RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 HDAC5Q9UQL6 1122 aa15.59■□□□□ 0.09
BRPF3-201ENST00000339717 TPM4P67936 248 aa15.59■□□□□ 0.09
BRPF3-201ENST00000339717 RRP1P56182 461 aaKnown RBP15.58■□□□□ 0.08
BRPF3-201ENST00000339717 GIMAP7Q8NHV1 300 aa15.58■□□□□ 0.08
BRPF3-201ENST00000339717 VGLL3A8MV65 326 aa15.57■□□□□ 0.08
BRPF3-201ENST00000339717 PMFBP1Q8TBY8 1022 aa15.57■□□□□ 0.08
BRPF3-201ENST00000339717 MCM5P33992 734 aa15.57■□□□□ 0.08
BRPF3-201ENST00000339717 TERF1P54274 439 aa15.57■□□□□ 0.08
BRPF3-201ENST00000339717 MNS1Q8NEH6 495 aa15.57■□□□□ 0.08
BRPF3-201ENST00000339717 KTN1Q86UP2 1357 aaKnown RBP15.57■□□□□ 0.08
BRPF3-201ENST00000339717 TDO2P48775 406 aa15.56■□□□□ 0.08
BRPF3-201ENST00000339717 CLIP1P30622 1438 aa15.56■□□□□ 0.08
BRPF3-201ENST00000339717 ARID3CA6NKF2 412 aa15.56■□□□□ 0.08
BRPF3-201ENST00000339717 ERICH4A6NGS2 130 aa15.55■□□□□ 0.08
BRPF3-201ENST00000339717 TPRNQ4KMQ1 711 aa15.55■□□□□ 0.08
BRPF3-201ENST00000339717 UTP14CQ5TAP6 766 aaKnown RBP15.55■□□□□ 0.08
BRPF3-201ENST00000339717 SIN3AQ96ST3 1273 aa15.55■□□□□ 0.08
BRPF3-201ENST00000339717 PAIP2Q9BPZ3 127 aaKnown RBP15.55■□□□□ 0.08
BRPF3-201ENST00000339717 ACBD3Q9H3P7 528 aa15.55■□□□□ 0.08
BRPF3-201ENST00000339717 RWDD1Q9H446 243 aaPredicted RBP15.55■□□□□ 0.08
BRPF3-201ENST00000339717 EXOC6Q8TAG9 804 aa15.54■□□□□ 0.08
BRPF3-201ENST00000339717 POGKQ9P215 609 aa15.54■□□□□ 0.08
BRPF3-201ENST00000339717 MFAP1P55081 439 aaKnown RBP15.54■□□□□ 0.08
BRPF3-201ENST00000339717 TNIKQ9UKE5 1360 aa15.53■□□□□ 0.08
BRPF3-201ENST00000339717 H0YHG0 523 aa15.53■□□□□ 0.08
BRPF3-201ENST00000339717 CAVIN1Q6NZI2 390 aaKnown RBP15.52■□□□□ 0.08
BRPF3-201ENST00000339717 NOC3LQ8WTT2 800 aaKnown RBP15.52■□□□□ 0.08
BRPF3-201ENST00000339717 NEFHP12036 1026 aa15.52■□□□□ 0.07
BRPF3-201ENST00000339717 ZNF592Q92610 1267 aa15.51■□□□□ 0.07
BRPF3-201ENST00000339717 ZNF526Q8TF50 670 aaPredicted RBP15.51■□□□□ 0.07
BRPF3-201ENST00000339717 PRIMPOLQ96LW4 560 aa15.51■□□□□ 0.07
BRPF3-201ENST00000339717 MCM4P33991 863 aa15.5■□□□□ 0.07
BRPF3-201ENST00000339717 HSP90B2PQ58FF3 399 aa15.5■□□□□ 0.07
BRPF3-201ENST00000339717 OS9Q13438 667 aaPredicted RBP15.5■□□□□ 0.07
BRPF3-201ENST00000339717 MCCP23508 829 aa15.5■□□□□ 0.07
BRPF3-201ENST00000339717 HSP90AB3PQ58FF7 597 aa15.5■□□□□ 0.07
BRPF3-201ENST00000339717 ZNF777Q9ULD5 760 aaPredicted RBP15.49■□□□□ 0.07
BRPF3-201ENST00000339717 STK11IPQ8N1F8 1099 aa15.49■□□□□ 0.07
BRPF3-201ENST00000339717 BANK1Q8NDB2 785 aa15.49■□□□□ 0.07
BRPF3-201ENST00000339717 TRIM6-TRIM34B2RNG4 842 aa15.49■□□□□ 0.07
BRPF3-201ENST00000339717 TEX2Q8IWB9 1127 aa15.49■□□□□ 0.07
BRPF3-201ENST00000339717 TRIM34Q9BYJ4 488 aa15.49■□□□□ 0.07
BRPF3-201ENST00000339717 OFD1O75665 1012 aa15.49■□□□□ 0.07
BRPF3-201ENST00000339717 RRAGDQ9NQL2 400 aaPredicted RBP15.49■□□□□ 0.07
BRPF3-201ENST00000339717 SENP3-EIF4A1A0A087X0R7 540 aa15.48■□□□□ 0.07
BRPF3-201ENST00000339717 RNF20Q5VTR2 975 aa15.47■□□□□ 0.07
BRPF3-201ENST00000339717 RALBP1Q15311 655 aa15.47■□□□□ 0.07
BRPF3-201ENST00000339717 NUCB2P80303 420 aa15.47■□□□□ 0.07
BRPF3-201ENST00000339717 ZFP91Q96JP5 570 aaPredicted RBP15.46■□□□□ 0.07
BRPF3-201ENST00000339717 CCDC91Q7Z6B0 441 aa15.46■□□□□ 0.06
BRPF3-201ENST00000339717 IFT57Q9NWB7 429 aa15.46■□□□□ 0.06
BRPF3-201ENST00000339717 CCDC112Q8NEF3 446 aa15.45■□□□□ 0.06
BRPF3-201ENST00000339717 FAM107BQ9H098 131 aa15.45■□□□□ 0.06
BRPF3-201ENST00000339717 PES1O00541 588 aaKnown RBP15.44■□□□□ 0.06
BRPF3-201ENST00000339717 GNL2Q13823 731 aaKnown RBP15.44■□□□□ 0.06
BRPF3-201ENST00000339717 CLSTN1O94985 981 aa15.44■□□□□ 0.06
BRPF3-201ENST00000339717 MYCBPQ99417 103 aaPredicted RBP15.44■□□□□ 0.06
BRPF3-201ENST00000339717 TNNT1P13805 278 aa15.44■□□□□ 0.06
BRPF3-201ENST00000339717 DMTNQ08495 405 aa15.44■□□□□ 0.06
BRPF3-201ENST00000339717 RSF1Q96T23 1441 aaPredicted RBP15.44■□□□□ 0.06
BRPF3-201ENST00000339717 PSMD1Q99460 953 aa15.43■□□□□ 0.06
BRPF3-201ENST00000339717 CCDC191Q8NCU4 936 aa15.42■□□□□ 0.06
BRPF3-201ENST00000339717 FEZ1Q99689 392 aa15.42■□□□□ 0.06
BRPF3-201ENST00000339717 NPM1P06748 294 aaKnown RBP eCLIP15.42■□□□□ 0.06
BRPF3-201ENST00000339717 RSPH4AQ5TD94 716 aa15.42■□□□□ 0.06
BRPF3-201ENST00000339717 SLC26A8Q96RN1 970 aa15.41■□□□□ 0.06
BRPF3-201ENST00000339717 ST18O60284 1047 aa15.41■□□□□ 0.06
BRPF3-201ENST00000339717 RASSF4Q9H2L5 321 aa15.41■□□□□ 0.06
BRPF3-201ENST00000339717 XRCC6P12956 609 aaKnown RBP eCLIP15.41■□□□□ 0.06
BRPF3-201ENST00000339717 SARNPP82979 210 aaKnown RBP15.41■□□□□ 0.06
BRPF3-201ENST00000339717 MBD3O95983 291 aa15.4■□□□□ 0.06
BRPF3-201ENST00000339717 BAZ1BQ9UIG0 1483 aaKnown RBP15.4■□□□□ 0.06
BRPF3-201ENST00000339717 U2SURPO15042 1029 aaKnown RBP15.4■□□□□ 0.06
BRPF3-201ENST00000339717 CDR1P51861 262 aa15.4■□□□□ 0.06
BRPF3-201ENST00000339717 CT47A1Q5JQC4 288 aaPredicted RBP15.4■□□□□ 0.06
BRPF3-201ENST00000339717 TXLNBQ8N3L3 684 aa15.4■□□□□ 0.06
BRPF3-201ENST00000339717 TRERF1Q96PN7 1200 aa15.4■□□□□ 0.06
BRPF3-201ENST00000339717 GOLGA3Q08378 1498 aa15.4■□□□□ 0.06
BRPF3-201ENST00000339717 ERCC4Q92889 916 aaPredicted RBP15.4■□□□□ 0.06
BRPF3-201ENST00000339717 PPP1R15AO75807 674 aaPredicted RBP15.39■□□□□ 0.05
BRPF3-201ENST00000339717 HSPA5P11021 654 aaKnown RBP15.39■□□□□ 0.05
BRPF3-201ENST00000339717 XPCQ01831 940 aaPredicted RBP15.39■□□□□ 0.05
BRPF3-201ENST00000339717 GABPB1Q06547 395 aaPredicted RBP15.39■□□□□ 0.05
BRPF3-201ENST00000339717 HS1BP3Q53T59 392 aa15.39■□□□□ 0.05
BRPF3-201ENST00000339717 CNPY4Q8N129 248 aa15.39■□□□□ 0.05
BRPF3-201ENST00000339717 KRT222Q8N1A0 295 aa15.38■□□□□ 0.05
BRPF3-201ENST00000339717 CREBRFQ8IUR6 639 aa15.38■□□□□ 0.05
BRPF3-201ENST00000339717 FOXD4L1Q9NU39 408 aa15.38■□□□□ 0.05
BRPF3-201ENST00000339717 GOLIM4O00461 696 aa15.38■□□□□ 0.05
BRPF3-201ENST00000339717 CIZ1Q9ULV3 898 aaPredicted RBP15.38■□□□□ 0.05
BRPF3-201ENST00000339717 CRBNQ96SW2 442 aa15.37■□□□□ 0.05
BRPF3-201ENST00000339717 TPD52L1Q16890 204 aaPredicted RBP15.37■□□□□ 0.05
BRPF3-201ENST00000339717 DDX11Q96FC9 970 aa15.37■□□□□ 0.05
BRPF3-201ENST00000339717 BAZ1AQ9NRL2 1556 aaPredicted RBP15.37■□□□□ 0.05
BRPF3-201ENST00000339717 LIG1P18858 919 aa15.37■□□□□ 0.05
BRPF3-201ENST00000339717 FBXO3Q9UK99 471 aa15.37■□□□□ 0.05
BRPF3-201ENST00000339717 PHLDB1Q86UU1 1377 aa15.37■□□□□ 0.05
BRPF3-201ENST00000339717 NOL10Q9BSC4 688 aaKnown RBP15.36■□□□□ 0.05
BRPF3-201ENST00000339717 ATP6V1DQ9Y5K8 247 aa15.36■□□□□ 0.05
BRPF3-201ENST00000339717 DHX57Q6P158 1386 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms