RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 ERICH6BQ5W0A0 696 aa9.87□□□□□ -0.83
PTPRR-202ENST00000342084 TMC1Q8TDI8 760 aa9.87□□□□□ -0.83
PTPRR-202ENST00000342084 PNISRQ8TF01 805 aaKnown RBP9.87□□□□□ -0.83
PTPRR-202ENST00000342084 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.87□□□□□ -0.83
PTPRR-202ENST00000342084 NUDCQ9Y266 331 aa9.87□□□□□ -0.83
PTPRR-202ENST00000342084 ROCK2O75116 1388 aaKnown RBP9.87□□□□□ -0.83
PTPRR-202ENST00000342084 CDC42BPBQ9Y5S2 1711 aa9.87□□□□□ -0.83
PTPRR-202ENST00000342084 ARHGEF12Q9NZN5 1544 aa9.86□□□□□ -0.83
PTPRR-202ENST00000342084 PTPRGP23470 1445 aa9.86□□□□□ -0.83
PTPRR-202ENST00000342084 SALL2Q9Y467 1007 aaPredicted RBP9.86□□□□□ -0.83
PTPRR-202ENST00000342084 FAM135AQ9P2D6 1515 aa9.86□□□□□ -0.83
PTPRR-202ENST00000342084 FANCIQ9NVI1 1328 aa9.86□□□□□ -0.83
PTPRR-202ENST00000342084 ARHGEF5Q12774 1597 aa9.85□□□□□ -0.83
PTPRR-202ENST00000342084 CCDC141Q6ZP82 1450 aa9.85□□□□□ -0.83
PTPRR-202ENST00000342084 SYCP2Q9BX26 1530 aa9.85□□□□□ -0.83
PTPRR-202ENST00000342084 NBPF1Q3BBV0 1214 aa9.85□□□□□ -0.83
PTPRR-202ENST00000342084 PREX2Q70Z35 1606 aa9.85□□□□□ -0.83
PTPRR-202ENST00000342084 CLASP1Q7Z460 1538 aa9.84□□□□□ -0.83
PTPRR-202ENST00000342084 TTC37Q6PGP7 1564 aa9.84□□□□□ -0.83
PTPRR-202ENST00000342084 SENP3Q9H4L4 574 aaPredicted RBP9.84□□□□□ -0.83
PTPRR-202ENST00000342084 ARID4BQ4LE39 1312 aaPredicted RBP9.84□□□□□ -0.83
PTPRR-202ENST00000342084 ERCC6L2Q5T890 1561 aa9.83□□□□□ -0.84
PTPRR-202ENST00000342084 E9PCH4 1651 aa9.83□□□□□ -0.84
PTPRR-202ENST00000342084 ARHGAP5Q13017 1502 aa9.83□□□□□ -0.84
PTPRR-202ENST00000342084 CCDC144AA2RUR9 1427 aa9.82□□□□□ -0.84
PTPRR-202ENST00000342084 ABCC2Q92887 1545 aa9.82□□□□□ -0.84
PTPRR-202ENST00000342084 ERICH6Q7L0X2 663 aa9.82□□□□□ -0.84
PTPRR-202ENST00000342084 MYBBP1AQ9BQG0 1328 aaKnown RBP9.82□□□□□ -0.84
PTPRR-202ENST00000342084 TRPM1Q7Z4N2 1603 aa9.82□□□□□ -0.84
PTPRR-202ENST00000342084 PRAG1Q86YV5 1406 aa9.82□□□□□ -0.84
PTPRR-202ENST00000342084 PLA2R1Q13018 1463 aa9.82□□□□□ -0.84
PTPRR-202ENST00000342084 RNF123Q5XPI4 1314 aa9.81□□□□□ -0.84
PTPRR-202ENST00000342084 A2MP01023 1474 aa9.81□□□□□ -0.84
PTPRR-202ENST00000342084 CCDC136Q96JN2 1154 aa9.8□□□□□ -0.84
PTPRR-202ENST00000342084 LRPPRCP42704 1394 aaKnown RBP9.8□□□□□ -0.84
PTPRR-202ENST00000342084 PLEKHH2Q8IVE3 1493 aa9.8□□□□□ -0.84
PTPRR-202ENST00000342084 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.8□□□□□ -0.84
PTPRR-202ENST00000342084 DISP3Q9P2K9 1392 aa9.8□□□□□ -0.84
PTPRR-202ENST00000342084 BRD4O60885 1362 aaPredicted RBP9.79□□□□□ -0.84
PTPRR-202ENST00000342084 CC2D1BQ5T0F9 858 aaKnown RBP9.79□□□□□ -0.84
PTPRR-202ENST00000342084 UNC13BO14795 1591 aa9.79□□□□□ -0.84
PTPRR-202ENST00000342084 MAST1Q9Y2H9 1570 aa9.78□□□□□ -0.84
PTPRR-202ENST00000342084 UHRF1BP1LA0JNW5 1464 aa9.78□□□□□ -0.84
PTPRR-202ENST00000342084 RALBP1Q15311 655 aa9.78□□□□□ -0.84
PTPRR-202ENST00000342084 KTN1Q86UP2 1357 aaKnown RBP9.77□□□□□ -0.84
PTPRR-202ENST00000342084 MYO5CQ9NQX4 1742 aa9.77□□□□□ -0.84
PTPRR-202ENST00000342084 PARD3Q8TEW0 1356 aa9.76□□□□□ -0.85
PTPRR-202ENST00000342084 PER1O15534 1290 aaPredicted RBP9.76□□□□□ -0.85
PTPRR-202ENST00000342084 EXOC6Q8TAG9 804 aa9.76□□□□□ -0.85
PTPRR-202ENST00000342084 CDCA7LQ96GN5 454 aa9.76□□□□□ -0.85
PTPRR-202ENST00000342084 COL17A1Q9UMD9 1497 aaPredicted RBP9.76□□□□□ -0.85
PTPRR-202ENST00000342084 ZCCHC11Q5TAX3 1644 aaKnown RBP9.76□□□□□ -0.85
PTPRR-202ENST00000342084 RRP1P56182 461 aaKnown RBP9.75□□□□□ -0.85
PTPRR-202ENST00000342084 NLRP13Q86W25 1043 aa9.75□□□□□ -0.85
PTPRR-202ENST00000342084 TESK2Q96S53 571 aa9.75□□□□□ -0.85
PTPRR-202ENST00000342084 IQGAP3Q86VI3 1631 aa9.75□□□□□ -0.85
PTPRR-202ENST00000342084 PRDM15P57071 1507 aaPredicted RBP9.75□□□□□ -0.85
PTPRR-202ENST00000342084 PAK3O75914 559 aaPredicted RBP9.75□□□□□ -0.85
PTPRR-202ENST00000342084 NCBP3Q53F19 620 aaKnown RBP9.75□□□□□ -0.85
PTPRR-202ENST00000342084 RSPH4AQ5TD94 716 aa9.75□□□□□ -0.85
PTPRR-202ENST00000342084 PANK3Q9H999 370 aa9.75□□□□□ -0.85
PTPRR-202ENST00000342084 ERBINQ96RT1 1412 aa9.75□□□□□ -0.85
PTPRR-202ENST00000342084 ZBTB22O15209 634 aa9.74□□□□□ -0.85
PTPRR-202ENST00000342084 GPRASP1Q5JY77 1395 aa9.74□□□□□ -0.85
PTPRR-202ENST00000342084 PLXNC1O60486 1568 aa9.74□□□□□ -0.85
PTPRR-202ENST00000342084 RCAN3Q9UKA8 241 aa9.73□□□□□ -0.85
PTPRR-202ENST00000342084 TRAPPC8Q9Y2L5 1435 aa9.72□□□□□ -0.85
PTPRR-202ENST00000342084 PLIN1O60240 522 aa9.72□□□□□ -0.85
PTPRR-202ENST00000342084 BCL11AQ9H165 835 aa9.72□□□□□ -0.85
PTPRR-202ENST00000342084 DUOX2Q9NRD8 1548 aa9.72□□□□□ -0.85
PTPRR-202ENST00000342084 NOP58Q9Y2X3 529 aaKnown RBP9.72□□□□□ -0.85
PTPRR-202ENST00000342084 TMF1P82094 1093 aa9.7□□□□□ -0.86
PTPRR-202ENST00000342084 NBR1Q14596 966 aa9.7□□□□□ -0.86
PTPRR-202ENST00000342084 SKAP1Q86WV1 359 aa9.7□□□□□ -0.86
PTPRR-202ENST00000342084 LAMC1P11047 1609 aa9.7□□□□□ -0.86
PTPRR-202ENST00000342084 MAGI2Q86UL8 1455 aa9.7□□□□□ -0.86
PTPRR-202ENST00000342084 EIF2AK4Q9P2K8 1649 aaKnown RBP9.7□□□□□ -0.86
PTPRR-202ENST00000342084 ABCC1P33527 1531 aa9.7□□□□□ -0.86
PTPRR-202ENST00000342084 ARAP3Q8WWN8 1544 aa9.7□□□□□ -0.86
PTPRR-202ENST00000342084 AFAP1Q8N556 730 aa9.69□□□□□ -0.86
PTPRR-202ENST00000342084 PLCH2O75038 1416 aa9.69□□□□□ -0.86
PTPRR-202ENST00000342084 RNF17Q9BXT8 1623 aaKnown RBP9.69□□□□□ -0.86
PTPRR-202ENST00000342084 BLMP54132 1417 aaPredicted RBP9.68□□□□□ -0.86
PTPRR-202ENST00000342084 NPM2Q86SE8 214 aaKnown RBP9.68□□□□□ -0.86
PTPRR-202ENST00000342084 PPP6R1Q9UPN7 881 aa9.68□□□□□ -0.86
PTPRR-202ENST00000342084 EFCAB2Q5VUJ9 269 aa9.68□□□□□ -0.86
PTPRR-202ENST00000342084 ATP10AO60312 1499 aa9.67□□□□□ -0.86
PTPRR-202ENST00000342084 MADDQ8WXG6 1647 aa9.67□□□□□ -0.86
PTPRR-202ENST00000342084 ANP32AP39687 249 aaKnown RBP9.66□□□□□ -0.86
PTPRR-202ENST00000342084 CRBNQ96SW2 442 aa9.66□□□□□ -0.86
PTPRR-202ENST00000342084 ADAMTS8Q9UP79 889 aa9.66□□□□□ -0.86
PTPRR-202ENST00000342084 SPAG9O60271 1321 aaKnown RBP9.66□□□□□ -0.86
PTPRR-202ENST00000342084 WDR7Q9Y4E6 1490 aa9.66□□□□□ -0.86
PTPRR-202ENST00000342084 CLTCL1P53675 1640 aa9.65□□□□□ -0.86
PTPRR-202ENST00000342084 PDE3BQ13370 1112 aa9.65□□□□□ -0.86
PTPRR-202ENST00000342084 C20orf194Q5TEA3 1177 aa9.65□□□□□ -0.86
PTPRR-202ENST00000342084 PPP2R1AP30153 589 aa9.65□□□□□ -0.87
PTPRR-202ENST00000342084 IPO9Q96P70 1041 aaKnown RBP9.65□□□□□ -0.87
PTPRR-202ENST00000342084 IQGAP1P46940 1657 aa9.64□□□□□ -0.87
PTPRR-202ENST00000342084 MYT1LQ9UL68 1186 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms