RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 HDAC5Q9UQL6 1122 aa15.59■□□□□ 0.09
BRPF3-201ENST00000339717 TPM4P67936 248 aa15.59■□□□□ 0.09
BRPF3-201ENST00000339717 RRP1P56182 461 aaKnown RBP15.58■□□□□ 0.08
BRPF3-201ENST00000339717 GIMAP7Q8NHV1 300 aa15.58■□□□□ 0.08
BRPF3-201ENST00000339717 VGLL3A8MV65 326 aa15.57■□□□□ 0.08
BRPF3-201ENST00000339717 PMFBP1Q8TBY8 1022 aa15.57■□□□□ 0.08
BRPF3-201ENST00000339717 MCM5P33992 734 aa15.57■□□□□ 0.08
BRPF3-201ENST00000339717 TERF1P54274 439 aa15.57■□□□□ 0.08
BRPF3-201ENST00000339717 MNS1Q8NEH6 495 aa15.57■□□□□ 0.08
BRPF3-201ENST00000339717 KTN1Q86UP2 1357 aaKnown RBP15.57■□□□□ 0.08
BRPF3-201ENST00000339717 TDO2P48775 406 aa15.56■□□□□ 0.08
BRPF3-201ENST00000339717 CLIP1P30622 1438 aa15.56■□□□□ 0.08
BRPF3-201ENST00000339717 ARID3CA6NKF2 412 aa15.56■□□□□ 0.08
BRPF3-201ENST00000339717 ERICH4A6NGS2 130 aa15.55■□□□□ 0.08
BRPF3-201ENST00000339717 TPRNQ4KMQ1 711 aa15.55■□□□□ 0.08
BRPF3-201ENST00000339717 UTP14CQ5TAP6 766 aaKnown RBP15.55■□□□□ 0.08
BRPF3-201ENST00000339717 SIN3AQ96ST3 1273 aa15.55■□□□□ 0.08
BRPF3-201ENST00000339717 PAIP2Q9BPZ3 127 aaKnown RBP15.55■□□□□ 0.08
BRPF3-201ENST00000339717 ACBD3Q9H3P7 528 aa15.55■□□□□ 0.08
BRPF3-201ENST00000339717 RWDD1Q9H446 243 aaPredicted RBP15.55■□□□□ 0.08
BRPF3-201ENST00000339717 EXOC6Q8TAG9 804 aa15.54■□□□□ 0.08
BRPF3-201ENST00000339717 POGKQ9P215 609 aa15.54■□□□□ 0.08
BRPF3-201ENST00000339717 MFAP1P55081 439 aaKnown RBP15.54■□□□□ 0.08
BRPF3-201ENST00000339717 TNIKQ9UKE5 1360 aa15.53■□□□□ 0.08
BRPF3-201ENST00000339717 H0YHG0 523 aa15.53■□□□□ 0.08
BRPF3-201ENST00000339717 CAVIN1Q6NZI2 390 aaKnown RBP15.52■□□□□ 0.08
BRPF3-201ENST00000339717 NOC3LQ8WTT2 800 aaKnown RBP15.52■□□□□ 0.08
BRPF3-201ENST00000339717 NEFHP12036 1026 aa15.52■□□□□ 0.07
BRPF3-201ENST00000339717 ZNF592Q92610 1267 aa15.51■□□□□ 0.07
BRPF3-201ENST00000339717 ZNF526Q8TF50 670 aaPredicted RBP15.51■□□□□ 0.07
BRPF3-201ENST00000339717 PRIMPOLQ96LW4 560 aa15.51■□□□□ 0.07
BRPF3-201ENST00000339717 MCM4P33991 863 aa15.5■□□□□ 0.07
BRPF3-201ENST00000339717 HSP90B2PQ58FF3 399 aa15.5■□□□□ 0.07
BRPF3-201ENST00000339717 OS9Q13438 667 aaPredicted RBP15.5■□□□□ 0.07
BRPF3-201ENST00000339717 MCCP23508 829 aa15.5■□□□□ 0.07
BRPF3-201ENST00000339717 HSP90AB3PQ58FF7 597 aa15.5■□□□□ 0.07
BRPF3-201ENST00000339717 ZNF777Q9ULD5 760 aaPredicted RBP15.49■□□□□ 0.07
BRPF3-201ENST00000339717 STK11IPQ8N1F8 1099 aa15.49■□□□□ 0.07
BRPF3-201ENST00000339717 BANK1Q8NDB2 785 aa15.49■□□□□ 0.07
BRPF3-201ENST00000339717 TRIM6-TRIM34B2RNG4 842 aa15.49■□□□□ 0.07
BRPF3-201ENST00000339717 TEX2Q8IWB9 1127 aa15.49■□□□□ 0.07
BRPF3-201ENST00000339717 TRIM34Q9BYJ4 488 aa15.49■□□□□ 0.07
BRPF3-201ENST00000339717 OFD1O75665 1012 aa15.49■□□□□ 0.07
BRPF3-201ENST00000339717 RRAGDQ9NQL2 400 aaPredicted RBP15.49■□□□□ 0.07
BRPF3-201ENST00000339717 SENP3-EIF4A1A0A087X0R7 540 aa15.48■□□□□ 0.07
BRPF3-201ENST00000339717 RNF20Q5VTR2 975 aa15.47■□□□□ 0.07
BRPF3-201ENST00000339717 RALBP1Q15311 655 aa15.47■□□□□ 0.07
BRPF3-201ENST00000339717 NUCB2P80303 420 aa15.47■□□□□ 0.07
BRPF3-201ENST00000339717 ZFP91Q96JP5 570 aaPredicted RBP15.46■□□□□ 0.07
BRPF3-201ENST00000339717 CCDC91Q7Z6B0 441 aa15.46■□□□□ 0.06
BRPF3-201ENST00000339717 IFT57Q9NWB7 429 aa15.46■□□□□ 0.06
BRPF3-201ENST00000339717 CCDC112Q8NEF3 446 aa15.45■□□□□ 0.06
BRPF3-201ENST00000339717 FAM107BQ9H098 131 aa15.45■□□□□ 0.06
BRPF3-201ENST00000339717 PES1O00541 588 aaKnown RBP15.44■□□□□ 0.06
BRPF3-201ENST00000339717 GNL2Q13823 731 aaKnown RBP15.44■□□□□ 0.06
BRPF3-201ENST00000339717 CLSTN1O94985 981 aa15.44■□□□□ 0.06
BRPF3-201ENST00000339717 MYCBPQ99417 103 aaPredicted RBP15.44■□□□□ 0.06
BRPF3-201ENST00000339717 TNNT1P13805 278 aa15.44■□□□□ 0.06
BRPF3-201ENST00000339717 DMTNQ08495 405 aa15.44■□□□□ 0.06
BRPF3-201ENST00000339717 RSF1Q96T23 1441 aaPredicted RBP15.44■□□□□ 0.06
BRPF3-201ENST00000339717 PSMD1Q99460 953 aa15.43■□□□□ 0.06
BRPF3-201ENST00000339717 CCDC191Q8NCU4 936 aa15.42■□□□□ 0.06
BRPF3-201ENST00000339717 FEZ1Q99689 392 aa15.42■□□□□ 0.06
BRPF3-201ENST00000339717 NPM1P06748 294 aaKnown RBP eCLIP15.42■□□□□ 0.06
BRPF3-201ENST00000339717 RSPH4AQ5TD94 716 aa15.42■□□□□ 0.06
BRPF3-201ENST00000339717 SLC26A8Q96RN1 970 aa15.41■□□□□ 0.06
BRPF3-201ENST00000339717 ST18O60284 1047 aa15.41■□□□□ 0.06
BRPF3-201ENST00000339717 RASSF4Q9H2L5 321 aa15.41■□□□□ 0.06
BRPF3-201ENST00000339717 XRCC6P12956 609 aaKnown RBP eCLIP15.41■□□□□ 0.06
BRPF3-201ENST00000339717 SARNPP82979 210 aaKnown RBP15.41■□□□□ 0.06
BRPF3-201ENST00000339717 MBD3O95983 291 aa15.4■□□□□ 0.06
BRPF3-201ENST00000339717 BAZ1BQ9UIG0 1483 aaKnown RBP15.4■□□□□ 0.06
BRPF3-201ENST00000339717 U2SURPO15042 1029 aaKnown RBP15.4■□□□□ 0.06
BRPF3-201ENST00000339717 CDR1P51861 262 aa15.4■□□□□ 0.06
BRPF3-201ENST00000339717 CT47A1Q5JQC4 288 aaPredicted RBP15.4■□□□□ 0.06
BRPF3-201ENST00000339717 TXLNBQ8N3L3 684 aa15.4■□□□□ 0.06
BRPF3-201ENST00000339717 TRERF1Q96PN7 1200 aa15.4■□□□□ 0.06
BRPF3-201ENST00000339717 GOLGA3Q08378 1498 aa15.4■□□□□ 0.06
BRPF3-201ENST00000339717 ERCC4Q92889 916 aaPredicted RBP15.4■□□□□ 0.06
BRPF3-201ENST00000339717 PPP1R15AO75807 674 aaPredicted RBP15.39■□□□□ 0.05
BRPF3-201ENST00000339717 HSPA5P11021 654 aaKnown RBP15.39■□□□□ 0.05
BRPF3-201ENST00000339717 XPCQ01831 940 aaPredicted RBP15.39■□□□□ 0.05
BRPF3-201ENST00000339717 GABPB1Q06547 395 aaPredicted RBP15.39■□□□□ 0.05
BRPF3-201ENST00000339717 HS1BP3Q53T59 392 aa15.39■□□□□ 0.05
BRPF3-201ENST00000339717 CNPY4Q8N129 248 aa15.39■□□□□ 0.05
BRPF3-201ENST00000339717 KRT222Q8N1A0 295 aa15.38■□□□□ 0.05
BRPF3-201ENST00000339717 CREBRFQ8IUR6 639 aa15.38■□□□□ 0.05
BRPF3-201ENST00000339717 FOXD4L1Q9NU39 408 aa15.38■□□□□ 0.05
BRPF3-201ENST00000339717 GOLIM4O00461 696 aa15.38■□□□□ 0.05
BRPF3-201ENST00000339717 CIZ1Q9ULV3 898 aaPredicted RBP15.38■□□□□ 0.05
BRPF3-201ENST00000339717 CRBNQ96SW2 442 aa15.37■□□□□ 0.05
BRPF3-201ENST00000339717 TPD52L1Q16890 204 aaPredicted RBP15.37■□□□□ 0.05
BRPF3-201ENST00000339717 DDX11Q96FC9 970 aa15.37■□□□□ 0.05
BRPF3-201ENST00000339717 BAZ1AQ9NRL2 1556 aaPredicted RBP15.37■□□□□ 0.05
BRPF3-201ENST00000339717 LIG1P18858 919 aa15.37■□□□□ 0.05
BRPF3-201ENST00000339717 FBXO3Q9UK99 471 aa15.37■□□□□ 0.05
BRPF3-201ENST00000339717 PHLDB1Q86UU1 1377 aa15.37■□□□□ 0.05
BRPF3-201ENST00000339717 NOL10Q9BSC4 688 aaKnown RBP15.36■□□□□ 0.05
BRPF3-201ENST00000339717 ATP6V1DQ9Y5K8 247 aa15.36■□□□□ 0.05
BRPF3-201ENST00000339717 DHX57Q6P158 1386 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms