RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 PLEKHG5O94827 1062 aa12.34□□□□□ -0.43
FNDC3B-201ENST00000336824 TERF2IPQ9NYB0 399 aa12.34□□□□□ -0.43
FNDC3B-201ENST00000336824 SALL2Q9Y467 1007 aaPredicted RBP12.33□□□□□ -0.43
FNDC3B-201ENST00000336824 KTN1Q86UP2 1357 aaKnown RBP12.33□□□□□ -0.44
FNDC3B-201ENST00000336824 PLCH2O75038 1416 aa12.32□□□□□ -0.44
FNDC3B-201ENST00000336824 AKNAQ7Z591 1439 aa12.32□□□□□ -0.44
FNDC3B-201ENST00000336824 MYO5CQ9NQX4 1742 aa12.32□□□□□ -0.44
FNDC3B-201ENST00000336824 MAPK8IP3Q9UPT6 1336 aa12.32□□□□□ -0.44
FNDC3B-201ENST00000336824 CFAP74Q9C0B2 1584 aa12.32□□□□□ -0.44
FNDC3B-201ENST00000336824 CC2D1BQ5T0F9 858 aaKnown RBP12.32□□□□□ -0.44
FNDC3B-201ENST00000336824 NUTM2DQ5VT03 806 aaPredicted RBP12.32□□□□□ -0.44
FNDC3B-201ENST00000336824 ABCC5O15440 1437 aa12.32□□□□□ -0.44
FNDC3B-201ENST00000336824 MORC1Q86VD1 984 aa12.31□□□□□ -0.44
FNDC3B-201ENST00000336824 SLC52A1Q9NWF4 448 aa12.31□□□□□ -0.44
FNDC3B-201ENST00000336824 NAIPQ13075 1403 aa12.3□□□□□ -0.44
FNDC3B-201ENST00000336824 EVC2Q86UK5 1308 aa12.29□□□□□ -0.44
FNDC3B-201ENST00000336824 NPM2Q86SE8 214 aaKnown RBP12.29□□□□□ -0.44
FNDC3B-201ENST00000336824 ZNF518AQ6AHZ1 1483 aa12.29□□□□□ -0.44
FNDC3B-201ENST00000336824 TRAK1Q9UPV9 953 aa12.29□□□□□ -0.44
FNDC3B-201ENST00000336824 USP47Q96K76 1375 aa12.28□□□□□ -0.44
FNDC3B-201ENST00000336824 RALBP1Q15311 655 aa12.28□□□□□ -0.44
FNDC3B-201ENST00000336824 DUOX2Q9NRD8 1548 aa12.27□□□□□ -0.44
FNDC3B-201ENST00000336824 TNNT2P45379 298 aaPredicted RBP12.27□□□□□ -0.44
FNDC3B-201ENST00000336824 PPP6R1Q9UPN7 881 aa12.27□□□□□ -0.45
FNDC3B-201ENST00000336824 SYCP2Q9BX26 1530 aa12.27□□□□□ -0.45
FNDC3B-201ENST00000336824 NCOA1Q15788 1441 aa12.26□□□□□ -0.45
FNDC3B-201ENST00000336824 PAK3O75914 559 aaPredicted RBP12.26□□□□□ -0.45
FNDC3B-201ENST00000336824 THEMISQ8N1K5 641 aaPredicted RBP12.26□□□□□ -0.45
FNDC3B-201ENST00000336824 GTF3C3Q9Y5Q9 886 aa12.25□□□□□ -0.45
FNDC3B-201ENST00000336824 A0A0G2JS52 829 aa12.25□□□□□ -0.45
FNDC3B-201ENST00000336824 NGDNQ8NEJ9 315 aaKnown RBP12.25□□□□□ -0.45
FNDC3B-201ENST00000336824 CCER2I3L3R5 266 aa12.25□□□□□ -0.45
FNDC3B-201ENST00000336824 AEBP2Q6ZN18 517 aaPredicted RBP12.24□□□□□ -0.45
FNDC3B-201ENST00000336824 ST20-MTHFSA0A0A6YYL1 179 aa12.24□□□□□ -0.45
FNDC3B-201ENST00000336824 U2SURPO15042 1029 aaKnown RBP12.24□□□□□ -0.45
FNDC3B-201ENST00000336824 ADGBQ8N7X0 1667 aa12.23□□□□□ -0.45
FNDC3B-201ENST00000336824 RPGRIP1LQ68CZ1 1315 aa12.23□□□□□ -0.45
FNDC3B-201ENST00000336824 ABCC10Q5T3U5 1492 aa12.23□□□□□ -0.45
FNDC3B-201ENST00000336824 UHRF1BP1LA0JNW5 1464 aa12.23□□□□□ -0.45
FNDC3B-201ENST00000336824 ERBINQ96RT1 1412 aa12.22□□□□□ -0.45
FNDC3B-201ENST00000336824 ABCA8O94911 1581 aa12.22□□□□□ -0.45
FNDC3B-201ENST00000336824 FAM135AQ9P2D6 1515 aa12.21□□□□□ -0.45
FNDC3B-201ENST00000336824 TCOF1Q13428 1488 aaKnown RBP12.21□□□□□ -0.45
FNDC3B-201ENST00000336824 DNMT1P26358 1616 aaKnown RBP12.21□□□□□ -0.45
FNDC3B-201ENST00000336824 ANKRD30BQ9BXX2 1392 aa12.21□□□□□ -0.45
FNDC3B-201ENST00000336824 SHANK2Q9UPX8 1470 aa12.21□□□□□ -0.46
FNDC3B-201ENST00000336824 TSPOAP1O95153 1857 aa12.21□□□□□ -0.46
FNDC3B-201ENST00000336824 DHX29Q7Z478 1369 aaKnown RBP12.2□□□□□ -0.46
FNDC3B-201ENST00000336824 CENPJQ9HC77 1338 aaPredicted RBP12.2□□□□□ -0.46
FNDC3B-201ENST00000336824 KDM5BQ9UGL1 1544 aa12.2□□□□□ -0.46
FNDC3B-201ENST00000336824 ZCCHC11Q5TAX3 1644 aaKnown RBP12.2□□□□□ -0.46
FNDC3B-201ENST00000336824 TXNDC2Q86VQ3 553 aa12.19□□□□□ -0.46
FNDC3B-201ENST00000336824 A2MP01023 1474 aa12.19□□□□□ -0.46
FNDC3B-201ENST00000336824 SOX12O15370 315 aa12.19□□□□□ -0.46
FNDC3B-201ENST00000336824 MYH16Q9H6N6 1097 aa12.19□□□□□ -0.46
FNDC3B-201ENST00000336824 CGNL1Q0VF96 1302 aa12.18□□□□□ -0.46
FNDC3B-201ENST00000336824 CFAP65Q6ZU64 1925 aaKnown RBP12.18□□□□□ -0.46
FNDC3B-201ENST00000336824 MINK1Q8N4C8 1332 aaPredicted RBP12.17□□□□□ -0.46
FNDC3B-201ENST00000336824 FKBP8Q14318 412 aa12.16□□□□□ -0.46
FNDC3B-201ENST00000336824 RTEL1-TNFRSF6BF6WH68 1400 aa12.16□□□□□ -0.46
FNDC3B-201ENST00000336824 BCL11AQ9H165 835 aa12.16□□□□□ -0.46
FNDC3B-201ENST00000336824 CALD1Q05682 793 aaKnown RBP12.16□□□□□ -0.46
FNDC3B-201ENST00000336824 ANKLE2Q86XL3 938 aa12.16□□□□□ -0.46
FNDC3B-201ENST00000336824 NEUROD2Q15784 382 aa12.15□□□□□ -0.46
FNDC3B-201ENST00000336824 RTF1Q92541 710 aaKnown RBP12.15□□□□□ -0.46
FNDC3B-201ENST00000336824 ATF3P18847 181 aa12.15□□□□□ -0.47
FNDC3B-201ENST00000336824 NLRP13Q86W25 1043 aa12.14□□□□□ -0.47
FNDC3B-201ENST00000336824 NEO1Q92859 1461 aa12.14□□□□□ -0.47
FNDC3B-201ENST00000336824 LAS1LQ9Y4W2 734 aaKnown RBP12.14□□□□□ -0.47
FNDC3B-201ENST00000336824 COG3Q96JB2 828 aa12.13□□□□□ -0.47
FNDC3B-201ENST00000336824 PANK3Q9H999 370 aa12.13□□□□□ -0.47
FNDC3B-201ENST00000336824 MYT1Q01538 1121 aa12.13□□□□□ -0.47
FNDC3B-201ENST00000336824 CSB-PGBD3P0DP91 1061 aa12.12□□□□□ -0.47
FNDC3B-201ENST00000336824 MS4A1P11836 297 aa12.12□□□□□ -0.47
FNDC3B-201ENST00000336824 CCDC136Q96JN2 1154 aa12.12□□□□□ -0.47
FNDC3B-201ENST00000336824 NUTM2FA1L443 756 aa12.12□□□□□ -0.47
FNDC3B-201ENST00000336824 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.12□□□□□ -0.479e-8■■□□□ 12.4
FNDC3B-201ENST00000336824 CHMP4BQ9H444 224 aaKnown RBP12.12□□□□□ -0.47
FNDC3B-201ENST00000336824 ATP7AQ04656 1500 aa12.12□□□□□ -0.47
FNDC3B-201ENST00000336824 AMPHP49418 695 aa12.12□□□□□ -0.47
FNDC3B-201ENST00000336824 U2AF1L5P0DN76 240 aaPredicted RBP12.11□□□□□ -0.47
FNDC3B-201ENST00000336824 U2AF1Q01081 240 aaKnown RBP eCLIP12.11□□□□□ -0.474e-10■■□□□ 13.6
FNDC3B-201ENST00000336824 PREX2Q70Z35 1606 aa12.11□□□□□ -0.47
FNDC3B-201ENST00000336824 ARHGEF5Q12774 1597 aa12.11□□□□□ -0.47
FNDC3B-201ENST00000336824 FTSJ3Q8IY81 847 aaKnown RBP12.11□□□□□ -0.47
FNDC3B-201ENST00000336824 TRAPPC8Q9Y2L5 1435 aa12.11□□□□□ -0.47
FNDC3B-201ENST00000336824 CHMP4AQ9BY43 222 aa12.1□□□□□ -0.47
FNDC3B-201ENST00000336824 MAPKBP1O60336 1514 aa12.1□□□□□ -0.47
FNDC3B-201ENST00000336824 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.1□□□□□ -0.471e-14■□□□□ 11
FNDC3B-201ENST00000336824 PSME1Q06323 249 aa12.1□□□□□ -0.47
FNDC3B-201ENST00000336824 MYBBP1AQ9BQG0 1328 aaKnown RBP12.1□□□□□ -0.47
FNDC3B-201ENST00000336824 GCC2Q8IWJ2 1684 aa12.1□□□□□ -0.47
FNDC3B-201ENST00000336824 CFAP70Q5T0N1 1121 aa12.1□□□□□ -0.47
FNDC3B-201ENST00000336824 TMEM132EQ6IEE7 984 aa12.09□□□□□ -0.47
FNDC3B-201ENST00000336824 UPF2Q9HAU5 1272 aaKnown RBP12.08□□□□□ -0.48
FNDC3B-201ENST00000336824 LMOD3Q0VAK6 560 aa12.07□□□□□ -0.48
FNDC3B-201ENST00000336824 CCDC7Q96M83 1385 aa12.07□□□□□ -0.48
FNDC3B-201ENST00000336824 CDC42BPAQ5VT25 1732 aa12.07□□□□□ -0.48
FNDC3B-201ENST00000336824 RPRD2Q5VT52 1461 aaKnown RBP12.06□□□□□ -0.48
FNDC3B-201ENST00000336824 ADGRL2O95490 1459 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms