RNA–Protein interactions for RNA: ENST00000336119.7

NLRP3-201, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 4,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-201ENST00000336119 DISP1Q96F81 1524 aa12.23□□□□□ -0.45
NLRP3-201ENST00000336119 KIF14Q15058 1648 aa12.23□□□□□ -0.45
NLRP3-201ENST00000336119 GGT6Q6P531 493 aa12.22□□□□□ -0.45
NLRP3-201ENST00000336119 STAC3Q96MF2 364 aa12.22□□□□□ -0.45
NLRP3-201ENST00000336119 NPM2Q86SE8 214 aaKnown RBP12.21□□□□□ -0.45
NLRP3-201ENST00000336119 CCDC141Q6ZP82 1450 aa12.21□□□□□ -0.46
NLRP3-201ENST00000336119 C11orf95C9JLR9 678 aaPredicted RBP12.2□□□□□ -0.46
NLRP3-201ENST00000336119 ANP32EQ9BTT0 268 aa12.2□□□□□ -0.46
NLRP3-201ENST00000336119 EIF3AQ14152 1382 aaKnown RBP12.2□□□□□ -0.46
NLRP3-201ENST00000336119 PDE3BQ13370 1112 aa12.2□□□□□ -0.46
NLRP3-201ENST00000336119 MAGI3Q5TCQ9 1506 aa12.2□□□□□ -0.46
NLRP3-201ENST00000336119 ATP10BO94823 1461 aa12.2□□□□□ -0.46
NLRP3-201ENST00000336119 PANK3Q9H999 370 aa12.2□□□□□ -0.46
NLRP3-201ENST00000336119 CFAP53Q96M91 514 aa12.19□□□□□ -0.46
NLRP3-201ENST00000336119 RCAN3Q9UKA8 241 aa12.18□□□□□ -0.46
NLRP3-201ENST00000336119 ITSN2Q9NZM3 1697 aa12.18□□□□□ -0.46
NLRP3-201ENST00000336119 AFAP1Q8N556 730 aa12.17□□□□□ -0.46
NLRP3-201ENST00000336119 ZBTB47Q9UFB7 747 aaPredicted RBP12.17□□□□□ -0.46
NLRP3-201ENST00000336119 CCDC184Q52MB2 194 aa12.16□□□□□ -0.46
NLRP3-201ENST00000336119 DNMT1P26358 1616 aaKnown RBP12.15□□□□□ -0.46
NLRP3-201ENST00000336119 BRD4O60885 1362 aaPredicted RBP12.14□□□□□ -0.47
NLRP3-201ENST00000336119 MLECQ14165 292 aa12.14□□□□□ -0.47
NLRP3-201ENST00000336119 NBPF1Q3BBV0 1214 aa12.14□□□□□ -0.47
NLRP3-201ENST00000336119 AEBP2Q6ZN18 517 aaPredicted RBP12.14□□□□□ -0.47
NLRP3-201ENST00000336119 MORC1Q86VD1 984 aa12.12□□□□□ -0.47
NLRP3-201ENST00000336119 WASHC2CQ9Y4E1 1318 aa12.12□□□□□ -0.47
NLRP3-201ENST00000336119 SENP3Q9H4L4 574 aaPredicted RBP12.12□□□□□ -0.47
NLRP3-201ENST00000336119 POGKQ9P215 609 aa12.11□□□□□ -0.47
NLRP3-201ENST00000336119 ASXL2Q76L83 1435 aa12.11□□□□□ -0.47
NLRP3-201ENST00000336119 CLASP1Q7Z460 1538 aa12.11□□□□□ -0.47
NLRP3-201ENST00000336119 RIMBP3CA6NJZ7 1639 aa12.11□□□□□ -0.47
NLRP3-201ENST00000336119 RIMBP3BA6NNM3 1639 aa12.11□□□□□ -0.47
NLRP3-201ENST00000336119 RIMBP3Q9UFD9 1639 aa12.11□□□□□ -0.47
NLRP3-201ENST00000336119 GCC2Q8IWJ2 1684 aa12.11□□□□□ -0.47
NLRP3-201ENST00000336119 PNISRQ8TF01 805 aaKnown RBP12.11□□□□□ -0.47
NLRP3-201ENST00000336119 TNNT2P45379 298 aaPredicted RBP12.1□□□□□ -0.47
NLRP3-201ENST00000336119 CD109Q6YHK3 1445 aa12.09□□□□□ -0.47
NLRP3-201ENST00000336119 ADGRL2O95490 1459 aa12.09□□□□□ -0.47
NLRP3-201ENST00000336119 NEUROD2Q15784 382 aa12.09□□□□□ -0.47
NLRP3-201ENST00000336119 SHANK2Q9UPX8 1470 aa12.09□□□□□ -0.47
NLRP3-201ENST00000336119 PZPP20742 1482 aa12.08□□□□□ -0.48
NLRP3-201ENST00000336119 ABCC2Q92887 1545 aa12.08□□□□□ -0.48
NLRP3-201ENST00000336119 ERCC6L2Q5T890 1561 aa12.08□□□□□ -0.48
NLRP3-201ENST00000336119 GOLGA2Q08379 1002 aa12.07□□□□□ -0.48
NLRP3-201ENST00000336119 TRAK1Q9UPV9 953 aa12.06□□□□□ -0.48
NLRP3-201ENST00000336119 RRP1P56182 461 aaKnown RBP12.06□□□□□ -0.48
NLRP3-201ENST00000336119 SRPK2P78362 688 aaKnown RBP12.06□□□□□ -0.48
NLRP3-201ENST00000336119 SCAPERQ9BY12 1400 aa12.05□□□□□ -0.48
NLRP3-201ENST00000336119 UPF2Q9HAU5 1272 aaKnown RBP12.05□□□□□ -0.48
NLRP3-201ENST00000336119 TCERG1O14776 1098 aaKnown RBP12.04□□□□□ -0.48
NLRP3-201ENST00000336119 VGFO15240 615 aaPredicted RBP12.04□□□□□ -0.48
NLRP3-201ENST00000336119 SAFB2Q14151 953 aaKnown RBP eCLIP12.04□□□□□ -0.48
NLRP3-201ENST00000336119 DDRGK1Q96HY6 314 aa12.04□□□□□ -0.48
NLRP3-201ENST00000336119 STK26Q9P289 416 aa12.04□□□□□ -0.48
NLRP3-201ENST00000336119 RALGAPBQ86X10 1494 aa12.04□□□□□ -0.48
NLRP3-201ENST00000336119 ERBINQ96RT1 1412 aa12.04□□□□□ -0.48
NLRP3-201ENST00000336119 RAPGEF3O95398 923 aa12.04□□□□□ -0.48
NLRP3-201ENST00000336119 TEX14Q8IWB6 1497 aa12.03□□□□□ -0.48
NLRP3-201ENST00000336119 NOP58Q9Y2X3 529 aaKnown RBP12.03□□□□□ -0.48
NLRP3-201ENST00000336119 SMG6Q86US8 1419 aaKnown RBP12.03□□□□□ -0.48
NLRP3-201ENST00000336119 MAPK8IP3Q9UPT6 1336 aa12.03□□□□□ -0.48
NLRP3-201ENST00000336119 NBR1Q14596 966 aa12.03□□□□□ -0.48
NLRP3-201ENST00000336119 PLCH2O75038 1416 aa12.02□□□□□ -0.48
NLRP3-201ENST00000336119 CFAP70Q5T0N1 1121 aa12.02□□□□□ -0.49
NLRP3-201ENST00000336119 WDR7Q9Y4E6 1490 aa12.02□□□□□ -0.49
NLRP3-201ENST00000336119 KDM6BO15054 1643 aa12.01□□□□□ -0.49
NLRP3-201ENST00000336119 U2SURPO15042 1029 aaKnown RBP12.01□□□□□ -0.49
NLRP3-201ENST00000336119 CCDC146Q8IYE0 955 aa12.01□□□□□ -0.49
NLRP3-201ENST00000336119 FRAT1Q92837 279 aaPredicted RBP12.01□□□□□ -0.49
NLRP3-201ENST00000336119 PNNQ9H307 717 aaKnown RBP12.01□□□□□ -0.49
NLRP3-201ENST00000336119 CENPJQ9HC77 1338 aaPredicted RBP12.01□□□□□ -0.49
NLRP3-201ENST00000336119 EXOC6Q8TAG9 804 aa12□□□□□ -0.49
NLRP3-201ENST00000336119 SYCP2Q9BX26 1530 aa12□□□□□ -0.49
NLRP3-201ENST00000336119 NUTM2DQ5VT03 806 aaPredicted RBP12□□□□□ -0.49
NLRP3-201ENST00000336119 NGEFQ8N5V2 710 aa12□□□□□ -0.49
NLRP3-201ENST00000336119 ARHGEF12Q9NZN5 1544 aa12□□□□□ -0.49
NLRP3-201ENST00000336119 FAM135AQ9P2D6 1515 aa12□□□□□ -0.49
NLRP3-201ENST00000336119 PPM1GO15355 546 aaPredicted RBP11.99□□□□□ -0.49
NLRP3-201ENST00000336119 HDGFP51858 240 aaKnown RBP11.99□□□□□ -0.49
NLRP3-201ENST00000336119 FANCIQ9NVI1 1328 aa11.99□□□□□ -0.49
NLRP3-201ENST00000336119 ABCA8O94911 1581 aa11.99□□□□□ -0.49
NLRP3-201ENST00000336119 HDGFL2Q7Z4V5 671 aaPredicted RBP11.99□□□□□ -0.49
NLRP3-201ENST00000336119 UHRF1BP1Q6BDS2 1440 aa11.99□□□□□ -0.49
NLRP3-201ENST00000336119 MS4A1P11836 297 aa11.99□□□□□ -0.49
NLRP3-201ENST00000336119 DUOX2Q9NRD8 1548 aa11.99□□□□□ -0.49
NLRP3-201ENST00000336119 ABCC10Q5T3U5 1492 aa11.98□□□□□ -0.49
NLRP3-201ENST00000336119 EVC2Q86UK5 1308 aa11.98□□□□□ -0.49
NLRP3-201ENST00000336119 U2AF1L5P0DN76 240 aaPredicted RBP11.98□□□□□ -0.49
NLRP3-201ENST00000336119 PPP2R1AP30153 589 aa11.98□□□□□ -0.49
NLRP3-201ENST00000336119 U2AF1Q01081 240 aaKnown RBP eCLIP11.98□□□□□ -0.49
NLRP3-201ENST00000336119 ADAMTS8Q9UP79 889 aa11.98□□□□□ -0.49
NLRP3-201ENST00000336119 RGS3P49796 1198 aa11.98□□□□□ -0.49
NLRP3-201ENST00000336119 FTSJ3Q8IY81 847 aaKnown RBP11.97□□□□□ -0.49
NLRP3-201ENST00000336119 TERF2IPQ9NYB0 399 aa11.97□□□□□ -0.49
NLRP3-201ENST00000336119 ADGBQ8N7X0 1667 aa11.97□□□□□ -0.49
NLRP3-201ENST00000336119 UHRF1BP1LA0JNW5 1464 aa11.97□□□□□ -0.49
NLRP3-201ENST00000336119 CGNL1Q0VF96 1302 aa11.96□□□□□ -0.49
NLRP3-201ENST00000336119 PRAG1Q86YV5 1406 aa11.96□□□□□ -0.49
NLRP3-201ENST00000336119 APAF1O14727 1248 aa11.96□□□□□ -0.49
NLRP3-201ENST00000336119 PLIN1O60240 522 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms