00000343348 FAM184AQ8NB25 1140 aa15.03■□□□□ -0
SEMA6A-202ENST00000343348 HDGFP51858 240 aaKnown RBP15.03■□□□□ -0
SEMA6A-202ENST00000343348 ARHGAP35Q9NRY4 1499 aa15.03■□□□□ -0
SEMA6A-202ENST00000343348 RAB3GAP2Q9H2M9 1393 aa15.02■□□□□ -0
SEMA6A-202ENST00000343348 EXOC6Q8TAG9 804 aa15.02■□□□□ -0
SEMA6A-202ENST00000343348 G3V3G9 751 aa15.02■□□□□ -0
SEMA6A-202ENST00000343348 DCAF8Q5TAQ9 597 aa15.02■□□□□ -0
SEMA6A-202ENST00000343348 CRBNQ96SW2 442 aa15.02■□□□□ -0
SEMA6A-202ENST00000343348 BECN2A8MW95 431 aa15.02□□□□□ -0.01
SEMA6A-202ENST00000343348 TSR1Q2NL82 804 aaKnown RBP15.01□□□□□ -0.01
SEMA6A-202ENST00000343348 FAM161AQ3B820 660 aa15□□□□□ -0.01
SEMA6A-202ENST00000343348 TMX4Q9H1E5 349 aaPredicted RBP14.99□□□□□ -0.01
SEMA6A-202ENST00000343348 FHAD1B1AJZ9 1412 aa14.99□□□□□ -0.01
SEMA6A-202ENST00000343348 FOSBP53539 338 aa14.98□□□□□ -0.01
SEMA6A-202ENST00000343348 SOGA1O94964 1423 aa14.98□□□□□ -0.01
SEMA6A-202ENST00000343348 PCMTD1Q96MG8 357 aaPredicted RBP14.98□□□□□ -0.01
SEMA6A-202ENST00000343348 NUP155O75694 1391 aa14.97□□□□□ -0.01
SEMA6A-202ENST00000343348 NGEFQ8N5V2 710 aa14.97□□□□□ -0.01
SEMA6A-202ENST00000343348 USP35Q9P2H5 1018 aa14.96□□□□□ -0.01
SEMA6A-202ENST00000343348 CENPQQ7L2Z9 268 aaPredicted RBP14.96□□□□□ -0.01
SEMA6A-202ENST00000343348 COG6Q9Y2V7 657 aa14.96□□□□□ -0.01
SEMA6A-202ENST00000343348 AMPHP49418 695 aa14.96□□□□□ -0.01
SEMA6A-202ENST00000343348 RAD21O60216 631 aa14.96□□□□□ -0.02
SEMA6A-202ENST00000343348 NECTIN2Q92692 538 aa14.96□□□□□ -0.02
SEMA6A-202ENST00000343348 HOMER1Q86YM7 354 aa14.95□□□□□ -0.02
SEMA6A-202ENST00000343348 L3MBTL2Q969R5 705 aa14.95□□□□□ -0.02
SEMA6A-202ENST00000343348 KIF3AQ9Y496 699 aa14.93□□□□□ -0.02
SEMA6A-202ENST00000343348 ERCC6Q03468 1493 aa14.93□□□□□ -0.02
SEMA6A-202ENST00000343348 SKOR2Q2VWA4 1001 aaPredicted RBP14.93□□□□□ -0.02
SEMA6A-202ENST00000343348 NLRP13Q86W25 1043 aa14.93□□□□□ -0.02
SEMA6A-202ENST00000343348 GPS2Q13227 327 aa14.93□□□□□ -0.02
SEMA6A-202ENST00000343348 NGDNQ8NEJ9 315 aaKnown RBP14.93□□□□□ -0.02
SEMA6A-202ENST00000343348 TPM1P09493 284 aa14.93□□□□□ -0.02
SEMA6A-202ENST00000343348 AKAP17AQ02040 695 aaKnown RBP14.93□□□□□ -0.02
SEMA6A-202ENST00000343348 GTF2E1P29083 439 aaPredicted RBP14.92□□□□□ -0.02
SEMA6A-202ENST00000343348 RRP1P56182 461 aaKnown RBP14.92□□□□□ -0.02
SEMA6A-202ENST00000343348 TRAK1Q9UPV9 953 aa14.92□□□□□ -0.02
SEMA6A-202ENST00000343348 CCDC70Q6NSX1 233 aa14.92□□□□□ -0.02
SEMA6A-202ENST00000343348 TPM2P07951 284 aa14.91□□□□□ -0.02
SEMA6A-202ENST00000343348 CARMIL1Q5VZK9 1371 aa14.91□□□□□ -0.02
SEMA6A-202ENST00000343348 ANO2Q9NQ90 1003 aa14.91□□□□□ -0.02
SEMA6A-202ENST00000343348 TERF2IPQ9NYB0 399 aa14.91□□□□□ -0.02
SEMA6A-202ENST00000343348 PANK3Q9H999 370 aa14.91□□□□□ -0.02
SEMA6A-202ENST00000343348 EIF3AQ14152 1382 aaKnown RBP14.9□□□□□ -0.02
SEMA6A-202ENST00000343348 BICD2Q8TD16 824 aa14.9□□□□□ -0.02
SEMA6A-202ENST00000343348 CUX2O14529 1486 aa14.9□□□□□ -0.02
SEMA6A-202ENST00000343348 PDE3BQ13370 1112 aa14.89□□□□□ -0.03
SEMA6A-202ENST00000343348 DIAPH3Q9NSV4 1193 aa14.89□□□□□ -0.03
SEMA6A-202ENST00000343348 HNRNPMP52272 730 aaKnown RBP eCLIP14.89□□□□□ -0.03
SEMA6A-202ENST00000343348 ATP6V1DQ9Y5K8 247 aa14.89□□□□□ -0.03
SEMA6A-202ENST00000343348 EIF2S2P20042 333 aaKnown RBP14.88□□□□□ -0.03
SEMA6A-202ENST00000343348 TEX35Q5T0J7 233 aa14.88□□□□□ -0.03
SEMA6A-202ENST00000343348 LMOD3Q0VAK6 560 aa14.87□□□□□ -0.03
SEMA6A-202ENST00000343348 HDAC5Q9UQL6 1122 aa14.87□□□□□ -0.03
SEMA6A-202ENST00000343348 KDM4AO75164 1064 aa14.87□□□□□ -0.03
SEMA6A-202ENST00000343348 KIF15Q9NS87 1388 aa14.87□□□□□ -0.03
SEMA6A-202ENST00000343348 APPP05067 770 aa14.87□□□□□ -0.03
SEMA6A-202ENST00000343348 MYBBP1AQ9BQG0 1328 aaKnown RBP14.87□□□□□ -0.03
SEMA6A-202ENST00000343348 VPS37CA5D8V6 355 aaPredicted RBP14.86□□□□□ -0.03
SEMA6A-202ENST00000343348 ZKSCAN2Q63HK3 967 aa14.86□□□□□ -0.03
SEMA6A-202ENST00000343348 IFT57Q9NWB7 429 aa14.86□□□□□ -0.03
SEMA6A-202ENST00000343348 R3HCC1Q9Y3T6 440 aaKnown RBP14.86□□□□□ -0.03
SEMA6A-202ENST00000343348 SYNE3Q6ZMZ3 975 aa14.86□□□□□ -0.03
SEMA6A-202ENST00000343348 KIF3BO15066 747 aa14.86□□□□□ -0.03
SEMA6A-202ENST00000343348 FAM43AQ8N2R8 423 aa14.86□□□□□ -0.03
SEMA6A-202ENST00000343348 ABCC8Q09428 1581 aa14.86□□□□□ -0.03
SEMA6A-202ENST00000343348 ST20-MTHFSA0A0A6YYL1 179 aa14.85□□□□□ -0.03
SEMA6A-202ENST00000343348 TRIM29Q14134 588 aa14.85□□□□□ -0.03
SEMA6A-202ENST00000343348 NAP1L1P55209 391 aaKnown RBP14.85□□□□□ -0.03
SEMA6A-202ENST00000343348 CALRP27797 417 aaKnown RBP14.84□□□□□ -0.03
SEMA6A-202ENST00000343348 VPS8Q8N3P4 1428 aa14.84□□□□□ -0.03
SEMA6A-202ENST00000343348 SKIDA1Q1XH10 827 aa14.84□□□□□ -0.03
SEMA6A-202ENST00000343348 CHMP4AQ9BY43 222 aa14.83□□□□□ -0.03
SEMA6A-202ENST00000343348 TTLL5Q6EMB2 1281 aa14.83□□□□□ -0.04
SEMA6A-202ENST00000343348 SASS6Q6UVJ0 657 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms