RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.28■□□□□ 0.04
FN1-202ENST00000336916 MIA2Q96PC5 1412 aa15.28■□□□□ 0.04
FN1-202ENST00000336916 NOC3LQ8WTT2 800 aaKnown RBP15.28■□□□□ 0.04
FN1-202ENST00000336916 RAB3GAP2Q9H2M9 1393 aa15.27■□□□□ 0.04
FN1-202ENST00000336916 GTF2E1P29083 439 aaPredicted RBP15.27■□□□□ 0.04
FN1-202ENST00000336916 JPH4Q96JJ6 628 aa15.27■□□□□ 0.03
FN1-202ENST00000336916 SAFB2Q14151 953 aaKnown RBP eCLIP15.27■□□□□ 0.03
FN1-202ENST00000336916 C1orf141Q5JVX7 400 aa15.27■□□□□ 0.03
FN1-202ENST00000336916 TDRD9Q8NDG6 1382 aaKnown RBP15.26■□□□□ 0.03
FN1-202ENST00000336916 SCAPERQ9BY12 1400 aa15.26■□□□□ 0.03
FN1-202ENST00000336916 NLRP13Q86W25 1043 aa15.26■□□□□ 0.03
FN1-202ENST00000336916 CHMP3Q9Y3E7 222 aa15.25■□□□□ 0.03
FN1-202ENST00000336916 ITPRIPQ8IWB1 547 aa15.25■□□□□ 0.03
FN1-202ENST00000336916 RCAN3Q9UKA8 241 aa15.25■□□□□ 0.03
FN1-202ENST00000336916 HECW1Q76N89 1606 aa15.25■□□□□ 0.03
FN1-202ENST00000336916 TCERG1O14776 1098 aaKnown RBP15.25■□□□□ 0.03
FN1-202ENST00000336916 NOL10Q9BSC4 688 aaKnown RBP15.25■□□□□ 0.03
FN1-202ENST00000336916 PTPRGP23470 1445 aa15.24■□□□□ 0.03
FN1-202ENST00000336916 EVA1CP58658 441 aa15.24■□□□□ 0.03
FN1-202ENST00000336916 OSCARQ8IYS5 282 aa15.24■□□□□ 0.03
FN1-202ENST00000336916 CUL7Q14999 1698 aa15.24■□□□□ 0.03
FN1-202ENST00000336916 ST18O60284 1047 aa15.23■□□□□ 0.03
FN1-202ENST00000336916 SIN3AQ96ST3 1273 aa15.23■□□□□ 0.03
FN1-202ENST00000336916 CFAP65Q6ZU64 1925 aaKnown RBP15.23■□□□□ 0.03
FN1-202ENST00000336916 ATP6V1DQ9Y5K8 247 aa15.23■□□□□ 0.03
FN1-202ENST00000336916 CEP89Q96ST8 783 aa15.23■□□□□ 0.03
FN1-202ENST00000336916 SMC4Q9NTJ3 1288 aa15.23■□□□□ 0.03
FN1-202ENST00000336916 MYOM3Q5VTT5 1437 aa15.22■□□□□ 0.03
FN1-202ENST00000336916 HSP90B1P14625 803 aaKnown RBP15.22■□□□□ 0.03
FN1-202ENST00000336916 NEXNQ0ZGT2 675 aa15.22■□□□□ 0.03
FN1-202ENST00000336916 FRAT2O75474 233 aaPredicted RBP15.22■□□□□ 0.03
FN1-202ENST00000336916 KIF16BQ96L93 1317 aa15.22■□□□□ 0.03
FN1-202ENST00000336916 RRBP1Q9P2E9 1410 aaKnown RBP15.21■□□□□ 0.03
FN1-202ENST00000336916 EFCAB5A4FU69 1503 aa15.21■□□□□ 0.03
FN1-202ENST00000336916 COG3Q96JB2 828 aa15.2■□□□□ 0.02
FN1-202ENST00000336916 ZNF330Q9Y3S2 320 aaPredicted RBP15.2■□□□□ 0.02
FN1-202ENST00000336916 TRIM6-TRIM34B2RNG4 842 aa15.2■□□□□ 0.02
FN1-202ENST00000336916 TAOK2Q9UL54 1235 aa15.19■□□□□ 0.02
FN1-202ENST00000336916 ERICH3Q5RHP9 1530 aa15.19■□□□□ 0.02
FN1-202ENST00000336916 PLEKHH2Q8IVE3 1493 aa15.19■□□□□ 0.02
FN1-202ENST00000336916 HSPA5P11021 654 aaKnown RBP15.19■□□□□ 0.02
FN1-202ENST00000336916 TPM2P07951 284 aa15.18■□□□□ 0.02
FN1-202ENST00000336916 TSR1Q2NL82 804 aaKnown RBP15.18■□□□□ 0.02
FN1-202ENST00000336916 TRIM34Q9BYJ4 488 aa15.18■□□□□ 0.02
FN1-202ENST00000336916 UNC13AQ9UPW8 1703 aa15.18■□□□□ 0.02
FN1-202ENST00000336916 CENPJQ9HC77 1338 aaPredicted RBP15.18■□□□□ 0.02
FN1-202ENST00000336916 GOLGA6L1Q8N7Z2 621 aa15.18■□□□□ 0.02
FN1-202ENST00000336916 FOXD1Q16676 465 aa15.18■□□□□ 0.02
FN1-202ENST00000336916 TPRNQ4KMQ1 711 aa15.18■□□□□ 0.02
FN1-202ENST00000336916 RASSF8Q8NHQ8 419 aa15.18■□□□□ 0.02
FN1-202ENST00000336916 CPLX2Q6PUV4 134 aaKnown RBP15.18■□□□□ 0.02
FN1-202ENST00000336916 NAP1L5Q96NT1 182 aaPredicted RBP15.18■□□□□ 0.02
FN1-202ENST00000336916 ARHGAP5Q13017 1502 aa15.18■□□□□ 0.02
FN1-202ENST00000336916 FHOD3Q2V2M9 1422 aa15.17■□□□□ 0.02
FN1-202ENST00000336916 DCAF8L1A6NGE4 600 aa15.17■□□□□ 0.02
FN1-202ENST00000336916 TCEAL9Q9UHQ7 104 aa15.17■□□□□ 0.02
FN1-202ENST00000336916 AKAP17AQ02040 695 aaKnown RBP15.17■□□□□ 0.02
FN1-202ENST00000336916 DDX58O95786 925 aaKnown RBP15.17■□□□□ 0.02
FN1-202ENST00000336916 TTC5Q8N0Z6 440 aa15.15■□□□□ 0.02
FN1-202ENST00000336916 RUFY2Q8WXA3 655 aa15.15■□□□□ 0.02
FN1-202ENST00000336916 SYNJ2O15056 1496 aa15.15■□□□□ 0.02
FN1-202ENST00000336916 HOOK1Q9UJC3 728 aaKnown RBP15.15■□□□□ 0.02
FN1-202ENST00000336916 HNRNPMP52272 730 aaKnown RBP eCLIP15.15■□□□□ 0.02
FN1-202ENST00000336916 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
FN1-202ENST00000336916 AAMPQ13685 434 aa15.14■□□□□ 0.01
FN1-202ENST00000336916 TEFQ10587 303 aa15.14■□□□□ 0.01
FN1-202ENST00000336916 SYNE3Q6ZMZ3 975 aa15.14■□□□□ 0.01
FN1-202ENST00000336916 FYCO1Q9BQS8 1478 aa15.14■□□□□ 0.01
FN1-202ENST00000336916 TPM1P09493 284 aa15.14■□□□□ 0.01
FN1-202ENST00000336916 MYBBP1AQ9BQG0 1328 aaKnown RBP15.13■□□□□ 0.01
FN1-202ENST00000336916 MARCH6O60337 910 aa15.13■□□□□ 0.01
FN1-202ENST00000336916 TPM3P06753 285 aa15.12■□□□□ 0.01
FN1-202ENST00000336916 MEX3CQ5U5Q3 659 aaKnown RBP15.12■□□□□ 0.01
FN1-202ENST00000336916 GRIN2BQ13224 1484 aa15.12■□□□□ 0.01
FN1-202ENST00000336916 PSME1Q06323 249 aa15.1■□□□□ 0.01
FN1-202ENST00000336916 ATF3P18847 181 aa15.1■□□□□ 0.01
FN1-202ENST00000336916 CTDP1Q9Y5B0 961 aaPredicted RBP15.1■□□□□ 0.01
FN1-202ENST00000336916 CCDC70Q6NSX1 233 aa15.1■□□□□ 0.01
FN1-202ENST00000336916 E9PSI1 815 aa15.1■□□□□ 0.01
FN1-202ENST00000336916 DHX57Q6P158 1386 aaKnown RBP15.1■□□□□ 0.01
FN1-202ENST00000336916 SMG6Q86US8 1419 aaKnown RBP15.09■□□□□ 0.01
FN1-202ENST00000336916 HMGXB3Q12766 1538 aa15.09■□□□□ 0.01
FN1-202ENST00000336916 EHBP1L1Q8N3D4 1523 aa15.09■□□□□ 0.01
FN1-202ENST00000336916 SF3A1Q15459 793 aaKnown RBP15.09■□□□□ 0.01
FN1-202ENST00000336916 CCDC47Q96A33 483 aaKnown RBP15.09■□□□□ 0.01
FN1-202ENST00000336916 B4GALNT3Q6L9W6 998 aa15.08■□□□□ 0
FN1-202ENST00000336916 VPS37DQ86XT2 251 aa15.08■□□□□ 0
FN1-202ENST00000336916 REC8O95072 547 aa15.08■□□□□ 0
FN1-202ENST00000336916 SLC4A10Q6U841 1118 aa15.08■□□□□ 0
FN1-202ENST00000336916 A0A0U1RQG5 324 aaPredicted RBP15.07■□□□□ 0
FN1-202ENST00000336916 DDX11L8A8MPP1 907 aa15.07■□□□□ 0
FN1-202ENST00000336916 H3BQV1 296 aa15.07■□□□□ 0
FN1-202ENST00000336916 IFFO2Q5TF58 517 aa15.07■□□□□ 0
FN1-202ENST00000336916 CC2D2AQ9P2K1 1620 aa15.07■□□□□ 0
FN1-202ENST00000336916 ANKRD20A12PQ8NF67 263 aa15.07■□□□□ 0
FN1-202ENST00000336916 RNF20Q5VTR2 975 aa15.07■□□□□ 0
FN1-202ENST00000336916 ITSN2Q9NZM3 1697 aa15.06■□□□□ 0
FN1-202ENST00000336916 C9orf78Q9NZ63 289 aaPredicted RBP15.06■□□□□ 0
FN1-202ENST00000336916 TPD52L1Q16890 204 aaPredicted RBP15.06■□□□□ 0
FN1-202ENST00000336916 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms