RNA–Protein interactions for RNA: ENST00000342784.6

SYDE1-201, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYDE1, Length 3,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-201ENST00000342784 DHX29Q7Z478 1369 aaKnown RBP17.79■□□□□ 0.44
SYDE1-201ENST00000342784 FYCO1Q9BQS8 1478 aa17.79■□□□□ 0.44
SYDE1-201ENST00000342784 POGKQ9P215 609 aa17.79■□□□□ 0.44
SYDE1-201ENST00000342784 PLB1Q6P1J6 1458 aa17.79■□□□□ 0.44
SYDE1-201ENST00000342784 PDE3BQ13370 1112 aa17.78■□□□□ 0.44
SYDE1-201ENST00000342784 UGGT2Q9NYU1 1516 aa17.78■□□□□ 0.44
SYDE1-201ENST00000342784 KIAA0556O60303 1618 aa17.77■□□□□ 0.44
SYDE1-201ENST00000342784 CDK13Q14004 1512 aaKnown RBP17.77■□□□□ 0.44
SYDE1-201ENST00000342784 RGS3P49796 1198 aa17.77■□□□□ 0.43
SYDE1-201ENST00000342784 PTPRGP23470 1445 aa17.77■□□□□ 0.43
SYDE1-201ENST00000342784 NCBP3Q53F19 620 aaKnown RBP17.76■□□□□ 0.43
SYDE1-201ENST00000342784 MYOM3Q5VTT5 1437 aa17.74■□□□□ 0.43
SYDE1-201ENST00000342784 CDCA7LQ96GN5 454 aa17.73■□□□□ 0.43
SYDE1-201ENST00000342784 NAP1L2Q9ULW6 460 aaPredicted RBP17.73■□□□□ 0.43
SYDE1-201ENST00000342784 KTN1Q86UP2 1357 aaKnown RBP17.73■□□□□ 0.43
SYDE1-201ENST00000342784 MYBBP1AQ9BQG0 1328 aaKnown RBP17.72■□□□□ 0.43
SYDE1-201ENST00000342784 CENPQQ7L2Z9 268 aaPredicted RBP17.72■□□□□ 0.43
SYDE1-201ENST00000342784 CHMP4BQ9H444 224 aaKnown RBP17.72■□□□□ 0.43
SYDE1-201ENST00000342784 SLKQ9H2G2 1235 aaPredicted RBP17.71■□□□□ 0.43
SYDE1-201ENST00000342784 SLC4A1APQ9BWU0 796 aaKnown RBP17.71■□□□□ 0.43
SYDE1-201ENST00000342784 SPATA31E1Q6ZUB1 1445 aa17.71■□□□□ 0.43
SYDE1-201ENST00000342784 KIF15Q9NS87 1388 aa17.71■□□□□ 0.43
SYDE1-201ENST00000342784 BECN1Q14457 450 aa17.71■□□□□ 0.42
SYDE1-201ENST00000342784 BBXQ8WY36 941 aaPredicted RBP17.71■□□□□ 0.42
SYDE1-201ENST00000342784 ERCC6L2Q5T890 1561 aa17.71■□□□□ 0.42
SYDE1-201ENST00000342784 BRD4O60885 1362 aaPredicted RBP17.7■□□□□ 0.42
SYDE1-201ENST00000342784 USP47Q96K76 1375 aa17.7■□□□□ 0.42
SYDE1-201ENST00000342784 PRDM4Q9UKN5 801 aa17.7■□□□□ 0.42
SYDE1-201ENST00000342784 RALBP1Q15311 655 aa17.69■□□□□ 0.42
SYDE1-201ENST00000342784 SENP3Q9H4L4 574 aaPredicted RBP17.69■□□□□ 0.42
SYDE1-201ENST00000342784 MIA2Q96PC5 1412 aa17.68■□□□□ 0.42
SYDE1-201ENST00000342784 PLEKHD1A6NEE1 506 aa17.68■□□□□ 0.42
SYDE1-201ENST00000342784 GOLGA6L3A6NEY3 463 aa17.68■□□□□ 0.42
SYDE1-201ENST00000342784 C8orf34Q49A92 452 aa17.68■□□□□ 0.42
SYDE1-201ENST00000342784 ROCK2O75116 1388 aaKnown RBP17.68■□□□□ 0.42
SYDE1-201ENST00000342784 LRPPRCP42704 1394 aaKnown RBP17.68■□□□□ 0.42
SYDE1-201ENST00000342784 EPRSP07814 1512 aaKnown RBP17.68■□□□□ 0.42
SYDE1-201ENST00000342784 KDM2AQ9Y2K7 1162 aa17.66■□□□□ 0.42
SYDE1-201ENST00000342784 ARID4BQ4LE39 1312 aaPredicted RBP17.65■□□□□ 0.42
SYDE1-201ENST00000342784 CLCN1P35523 988 aa17.65■□□□□ 0.42
SYDE1-201ENST00000342784 HECW1Q76N89 1606 aa17.64■□□□□ 0.41
SYDE1-201ENST00000342784 NLRP13Q86W25 1043 aa17.64■□□□□ 0.41
SYDE1-201ENST00000342784 DENND4BO75064 1496 aaPredicted RBP17.64■□□□□ 0.41
SYDE1-201ENST00000342784 RPRD2Q5VT52 1461 aaKnown RBP17.64■□□□□ 0.41
SYDE1-201ENST00000342784 NUP153P49790 1475 aaKnown RBP17.63■□□□□ 0.41
SYDE1-201ENST00000342784 C20orf194Q5TEA3 1177 aa17.63■□□□□ 0.41
SYDE1-201ENST00000342784 GZF1Q9H116 711 aaPredicted RBP17.63■□□□□ 0.41
SYDE1-201ENST00000342784 ZNF644Q9H582 1327 aaPredicted RBP17.63■□□□□ 0.41
SYDE1-201ENST00000342784 ANKRD30BQ9BXX2 1392 aa17.63■□□□□ 0.41
SYDE1-201ENST00000342784 LRRIQ1Q96JM4 1722 aa17.62■□□□□ 0.41
SYDE1-201ENST00000342784 RAPGEF6Q8TEU7 1601 aa17.62■□□□□ 0.41
SYDE1-201ENST00000342784 DHX37Q8IY37 1157 aaKnown RBP17.61■□□□□ 0.41
SYDE1-201ENST00000342784 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.61■□□□□ 0.41
SYDE1-201ENST00000342784 KDM2BQ8NHM5 1336 aa17.6■□□□□ 0.41
SYDE1-201ENST00000342784 CARD11Q9BXL7 1154 aa17.6■□□□□ 0.41
SYDE1-201ENST00000342784 XRCC6P12956 609 aaKnown RBP eCLIP17.6■□□□□ 0.41
SYDE1-201ENST00000342784 GTF2E1P29083 439 aaPredicted RBP17.59■□□□□ 0.41
SYDE1-201ENST00000342784 CYB5RLQ6IPT4 315 aa17.59■□□□□ 0.41
SYDE1-201ENST00000342784 TEX14Q8IWB6 1497 aa17.59■□□□□ 0.41
SYDE1-201ENST00000342784 MAGI3Q5TCQ9 1506 aa17.58■□□□□ 0.41
SYDE1-201ENST00000342784 PANK2Q9BZ23 570 aa17.57■□□□□ 0.4
SYDE1-201ENST00000342784 CALD1Q05682 793 aaKnown RBP17.56■□□□□ 0.4
SYDE1-201ENST00000342784 TRIM44Q96DX7 344 aaPredicted RBP17.56■□□□□ 0.4
SYDE1-201ENST00000342784 UPF2Q9HAU5 1272 aaKnown RBP17.55■□□□□ 0.4
SYDE1-201ENST00000342784 CFDP1Q9UEE9 299 aaPredicted RBP17.55■□□□□ 0.4
SYDE1-201ENST00000342784 MYH16Q9H6N6 1097 aa17.54■□□□□ 0.4
SYDE1-201ENST00000342784 POLR1AO95602 1720 aaPredicted RBP17.54■□□□□ 0.4
SYDE1-201ENST00000342784 RSPH4AQ5TD94 716 aa17.53■□□□□ 0.4
SYDE1-201ENST00000342784 NPM1P06748 294 aaKnown RBP eCLIP17.53■□□□□ 0.4
SYDE1-201ENST00000342784 ATP10BO94823 1461 aa17.53■□□□□ 0.4
SYDE1-201ENST00000342784 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.4
SYDE1-201ENST00000342784 ST20-MTHFSA0A0A6YYL1 179 aa17.52■□□□□ 0.4
SYDE1-201ENST00000342784 SUPT6HQ7KZ85 1726 aaKnown RBP17.52■□□□□ 0.39
SYDE1-201ENST00000342784 KDM6BO15054 1643 aa17.51■□□□□ 0.39
SYDE1-201ENST00000342784 EHBP1L1Q8N3D4 1523 aa17.51■□□□□ 0.39
SYDE1-201ENST00000342784 ESPNB1AK53 854 aa17.51■□□□□ 0.39
SYDE1-201ENST00000342784 SPRYD3Q8NCJ5 442 aa17.51■□□□□ 0.39
SYDE1-201ENST00000342784 MRE11P49959 708 aa17.5■□□□□ 0.39
SYDE1-201ENST00000342784 CC2D1BQ5T0F9 858 aaKnown RBP17.5■□□□□ 0.39
SYDE1-201ENST00000342784 STAC3Q96MF2 364 aa17.5■□□□□ 0.39
SYDE1-201ENST00000342784 RGL3Q3MIN7 710 aa17.49■□□□□ 0.39
SYDE1-201ENST00000342784 GCC2Q8IWJ2 1684 aa17.49■□□□□ 0.39
SYDE1-201ENST00000342784 CANXP27824 592 aaKnown RBP17.48■□□□□ 0.39
SYDE1-201ENST00000342784 BCORL1Q5H9F3 1711 aa17.48■□□□□ 0.39
SYDE1-201ENST00000342784 TPM2P07951 284 aa17.48■□□□□ 0.39
SYDE1-201ENST00000342784 TROQ12816 1431 aaPredicted RBP17.47■□□□□ 0.39
SYDE1-201ENST00000342784 PDCL3Q9H2J4 239 aa17.46■□□□□ 0.39
SYDE1-201ENST00000342784 MCM4P33991 863 aa17.46■□□□□ 0.39
SYDE1-201ENST00000342784 IPO4Q8TEX9 1081 aaKnown RBP17.46■□□□□ 0.39
SYDE1-201ENST00000342784 FSD2A1L4K1 749 aa17.46■□□□□ 0.39
SYDE1-201ENST00000342784 ABCA8O94911 1581 aa17.46■□□□□ 0.39
SYDE1-201ENST00000342784 SHROOM2Q13796 1616 aa17.45■□□□□ 0.38
SYDE1-201ENST00000342784 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.45■□□□□ 0.38
SYDE1-201ENST00000342784 TRAK2O60296 914 aa17.44■□□□□ 0.38
SYDE1-201ENST00000342784 CHMP4AQ9BY43 222 aa17.44■□□□□ 0.38
SYDE1-201ENST00000342784 SEC24BO95487 1268 aa17.43■□□□□ 0.38
SYDE1-201ENST00000342784 ARHGEF11O15085 1522 aa17.43■□□□□ 0.38
SYDE1-201ENST00000342784 GRPEL1Q9HAV7 217 aa17.43■□□□□ 0.38
SYDE1-201ENST00000342784 WDR43Q15061 677 aaKnown RBP eCLIP17.42■□□□□ 0.38
SYDE1-201ENST00000342784 USP19O94966 1318 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms