RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 PLEKHH2Q8IVE3 1493 aa25.06■■□□□ 1.6
SEMA6C-201ENST00000341697 B4GALNT3Q6L9W6 998 aa25.06■■□□□ 1.6
SEMA6C-201ENST00000341697 MIA2Q96PC5 1412 aa25.05■■□□□ 1.6
SEMA6C-201ENST00000341697 CGNL1Q0VF96 1302 aa25.05■■□□□ 1.6
SEMA6C-201ENST00000341697 RCAN3Q9UKA8 241 aa25.04■■□□□ 1.6
SEMA6C-201ENST00000341697 NBR1Q14596 966 aa25.04■■□□□ 1.6
SEMA6C-201ENST00000341697 MYBBP1AQ9BQG0 1328 aaKnown RBP25.04■■□□□ 1.6
SEMA6C-201ENST00000341697 RRBP1Q9P2E9 1410 aaKnown RBP25.03■■□□□ 1.6
SEMA6C-201ENST00000341697 COG3Q96JB2 828 aa25.02■■□□□ 1.6
SEMA6C-201ENST00000341697 CCDC9Q9Y3X0 531 aaKnown RBP25.01■■□□□ 1.59
SEMA6C-201ENST00000341697 LMOD3Q0VAK6 560 aa25.01■■□□□ 1.59
SEMA6C-201ENST00000341697 GOLGA2Q08379 1002 aa25.01■■□□□ 1.59
SEMA6C-201ENST00000341697 UNC13AQ9UPW8 1703 aa25.01■■□□□ 1.59
SEMA6C-201ENST00000341697 CCDC146Q8IYE0 955 aa25.01■■□□□ 1.59
SEMA6C-201ENST00000341697 LTV1Q96GA3 475 aaPredicted RBP25■■□□□ 1.59
SEMA6C-201ENST00000341697 IQGAP2Q13576 1575 aa24.99■■□□□ 1.59
SEMA6C-201ENST00000341697 C9orf84Q5VXU9 1444 aa24.98■■□□□ 1.59
SEMA6C-201ENST00000341697 STK31Q9BXU1 1019 aa24.98■■□□□ 1.59
SEMA6C-201ENST00000341697 CENPJQ9HC77 1338 aaPredicted RBP24.97■■□□□ 1.59
SEMA6C-201ENST00000341697 NCLP19338 710 aaKnown RBP24.97■■□□□ 1.59
SEMA6C-201ENST00000341697 MAGI1Q96QZ7 1491 aaPredicted RBP24.97■■□□□ 1.59
SEMA6C-201ENST00000341697 CUL7Q14999 1698 aa24.96■■□□□ 1.59
SEMA6C-201ENST00000341697 TIAM1Q13009 1591 aa24.95■■□□□ 1.58
SEMA6C-201ENST00000341697 PDE3BQ13370 1112 aa24.95■■□□□ 1.58
SEMA6C-201ENST00000341697 SCAPERQ9BY12 1400 aa24.95■■□□□ 1.58
SEMA6C-201ENST00000341697 URB2Q14146 1524 aaKnown RBP24.95■■□□□ 1.58
SEMA6C-201ENST00000341697 GOLGA6L22H0YM25 854 aa24.95■■□□□ 1.58
SEMA6C-201ENST00000341697 ZNF330Q9Y3S2 320 aaPredicted RBP24.93■■□□□ 1.58
SEMA6C-201ENST00000341697 PRKRIP1Q9H875 184 aaPredicted RBP24.92■■□□□ 1.58
SEMA6C-201ENST00000341697 GRIN2AQ12879 1464 aa24.92■■□□□ 1.58
SEMA6C-201ENST00000341697 ITPRIPQ8IWB1 547 aa24.92■■□□□ 1.58
SEMA6C-201ENST00000341697 EPRSP07814 1512 aaKnown RBP24.91■■□□□ 1.58
SEMA6C-201ENST00000341697 KCNJ4P48050 445 aa24.91■■□□□ 1.58
SEMA6C-201ENST00000341697 SMC4Q9NTJ3 1288 aa24.91■■□□□ 1.58
SEMA6C-201ENST00000341697 ERICH6BQ5W0A0 696 aa24.89■■□□□ 1.57
SEMA6C-201ENST00000341697 CDK13Q14004 1512 aaKnown RBP24.87■■□□□ 1.57
SEMA6C-201ENST00000341697 HFM1A2PYH4 1435 aa24.87■■□□□ 1.57
SEMA6C-201ENST00000341697 RAPGEF3O95398 923 aa24.86■■□□□ 1.57
SEMA6C-201ENST00000341697 RWDD1Q9H446 243 aaPredicted RBP24.85■■□□□ 1.57
SEMA6C-201ENST00000341697 SUPT6HQ7KZ85 1726 aaKnown RBP24.85■■□□□ 1.57
SEMA6C-201ENST00000341697 FGD1P98174 961 aa24.85■■□□□ 1.57
SEMA6C-201ENST00000341697 PSME1Q06323 249 aa24.84■■□□□ 1.57
SEMA6C-201ENST00000341697 TMEM132EQ6IEE7 984 aa24.83■■□□□ 1.57
SEMA6C-201ENST00000341697 CFAP44Q96MT7 982 aa24.83■■□□□ 1.57
SEMA6C-201ENST00000341697 RRP7AQ9Y3A4 280 aaKnown RBP24.83■■□□□ 1.57
SEMA6C-201ENST00000341697 ANP32EQ9BTT0 268 aa24.83■■□□□ 1.56
SEMA6C-201ENST00000341697 APBB1O00213 710 aa24.82■■□□□ 1.56
SEMA6C-201ENST00000341697 DAPK1P53355 1430 aa24.82■■□□□ 1.56
SEMA6C-201ENST00000341697 HDAC5Q9UQL6 1122 aa24.82■■□□□ 1.56
SEMA6C-201ENST00000341697 ZNF608Q9ULD9 1512 aaPredicted RBP24.8■■□□□ 1.56
SEMA6C-201ENST00000341697 KIAA1107Q9UPP5 1409 aa24.79■■□□□ 1.56
SEMA6C-201ENST00000341697 CFAP70Q5T0N1 1121 aa24.79■■□□□ 1.56
SEMA6C-201ENST00000341697 TXNDC2Q86VQ3 553 aa24.79■■□□□ 1.56
SEMA6C-201ENST00000341697 KIF7Q2M1P5 1343 aa24.78■■□□□ 1.56
SEMA6C-201ENST00000341697 CCDC7Q96M83 1385 aa24.78■■□□□ 1.56
SEMA6C-201ENST00000341697 PLB1Q6P1J6 1458 aa24.78■■□□□ 1.56
SEMA6C-201ENST00000341697 EVA1CP58658 441 aa24.77■■□□□ 1.56
SEMA6C-201ENST00000341697 DIAPH1O60610 1272 aaKnown RBP24.77■■□□□ 1.56
SEMA6C-201ENST00000341697 SLC52A1Q9NWF4 448 aa24.77■■□□□ 1.56
SEMA6C-201ENST00000341697 ATF3P18847 181 aa24.77■■□□□ 1.56
SEMA6C-201ENST00000341697 C1orf141Q5JVX7 400 aa24.77■■□□□ 1.56
SEMA6C-201ENST00000341697 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.76■■□□□ 1.55
SEMA6C-201ENST00000341697 MCCP23508 829 aa24.76■■□□□ 1.55
SEMA6C-201ENST00000341697 PMFBP1Q8TBY8 1022 aa24.76■■□□□ 1.55
SEMA6C-201ENST00000341697 HSP90AB1P08238 724 aaKnown RBP24.76■■□□□ 1.55
SEMA6C-201ENST00000341697 CLUAP1Q96AJ1 413 aa24.75■■□□□ 1.55
SEMA6C-201ENST00000341697 SLC4A10Q6U841 1118 aa24.75■■□□□ 1.55
SEMA6C-201ENST00000341697 BIVM-ERCC5R4GMW8 1640 aa24.74■■□□□ 1.55
SEMA6C-201ENST00000341697 ARHGEF11O15085 1522 aa24.74■■□□□ 1.55
SEMA6C-201ENST00000341697 CABP2Q9NPB3 220 aa24.73■■□□□ 1.55
SEMA6C-201ENST00000341697 PCF11O94913 1555 aaKnown RBP24.73■■□□□ 1.55
SEMA6C-201ENST00000341697 THEMISQ8N1K5 641 aaPredicted RBP24.73■■□□□ 1.55
SEMA6C-201ENST00000341697 HMMRO75330 724 aa24.73■■□□□ 1.55
SEMA6C-201ENST00000341697 ZRSR1Q15695 479 aaKnown RBP24.71■■□□□ 1.55
SEMA6C-201ENST00000341697 CD109Q6YHK3 1445 aa24.71■■□□□ 1.55
SEMA6C-201ENST00000341697 E9PSI1 815 aa24.71■■□□□ 1.55
SEMA6C-201ENST00000341697 NAP1L2Q9ULW6 460 aaPredicted RBP24.71■■□□□ 1.55
SEMA6C-201ENST00000341697 TEFQ10587 303 aa24.7■■□□□ 1.54
SEMA6C-201ENST00000341697 AEBP2Q6ZN18 517 aaPredicted RBP24.69■■□□□ 1.54
SEMA6C-201ENST00000341697 POGZQ7Z3K3 1410 aa24.69■■□□□ 1.54
SEMA6C-201ENST00000341697 APAF1O14727 1248 aa24.69■■□□□ 1.54
SEMA6C-201ENST00000341697 CHMP3Q9Y3E7 222 aa24.68■■□□□ 1.54
SEMA6C-201ENST00000341697 CCDC141Q6ZP82 1450 aa24.68■■□□□ 1.54
SEMA6C-201ENST00000341697 ROCK1Q13464 1354 aa24.68■■□□□ 1.54
SEMA6C-201ENST00000341697 HSCBQ8IWL3 235 aa24.67■■□□□ 1.54
SEMA6C-201ENST00000341697 NGEFQ8N5V2 710 aa24.67■■□□□ 1.54
SEMA6C-201ENST00000341697 KIAA1211Q6ZU35 1233 aa24.67■■□□□ 1.54
SEMA6C-201ENST00000341697 TAF7LQ5H9L4 462 aa24.66■■□□□ 1.54
SEMA6C-201ENST00000341697 ELL2O00472 640 aaPredicted RBP24.66■■□□□ 1.54
SEMA6C-201ENST00000341697 GGNBP2Q9H3C7 697 aa24.65■■□□□ 1.54
SEMA6C-201ENST00000341697 TAOK2Q9UL54 1235 aa24.65■■□□□ 1.54
SEMA6C-201ENST00000341697 NBPF1Q3BBV0 1214 aa24.64■■□□□ 1.54
SEMA6C-201ENST00000341697 ZBED9Q6R2W3 1325 aa24.63■■□□□ 1.53
SEMA6C-201ENST00000341697 TPRNQ4KMQ1 711 aa24.63■■□□□ 1.53
SEMA6C-201ENST00000341697 PRAM1Q96QH2 718 aa24.63■■□□□ 1.53
SEMA6C-201ENST00000341697 GORABQ5T7V8 394 aa24.63■■□□□ 1.53
SEMA6C-201ENST00000341697 TMX4Q9H1E5 349 aaPredicted RBP24.63■■□□□ 1.53
SEMA6C-201ENST00000341697 KIF14Q15058 1648 aa24.62■■□□□ 1.53
SEMA6C-201ENST00000341697 CNTLNQ9NXG0 1405 aa24.62■■□□□ 1.53
SEMA6C-201ENST00000341697 RPGRIP1LQ68CZ1 1315 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms