RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 RWDD1Q9H446 243 aaPredicted RBP15.84■□□□□ 0.13
USP47-202ENST00000339865 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.84■□□□□ 0.13
USP47-202ENST00000339865 CWC15Q9P013 229 aaKnown RBP15.84■□□□□ 0.13
USP47-202ENST00000339865 HSP90B2PQ58FF3 399 aa15.84■□□□□ 0.13
USP47-202ENST00000339865 TCEAL9Q9UHQ7 104 aa15.84■□□□□ 0.13
USP47-202ENST00000339865 CDR1P51861 262 aa15.84■□□□□ 0.13
USP47-202ENST00000339865 FBXW7Q969H0 707 aa15.83■□□□□ 0.13
USP47-202ENST00000339865 FRAT2O75474 233 aaPredicted RBP15.83■□□□□ 0.12
USP47-202ENST00000339865 TOMM22Q9NS69 142 aa15.83■□□□□ 0.12
USP47-202ENST00000339865 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.82■□□□□ 0.12
USP47-202ENST00000339865 GTF2E1P29083 439 aaPredicted RBP15.82■□□□□ 0.12
USP47-202ENST00000339865 SKIDA1Q1XH10 827 aa15.82■□□□□ 0.12
USP47-202ENST00000339865 KIF3AQ9Y496 699 aa15.82■□□□□ 0.12
USP47-202ENST00000339865 NAP1L1P55209 391 aaKnown RBP15.82■□□□□ 0.12
USP47-202ENST00000339865 DCTN1Q14203 1278 aa15.82■□□□□ 0.12
USP47-202ENST00000339865 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.82■□□□□ 0.122e-6■■■■■ 96.1
USP47-202ENST00000339865 FAM184AQ8NB25 1140 aa15.81■□□□□ 0.12
USP47-202ENST00000339865 RCAN3Q9UKA8 241 aa15.8■□□□□ 0.12
USP47-202ENST00000339865 DHX37Q8IY37 1157 aaKnown RBP15.8■□□□□ 0.12
USP47-202ENST00000339865 ACBD3Q9H3P7 528 aa15.8■□□□□ 0.12
USP47-202ENST00000339865 MCTP1Q6DN14 999 aa15.79■□□□□ 0.12
USP47-202ENST00000339865 PMFBP1Q8TBY8 1022 aa15.79■□□□□ 0.12
USP47-202ENST00000339865 ARGLU1Q9NWB6 273 aaPredicted RBP15.79■□□□□ 0.12
USP47-202ENST00000339865 ODF2Q5BJF6 829 aa15.78■□□□□ 0.12
USP47-202ENST00000339865 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.78■□□□□ 0.12
USP47-202ENST00000339865 FAM43AQ8N2R8 423 aa15.77■□□□□ 0.12
USP47-202ENST00000339865 PAF1Q8N7H5 531 aa15.77■□□□□ 0.11
USP47-202ENST00000339865 CCDC66A2RUB6 948 aa15.77■□□□□ 0.11
USP47-202ENST00000339865 DYDC1Q8WWB3 177 aa15.77■□□□□ 0.11
USP47-202ENST00000339865 MAPK8IP2Q13387 824 aaPredicted RBP15.76■□□□□ 0.11
USP47-202ENST00000339865 TSPYL1Q9H0U9 437 aa15.76■□□□□ 0.11
USP47-202ENST00000339865 MNS1Q8NEH6 495 aa15.76■□□□□ 0.11
USP47-202ENST00000339865 CHMP7Q8WUX9 453 aaPredicted RBP15.76■□□□□ 0.11
USP47-202ENST00000339865 IFT57Q9NWB7 429 aa15.76■□□□□ 0.11
USP47-202ENST00000339865 CT47A1Q5JQC4 288 aaPredicted RBP15.75■□□□□ 0.11
USP47-202ENST00000339865 ANKRD20A12PQ8NF67 263 aa15.75■□□□□ 0.11
USP47-202ENST00000339865 TRIM34Q9BYJ4 488 aa15.75■□□□□ 0.11
USP47-202ENST00000339865 SKOR2Q2VWA4 1001 aaPredicted RBP15.75■□□□□ 0.11
USP47-202ENST00000339865 AKAP17AQ02040 695 aaKnown RBP15.75■□□□□ 0.11
USP47-202ENST00000339865 ATP6V1DQ9Y5K8 247 aa15.74■□□□□ 0.11
USP47-202ENST00000339865 SLC4A3P48751 1232 aa15.74■□□□□ 0.11
USP47-202ENST00000339865 TSHZ2Q9NRE2 1034 aa15.74■□□□□ 0.11
USP47-202ENST00000339865 CCDC180Q9P1Z9 1646 aa15.73■□□□□ 0.11
USP47-202ENST00000339865 MORC1Q86VD1 984 aa15.73■□□□□ 0.11
USP47-202ENST00000339865 SLC4A10Q6U841 1118 aa15.73■□□□□ 0.11
USP47-202ENST00000339865 SRPK2P78362 688 aaKnown RBP15.73■□□□□ 0.11
USP47-202ENST00000339865 ZFYVE27Q5T4F4 411 aa15.72■□□□□ 0.11
USP47-202ENST00000339865 HSP90AB2PQ58FF8 381 aa15.72■□□□□ 0.11
USP47-202ENST00000339865 LEKR1Q6ZMV7 388 aa15.71■□□□□ 0.11
USP47-202ENST00000339865 ABCC9O60706 1549 aa15.71■□□□□ 0.11
USP47-202ENST00000339865 TMF1P82094 1093 aa15.71■□□□□ 0.1
USP47-202ENST00000339865 RILPL2Q969X0 211 aa15.71■□□□□ 0.1
USP47-202ENST00000339865 CCAR1Q8IX12 1150 aaKnown RBP15.7■□□□□ 0.1
USP47-202ENST00000339865 SMC4Q9NTJ3 1288 aa15.7■□□□□ 0.1
USP47-202ENST00000339865 R3HCC1Q9Y3T6 440 aaKnown RBP15.7■□□□□ 0.1
USP47-202ENST00000339865 TTLL5Q6EMB2 1281 aa15.7■□□□□ 0.1
USP47-202ENST00000339865 CAGE1Q8TC20 777 aa15.7■□□□□ 0.1
USP47-202ENST00000339865 NEFHP12036 1026 aa15.69■□□□□ 0.1
USP47-202ENST00000339865 CCDC173Q0VFZ6 552 aa15.68■□□□□ 0.1
USP47-202ENST00000339865 SAFB2Q14151 953 aaKnown RBP eCLIP15.68■□□□□ 0.19e-7■■■■□ 22.3
USP47-202ENST00000339865 HOOK1Q9UJC3 728 aaKnown RBP15.68■□□□□ 0.1
USP47-202ENST00000339865 ZRSR2Q15696 482 aaKnown RBP15.68■□□□□ 0.1
USP47-202ENST00000339865 NEXNQ0ZGT2 675 aa15.67■□□□□ 0.1
USP47-202ENST00000339865 AXDND1Q5T1B0 1012 aaPredicted RBP15.67■□□□□ 0.1
USP47-202ENST00000339865 MTERF4Q7Z6M4 381 aaKnown RBP15.67■□□□□ 0.1
USP47-202ENST00000339865 CLUAP1Q96AJ1 413 aa15.67■□□□□ 0.1
USP47-202ENST00000339865 IBSPP21815 317 aaPredicted RBP15.67■□□□□ 0.1
USP47-202ENST00000339865 DIAPH3Q9NSV4 1193 aa15.67■□□□□ 0.1
USP47-202ENST00000339865 BICD2Q8TD16 824 aa15.66■□□□□ 0.1
USP47-202ENST00000339865 STK31Q9BXU1 1019 aa15.66■□□□□ 0.1
USP47-202ENST00000339865 SASS6Q6UVJ0 657 aa15.65■□□□□ 0.1
USP47-202ENST00000339865 EPS15P42566 896 aa15.65■□□□□ 0.1
USP47-202ENST00000339865 SIN3AQ96ST3 1273 aa15.65■□□□□ 0.1
USP47-202ENST00000339865 EVA1CP58658 441 aa15.65■□□□□ 0.1
USP47-202ENST00000339865 CCDC47Q96A33 483 aaKnown RBP15.64■□□□□ 0.09
USP47-202ENST00000339865 U2AF1L5P0DN76 240 aaPredicted RBP15.64■□□□□ 0.09
USP47-202ENST00000339865 U2AF1Q01081 240 aaKnown RBP eCLIP15.64■□□□□ 0.09
USP47-202ENST00000339865 TRIM29Q14134 588 aa15.64■□□□□ 0.09
USP47-202ENST00000339865 TAF3Q5VWG9 929 aa15.64■□□□□ 0.09
USP47-202ENST00000339865 CLASRPQ8N2M8 674 aaKnown RBP15.64■□□□□ 0.09
USP47-202ENST00000339865 MYO6Q9UM54 1294 aa15.64■□□□□ 0.09
USP47-202ENST00000339865 SPAG9O60271 1321 aaKnown RBP15.63■□□□□ 0.09
USP47-202ENST00000339865 ANKRD62A6NC57 917 aa15.63■□□□□ 0.09
USP47-202ENST00000339865 CT47B1P0C2W7 299 aaPredicted RBP15.63■□□□□ 0.09
USP47-202ENST00000339865 KIAA0754O94854 1291 aa15.62■□□□□ 0.09
USP47-202ENST00000339865 SYNE3Q6ZMZ3 975 aa15.62■□□□□ 0.09
USP47-202ENST00000339865 PAXIP1Q6ZW49 1069 aaPredicted RBP15.62■□□□□ 0.09
USP47-202ENST00000339865 PDILTQ8N807 584 aa15.62■□□□□ 0.09
USP47-202ENST00000339865 ERCC4Q92889 916 aaPredicted RBP15.62■□□□□ 0.09
USP47-202ENST00000339865 DCAF11Q8TEB1 546 aa15.62■□□□□ 0.09
USP47-202ENST00000339865 RBM10P98175 930 aaKnown RBP15.61■□□□□ 0.09
USP47-202ENST00000339865 ENOX2Q16206 610 aaKnown RBP15.61■□□□□ 0.09
USP47-202ENST00000339865 SEPT7Q16181 437 aaKnown RBP15.61■□□□□ 0.09
USP47-202ENST00000339865 CENPHQ9H3R5 247 aa15.61■□□□□ 0.09
USP47-202ENST00000339865 SF3B2Q13435 895 aaKnown RBP15.6■□□□□ 0.09
USP47-202ENST00000339865 INCENPQ9NQS7 918 aa15.6■□□□□ 0.09
USP47-202ENST00000339865 OFD1O75665 1012 aa15.6■□□□□ 0.09
USP47-202ENST00000339865 DEF6Q9H4E7 631 aa15.6■□□□□ 0.09
USP47-202ENST00000339865 PLCD3Q8N3E9 789 aa15.6■□□□□ 0.09
USP47-202ENST00000339865 KTN1Q86UP2 1357 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms