RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CENPBP07199 599 aaPredicted RBP10.41□□□□□ -0.74
SRFBP1-201ENST00000339397 ZFYVE16Q7Z3T8 1539 aa10.41□□□□□ -0.74
SRFBP1-201ENST00000339397 ARAP3Q8WWN8 1544 aa10.41□□□□□ -0.74
SRFBP1-201ENST00000339397 RTN4Q9NQC3 1192 aaKnown RBP10.4□□□□□ -0.74
SRFBP1-201ENST00000339397 ERBINQ96RT1 1412 aa10.4□□□□□ -0.74
SRFBP1-201ENST00000339397 RTEL1-TNFRSF6BF6WH68 1400 aa10.4□□□□□ -0.75
SRFBP1-201ENST00000339397 SPATA31E1Q6ZUB1 1445 aa10.4□□□□□ -0.75
SRFBP1-201ENST00000339397 CCDC144AA2RUR9 1427 aa10.39□□□□□ -0.75
SRFBP1-201ENST00000339397 NBPF1Q3BBV0 1214 aa10.39□□□□□ -0.75
SRFBP1-201ENST00000339397 UNC13BO14795 1591 aa10.39□□□□□ -0.75
SRFBP1-201ENST00000339397 POLR3GLQ9BT43 218 aa10.38□□□□□ -0.75
SRFBP1-201ENST00000339397 ATP7AQ04656 1500 aa10.38□□□□□ -0.75
SRFBP1-201ENST00000339397 GTF3C3Q9Y5Q9 886 aa10.37□□□□□ -0.75
SRFBP1-201ENST00000339397 KIF7Q2M1P5 1343 aa10.37□□□□□ -0.75
SRFBP1-201ENST00000339397 CNGB1Q14028 1251 aaPredicted RBP10.37□□□□□ -0.75
SRFBP1-201ENST00000339397 CARD11Q9BXL7 1154 aa10.37□□□□□ -0.75
SRFBP1-201ENST00000339397 DHX29Q7Z478 1369 aaKnown RBP10.37□□□□□ -0.75
SRFBP1-201ENST00000339397 ANP32CO43423 234 aa10.36□□□□□ -0.75
SRFBP1-201ENST00000339397 FAM69CQ0P6D2 419 aa10.36□□□□□ -0.75
SRFBP1-201ENST00000339397 RIMBP3CA6NJZ7 1639 aa10.36□□□□□ -0.75
SRFBP1-201ENST00000339397 RIMBP3BA6NNM3 1639 aa10.36□□□□□ -0.75
SRFBP1-201ENST00000339397 IQGAP3Q86VI3 1631 aa10.36□□□□□ -0.75
SRFBP1-201ENST00000339397 RIMBP3Q9UFD9 1639 aa10.36□□□□□ -0.75
SRFBP1-201ENST00000339397 GGT6Q6P531 493 aa10.36□□□□□ -0.75
SRFBP1-201ENST00000339397 USP47Q96K76 1375 aa10.36□□□□□ -0.75
SRFBP1-201ENST00000339397 MAGI2Q86UL8 1455 aa10.36□□□□□ -0.75
SRFBP1-201ENST00000339397 CCDC7Q96M83 1385 aa10.35□□□□□ -0.75
SRFBP1-201ENST00000339397 ST20-MTHFSA0A0A6YYL1 179 aa10.35□□□□□ -0.75
SRFBP1-201ENST00000339397 INO80Q9ULG1 1556 aaPredicted RBP10.35□□□□□ -0.75
SRFBP1-201ENST00000339397 KIDINS220Q9ULH0 1771 aa10.35□□□□□ -0.75
SRFBP1-201ENST00000339397 ZNF518AQ6AHZ1 1483 aa10.34□□□□□ -0.75
SRFBP1-201ENST00000339397 UHRF1BP1Q6BDS2 1440 aa10.34□□□□□ -0.75
SRFBP1-201ENST00000339397 CCDC184Q52MB2 194 aa10.33□□□□□ -0.76
SRFBP1-201ENST00000339397 A2MP01023 1474 aa10.33□□□□□ -0.76
SRFBP1-201ENST00000339397 POGZQ7Z3K3 1410 aa10.33□□□□□ -0.76
SRFBP1-201ENST00000339397 KCNA4P22459 653 aa10.32□□□□□ -0.76
SRFBP1-201ENST00000339397 ROCK2O75116 1388 aaKnown RBP10.32□□□□□ -0.76
SRFBP1-201ENST00000339397 E9PCH4 1651 aa10.32□□□□□ -0.76
SRFBP1-201ENST00000339397 ATP10AO60312 1499 aa10.32□□□□□ -0.76
SRFBP1-201ENST00000339397 PRAG1Q86YV5 1406 aa10.31□□□□□ -0.76
SRFBP1-201ENST00000339397 BCORL1Q5H9F3 1711 aa10.31□□□□□ -0.76
SRFBP1-201ENST00000339397 RALGAPBQ86X10 1494 aa10.3□□□□□ -0.76
SRFBP1-201ENST00000339397 UGGT1Q9NYU2 1555 aa10.3□□□□□ -0.76
SRFBP1-201ENST00000339397 MROH1Q8NDA8 1641 aa10.3□□□□□ -0.76
SRFBP1-201ENST00000339397 KANK1Q14678 1352 aa10.29□□□□□ -0.76
SRFBP1-201ENST00000339397 CFAP65Q6ZU64 1925 aaKnown RBP10.29□□□□□ -0.76
SRFBP1-201ENST00000339397 KDM5CP41229 1560 aa10.29□□□□□ -0.76
SRFBP1-201ENST00000339397 YEATS2Q9ULM3 1422 aa10.29□□□□□ -0.76
SRFBP1-201ENST00000339397 FRMPD1Q5SYB0 1578 aa10.29□□□□□ -0.76
SRFBP1-201ENST00000339397 DEPDC5O75140 1603 aa10.28□□□□□ -0.76
SRFBP1-201ENST00000339397 CNTLNQ9NXG0 1405 aa10.28□□□□□ -0.76
SRFBP1-201ENST00000339397 MLH3Q9UHC1 1453 aa10.28□□□□□ -0.76
SRFBP1-201ENST00000339397 PTPRTO14522 1441 aa10.28□□□□□ -0.76
SRFBP1-201ENST00000339397 WASHC2CQ9Y4E1 1318 aa10.28□□□□□ -0.76
SRFBP1-201ENST00000339397 CCER2I3L3R5 266 aa10.28□□□□□ -0.76
SRFBP1-201ENST00000339397 VWDEQ8N2E2 1590 aa10.27□□□□□ -0.77
SRFBP1-201ENST00000339397 SENP3Q9H4L4 574 aaPredicted RBP10.27□□□□□ -0.77
SRFBP1-201ENST00000339397 PRKRIP1Q9H875 184 aaPredicted RBP10.27□□□□□ -0.77
SRFBP1-201ENST00000339397 CHGAP10645 457 aaKnown RBP10.27□□□□□ -0.77
SRFBP1-201ENST00000339397 NEO1Q92859 1461 aa10.27□□□□□ -0.77
SRFBP1-201ENST00000339397 PRDM15P57071 1507 aaPredicted RBP10.26□□□□□ -0.77
SRFBP1-201ENST00000339397 TSPOAP1O95153 1857 aa10.26□□□□□ -0.77
SRFBP1-201ENST00000339397 CLTCL1P53675 1640 aa10.26□□□□□ -0.77
SRFBP1-201ENST00000339397 ABCA6Q8N139 1617 aa10.26□□□□□ -0.77
SRFBP1-201ENST00000339397 MAP3K4Q9Y6R4 1608 aa10.25□□□□□ -0.77
SRFBP1-201ENST00000339397 HECW2Q9P2P5 1572 aa10.25□□□□□ -0.77
SRFBP1-201ENST00000339397 NUTM2DQ5VT03 806 aaPredicted RBP10.24□□□□□ -0.77
SRFBP1-201ENST00000339397 TET3O43151 1660 aa10.24□□□□□ -0.77
SRFBP1-201ENST00000339397 ADGRF5Q8IZF2 1346 aa10.24□□□□□ -0.77
SRFBP1-201ENST00000339397 NPATQ14207 1427 aa10.24□□□□□ -0.77
SRFBP1-201ENST00000339397 TRPM2O94759 1503 aa10.24□□□□□ -0.77
SRFBP1-201ENST00000339397 TRPM1Q7Z4N2 1603 aa10.24□□□□□ -0.77
SRFBP1-201ENST00000339397 TESK2Q96S53 571 aa10.24□□□□□ -0.77
SRFBP1-201ENST00000339397 PPRC1Q5VV67 1664 aaKnown RBP10.24□□□□□ -0.77
SRFBP1-201ENST00000339397 CFAP70Q5T0N1 1121 aa10.23□□□□□ -0.77
SRFBP1-201ENST00000339397 SPHKAPQ2M3C7 1700 aa10.23□□□□□ -0.77
SRFBP1-201ENST00000339397 CFAP74Q9C0B2 1584 aa10.23□□□□□ -0.77
SRFBP1-201ENST00000339397 CEP152O94986 1710 aa10.23□□□□□ -0.77
SRFBP1-201ENST00000339397 DIP2BQ9P265 1576 aa10.22□□□□□ -0.77
SRFBP1-201ENST00000339397 EIF2AK4Q9P2K8 1649 aaKnown RBP10.22□□□□□ -0.77
SRFBP1-201ENST00000339397 GPRASP1Q5JY77 1395 aa10.22□□□□□ -0.77
SRFBP1-201ENST00000339397 SENP3-EIF4A1A0A087X0R7 540 aa10.22□□□□□ -0.77
SRFBP1-201ENST00000339397 COL17A1Q9UMD9 1497 aaPredicted RBP10.22□□□□□ -0.77
SRFBP1-201ENST00000339397 EFCAB6Q5THR3 1501 aa10.21□□□□□ -0.77
SRFBP1-201ENST00000339397 DISP3Q9P2K9 1392 aa10.21□□□□□ -0.77
SRFBP1-201ENST00000339397 RICTORQ6R327 1708 aa10.21□□□□□ -0.77
SRFBP1-201ENST00000339397 FAM9BQ8IZU0 186 aa10.21□□□□□ -0.77
SRFBP1-201ENST00000339397 DIP2CQ9Y2E4 1556 aa10.21□□□□□ -0.77
SRFBP1-201ENST00000339397 MLECQ14165 292 aa10.2□□□□□ -0.78
SRFBP1-201ENST00000339397 FBXO31Q5XUX0 539 aaPredicted RBP10.2□□□□□ -0.78
SRFBP1-201ENST00000339397 GLI2P10070 1586 aa10.2□□□□□ -0.78
SRFBP1-201ENST00000339397 MRS2Q9HD23 443 aa10.2□□□□□ -0.78
SRFBP1-201ENST00000339397 RNF17Q9BXT8 1623 aaKnown RBP10.19□□□□□ -0.78
SRFBP1-201ENST00000339397 IDI1Q13907 227 aa10.19□□□□□ -0.78
SRFBP1-201ENST00000339397 ABCC3O15438 1527 aa10.19□□□□□ -0.78
SRFBP1-201ENST00000339397 HNRNPUQ00839 825 aaKnown RBP eCLIP10.18□□□□□ -0.78
SRFBP1-201ENST00000339397 POLR1AO95602 1720 aaPredicted RBP10.18□□□□□ -0.78
SRFBP1-201ENST00000339397 TMEM132EQ6IEE7 984 aa10.18□□□□□ -0.78
SRFBP1-201ENST00000339397 LMTK2Q8IWU2 1503 aa10.17□□□□□ -0.78
SRFBP1-201ENST00000339397 ARID4BQ4LE39 1312 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms