RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 PLB1Q6P1J6 1458 aa14.36□□□□□ -0.11
SEMA4D-201ENST00000339861 MORC1Q86VD1 984 aa14.36□□□□□ -0.11
SEMA4D-201ENST00000339861 SLKQ9H2G2 1235 aaPredicted RBP14.36□□□□□ -0.11
SEMA4D-201ENST00000339861 HSP90AA1P07900 732 aaKnown RBP14.36□□□□□ -0.11
SEMA4D-201ENST00000339861 PDE3BQ13370 1112 aa14.36□□□□□ -0.11
SEMA4D-201ENST00000339861 EFCAB2Q5VUJ9 269 aa14.36□□□□□ -0.11
SEMA4D-201ENST00000339861 STK26Q9P289 416 aa14.35□□□□□ -0.11
SEMA4D-201ENST00000339861 HECW1Q76N89 1606 aa14.35□□□□□ -0.11
SEMA4D-201ENST00000339861 FTSJ3Q8IY81 847 aaKnown RBP14.34□□□□□ -0.11
SEMA4D-201ENST00000339861 TRAK1Q9UPV9 953 aa14.34□□□□□ -0.11
SEMA4D-201ENST00000339861 CUL7Q14999 1698 aa14.34□□□□□ -0.11
SEMA4D-201ENST00000339861 ZNF608Q9ULD9 1512 aaPredicted RBP14.34□□□□□ -0.11
SEMA4D-201ENST00000339861 RPRD2Q5VT52 1461 aaKnown RBP14.33□□□□□ -0.11
SEMA4D-201ENST00000339861 TROQ12816 1431 aaPredicted RBP14.33□□□□□ -0.12
SEMA4D-201ENST00000339861 SMG6Q86US8 1419 aaKnown RBP14.32□□□□□ -0.12
SEMA4D-201ENST00000339861 IQGAP2Q13576 1575 aa14.32□□□□□ -0.12
SEMA4D-201ENST00000339861 SPAG9O60271 1321 aaKnown RBP14.32□□□□□ -0.12
SEMA4D-201ENST00000339861 CFAP43Q8NDM7 1665 aa14.32□□□□□ -0.12
SEMA4D-201ENST00000339861 C9orf84Q5VXU9 1444 aa14.32□□□□□ -0.12
SEMA4D-201ENST00000339861 AFAP1Q8N556 730 aa14.31□□□□□ -0.12
SEMA4D-201ENST00000339861 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.31□□□□□ -0.12
SEMA4D-201ENST00000339861 CFAP53Q96M91 514 aa14.31□□□□□ -0.12
SEMA4D-201ENST00000339861 BRD4O60885 1362 aaPredicted RBP14.31□□□□□ -0.12
SEMA4D-201ENST00000339861 C20orf194Q5TEA3 1177 aa14.31□□□□□ -0.12
SEMA4D-201ENST00000339861 COG6Q9Y2V7 657 aa14.31□□□□□ -0.12
SEMA4D-201ENST00000339861 UGGT2Q9NYU1 1516 aa14.31□□□□□ -0.12
SEMA4D-201ENST00000339861 U2AF1L5P0DN76 240 aaPredicted RBP14.3□□□□□ -0.12
SEMA4D-201ENST00000339861 U2AF1Q01081 240 aaKnown RBP eCLIP14.3□□□□□ -0.12
SEMA4D-201ENST00000339861 ROCK1Q13464 1354 aa14.29□□□□□ -0.12
SEMA4D-201ENST00000339861 BECN1Q14457 450 aa14.29□□□□□ -0.12
SEMA4D-201ENST00000339861 RSPH4AQ5TD94 716 aa14.28□□□□□ -0.12
SEMA4D-201ENST00000339861 ARHGEF11O15085 1522 aa14.28□□□□□ -0.12
SEMA4D-201ENST00000339861 ARID4BQ4LE39 1312 aaPredicted RBP14.27□□□□□ -0.12
SEMA4D-201ENST00000339861 CAMSAP2Q08AD1 1489 aa14.27□□□□□ -0.12
SEMA4D-201ENST00000339861 SRPK2P78362 688 aaKnown RBP14.27□□□□□ -0.12
SEMA4D-201ENST00000339861 MAGI3Q5TCQ9 1506 aa14.26□□□□□ -0.13
SEMA4D-201ENST00000339861 CFAP70Q5T0N1 1121 aa14.25□□□□□ -0.13
SEMA4D-201ENST00000339861 BCAR3O75815 825 aa14.25□□□□□ -0.13
SEMA4D-201ENST00000339861 PPP2R1AP30153 589 aa14.25□□□□□ -0.13
SEMA4D-201ENST00000339861 PLEKHG5O94827 1062 aa14.24□□□□□ -0.13
SEMA4D-201ENST00000339861 PANK1Q8TE04 598 aa14.24□□□□□ -0.13
SEMA4D-201ENST00000339861 POGKQ9P215 609 aa14.24□□□□□ -0.13
SEMA4D-201ENST00000339861 KANK1Q14678 1352 aa14.24□□□□□ -0.13
SEMA4D-201ENST00000339861 GZF1Q9H116 711 aaPredicted RBP14.24□□□□□ -0.13
SEMA4D-201ENST00000339861 KIAA0586Q9BVV6 1533 aa14.24□□□□□ -0.13
SEMA4D-201ENST00000339861 MAPK8IP3Q9UPT6 1336 aa14.24□□□□□ -0.13
SEMA4D-201ENST00000339861 MRC2Q9UBG0 1479 aa14.24□□□□□ -0.13
SEMA4D-201ENST00000339861 CENPJQ9HC77 1338 aaPredicted RBP14.24□□□□□ -0.13
SEMA4D-201ENST00000339861 CENPQQ7L2Z9 268 aaPredicted RBP14.23□□□□□ -0.13
SEMA4D-201ENST00000339861 IL27Q8NEV9 243 aa14.23□□□□□ -0.13
SEMA4D-201ENST00000339861 BACH2Q9BYV9 841 aa14.23□□□□□ -0.13
SEMA4D-201ENST00000339861 KDM6BO15054 1643 aa14.23□□□□□ -0.13
SEMA4D-201ENST00000339861 CTTNBP2Q8WZ74 1663 aa14.23□□□□□ -0.13
SEMA4D-201ENST00000339861 TMEM132EQ6IEE7 984 aa14.22□□□□□ -0.13
SEMA4D-201ENST00000339861 FAM161AQ3B820 660 aa14.22□□□□□ -0.13
SEMA4D-201ENST00000339861 LAMC3Q9Y6N6 1575 aa14.22□□□□□ -0.13
SEMA4D-201ENST00000339861 SOX12O15370 315 aa14.21□□□□□ -0.14
SEMA4D-201ENST00000339861 MS4A1P11836 297 aa14.2□□□□□ -0.14
SEMA4D-201ENST00000339861 NUP153P49790 1475 aaKnown RBP14.19□□□□□ -0.14
SEMA4D-201ENST00000339861 ITPRIPQ8IWB1 547 aa14.19□□□□□ -0.14
SEMA4D-201ENST00000339861 DHX29Q7Z478 1369 aaKnown RBP14.19□□□□□ -0.14
SEMA4D-201ENST00000339861 GPATCH8Q9UKJ3 1502 aaKnown RBP14.19□□□□□ -0.14
SEMA4D-201ENST00000339861 MFAP1P55081 439 aaKnown RBP14.18□□□□□ -0.14
SEMA4D-201ENST00000339861 IFT140Q96RY7 1462 aa14.18□□□□□ -0.14
SEMA4D-201ENST00000339861 MLECQ14165 292 aa14.18□□□□□ -0.14
SEMA4D-201ENST00000339861 NFKBIBQ15653 356 aa14.17□□□□□ -0.14
SEMA4D-201ENST00000339861 SMC4Q9NTJ3 1288 aa14.17□□□□□ -0.14
SEMA4D-201ENST00000339861 ARHGAP5Q13017 1502 aa14.17□□□□□ -0.14
SEMA4D-201ENST00000339861 DISP3Q9P2K9 1392 aa14.17□□□□□ -0.14
SEMA4D-201ENST00000339861 ELL2O00472 640 aaPredicted RBP14.16□□□□□ -0.14
SEMA4D-201ENST00000339861 ESF1Q9H501 851 aaKnown RBP14.16□□□□□ -0.14
SEMA4D-201ENST00000339861 E9PSI1 815 aa14.16□□□□□ -0.14
SEMA4D-201ENST00000339861 APBB1O00213 710 aa14.16□□□□□ -0.14
SEMA4D-201ENST00000339861 GRIN2AQ12879 1464 aa14.15□□□□□ -0.14
SEMA4D-201ENST00000339861 TCOF1Q13428 1488 aaKnown RBP14.15□□□□□ -0.14
SEMA4D-201ENST00000339861 SLC12A5Q9H2X9 1139 aa14.15□□□□□ -0.14
SEMA4D-201ENST00000339861 TPRNQ4KMQ1 711 aa14.15□□□□□ -0.14
SEMA4D-201ENST00000339861 ERBINQ96RT1 1412 aa14.15□□□□□ -0.14
SEMA4D-201ENST00000339861 EIF3AQ14152 1382 aaKnown RBP14.14□□□□□ -0.15
SEMA4D-201ENST00000339861 GSE1Q14687 1217 aa14.14□□□□□ -0.15
SEMA4D-201ENST00000339861 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
SEMA4D-201ENST00000339861 BRPF3Q9ULD4 1205 aa14.14□□□□□ -0.15
SEMA4D-201ENST00000339861 MAGI1Q96QZ7 1491 aaPredicted RBP14.13□□□□□ -0.15
SEMA4D-201ENST00000339861 WASHC2CQ9Y4E1 1318 aa14.13□□□□□ -0.15
SEMA4D-201ENST00000339861 SYNJ2O15056 1496 aa14.13□□□□□ -0.15
SEMA4D-201ENST00000339861 FRAT2O75474 233 aaPredicted RBP14.13□□□□□ -0.15
SEMA4D-201ENST00000339861 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.13□□□□□ -0.15
SEMA4D-201ENST00000339861 PZPP20742 1482 aa14.13□□□□□ -0.15
SEMA4D-201ENST00000339861 TEX14Q8IWB6 1497 aa14.13□□□□□ -0.15
SEMA4D-201ENST00000339861 MYH16Q9H6N6 1097 aa14.12□□□□□ -0.15
SEMA4D-201ENST00000339861 RWDD1Q9H446 243 aaPredicted RBP14.12□□□□□ -0.15
SEMA4D-201ENST00000339861 NCLP19338 710 aaKnown RBP14.11□□□□□ -0.15
SEMA4D-201ENST00000339861 MTHFSP49914 203 aa14.11□□□□□ -0.15
SEMA4D-201ENST00000339861 TCP11L2Q8N4U5 519 aa14.1□□□□□ -0.15
SEMA4D-201ENST00000339861 WDR62O43379 1518 aa14.1□□□□□ -0.15
SEMA4D-201ENST00000339861 MINK1Q8N4C8 1332 aaPredicted RBP14.1□□□□□ -0.15
SEMA4D-201ENST00000339861 GGNBP2Q9H3C7 697 aa14.09□□□□□ -0.15
SEMA4D-201ENST00000339861 CABP2Q9NPB3 220 aa14.09□□□□□ -0.15
SEMA4D-201ENST00000339861 USP35Q9P2H5 1018 aa14.09□□□□□ -0.15
SEMA4D-201ENST00000339861 PLEKHH2Q8IVE3 1493 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms