RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 RTF1Q92541 710 aaKnown RBP19.9■□□□□ 0.78
HDAC5-202ENST00000336057 ZRSR1Q15695 479 aaKnown RBP19.89■□□□□ 0.78
HDAC5-202ENST00000336057 TRAK1Q9UPV9 953 aa19.89■□□□□ 0.77
HDAC5-202ENST00000336057 MCCP23508 829 aa19.89■□□□□ 0.77
HDAC5-202ENST00000336057 WASHC2CQ9Y4E1 1318 aa19.88■□□□□ 0.77
HDAC5-202ENST00000336057 CRBNQ96SW2 442 aa19.87■□□□□ 0.77
HDAC5-202ENST00000336057 KCNJ4P48050 445 aa19.87■□□□□ 0.77
HDAC5-202ENST00000336057 GBP4Q96PP9 640 aa19.86■□□□□ 0.77
HDAC5-202ENST00000336057 APBB1O00213 710 aa19.86■□□□□ 0.77
HDAC5-202ENST00000336057 MFAP1P55081 439 aaKnown RBP19.86■□□□□ 0.77
HDAC5-202ENST00000336057 E9PSI1 815 aa19.86■□□□□ 0.77
HDAC5-202ENST00000336057 PLCB2Q00722 1185 aa19.85■□□□□ 0.77
HDAC5-202ENST00000336057 FAM161AQ3B820 660 aa19.85■□□□□ 0.77
HDAC5-202ENST00000336057 NUTM2DQ5VT03 806 aaPredicted RBP19.84■□□□□ 0.77
HDAC5-202ENST00000336057 USP35Q9P2H5 1018 aa19.84■□□□□ 0.77
HDAC5-202ENST00000336057 RRP7AQ9Y3A4 280 aaKnown RBP19.84■□□□□ 0.77
HDAC5-202ENST00000336057 ANKRD50Q9ULJ7 1429 aa19.84■□□□□ 0.77
HDAC5-202ENST00000336057 EFCAB5A4FU69 1503 aa19.83■□□□□ 0.77
HDAC5-202ENST00000336057 TIAM1Q13009 1591 aa19.83■□□□□ 0.76
HDAC5-202ENST00000336057 GZF1Q9H116 711 aaPredicted RBP19.82■□□□□ 0.76
HDAC5-202ENST00000336057 AQRO60306 1485 aaKnown RBP eCLIP19.82■□□□□ 0.768e-7■■■■□ 25.6
HDAC5-202ENST00000336057 MIA2Q96PC5 1412 aa19.81■□□□□ 0.76
HDAC5-202ENST00000336057 PTMSP20962 102 aa19.81■□□□□ 0.76
HDAC5-202ENST00000336057 APAF1O14727 1248 aa19.81■□□□□ 0.76
HDAC5-202ENST00000336057 FGD1P98174 961 aa19.81■□□□□ 0.76
HDAC5-202ENST00000336057 CGNL1Q0VF96 1302 aa19.8■□□□□ 0.76
HDAC5-202ENST00000336057 HFM1A2PYH4 1435 aa19.8■□□□□ 0.76
HDAC5-202ENST00000336057 MSNP26038 577 aaKnown RBP19.77■□□□□ 0.76
HDAC5-202ENST00000336057 NGEFQ8N5V2 710 aa19.77■□□□□ 0.76
HDAC5-202ENST00000336057 BCL2L13Q9BXK5 485 aa19.77■□□□□ 0.75
HDAC5-202ENST00000336057 PRDM2Q13029 1718 aa19.76■□□□□ 0.75
HDAC5-202ENST00000336057 BRD4O60885 1362 aaPredicted RBP19.76■□□□□ 0.75
HDAC5-202ENST00000336057 GOLGA6L4A6NEF3 574 aa19.76■□□□□ 0.75
HDAC5-202ENST00000336057 HMGXB3Q12766 1538 aa19.75■□□□□ 0.75
HDAC5-202ENST00000336057 LMOD3Q0VAK6 560 aa19.75■□□□□ 0.75
HDAC5-202ENST00000336057 COG6Q9Y2V7 657 aa19.75■□□□□ 0.75
HDAC5-202ENST00000336057 EHBP1L1Q8N3D4 1523 aa19.74■□□□□ 0.75
HDAC5-202ENST00000336057 SLC4A3P48751 1232 aa19.74■□□□□ 0.75
HDAC5-202ENST00000336057 VGFO15240 615 aaPredicted RBP19.74■□□□□ 0.75
HDAC5-202ENST00000336057 ZKSCAN2Q63HK3 967 aa19.74■□□□□ 0.75
HDAC5-202ENST00000336057 EVC2Q86UK5 1308 aa19.74■□□□□ 0.75
HDAC5-202ENST00000336057 GOLGA6L3A6NEY3 463 aa19.74■□□□□ 0.75
HDAC5-202ENST00000336057 STAC3Q96MF2 364 aa19.73■□□□□ 0.75
HDAC5-202ENST00000336057 STK31Q9BXU1 1019 aa19.73■□□□□ 0.75
HDAC5-202ENST00000336057 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.73■□□□□ 0.752e-6■■□□□ 11.5
HDAC5-202ENST00000336057 WDR97A6NE52 1622 aa19.72■□□□□ 0.75
HDAC5-202ENST00000336057 KIAA1211Q6ZU35 1233 aa19.72■□□□□ 0.75
HDAC5-202ENST00000336057 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.72■□□□□ 0.755e-6■■■□□ 14.8
HDAC5-202ENST00000336057 HMMRO75330 724 aa19.72■□□□□ 0.75
HDAC5-202ENST00000336057 GRIN2BQ13224 1484 aa19.72■□□□□ 0.75
HDAC5-202ENST00000336057 NBPF8Q3BBV2 869 aa19.71■□□□□ 0.75
HDAC5-202ENST00000336057 NAP1L2Q9ULW6 460 aaPredicted RBP19.69■□□□□ 0.74
HDAC5-202ENST00000336057 TOPBP1Q92547 1522 aa19.68■□□□□ 0.74
HDAC5-202ENST00000336057 PAK3O75914 559 aaPredicted RBP19.68■□□□□ 0.74
HDAC5-202ENST00000336057 POLA1P09884 1462 aaPredicted RBP19.68■□□□□ 0.74
HDAC5-202ENST00000336057 CHMP4AQ9BY43 222 aa19.67■□□□□ 0.74
HDAC5-202ENST00000336057 GOLGA6L6A8MZA4 724 aa19.66■□□□□ 0.74
HDAC5-202ENST00000336057 GSE1Q14687 1217 aa19.66■□□□□ 0.74
HDAC5-202ENST00000336057 SLC4A10Q6U841 1118 aa19.65■□□□□ 0.74
HDAC5-202ENST00000336057 KIAA1107Q9UPP5 1409 aa19.65■□□□□ 0.74
HDAC5-202ENST00000336057 NESP48681 1621 aa19.64■□□□□ 0.74
HDAC5-202ENST00000336057 TAOK2Q9UL54 1235 aa19.64■□□□□ 0.73
HDAC5-202ENST00000336057 ADAMTS8Q9UP79 889 aa19.64■□□□□ 0.73
HDAC5-202ENST00000336057 ELL2O00472 640 aaPredicted RBP19.63■□□□□ 0.73
HDAC5-202ENST00000336057 RUNDC1Q96C34 613 aa19.63■□□□□ 0.73
HDAC5-202ENST00000336057 FOXD4L1Q9NU39 408 aa19.63■□□□□ 0.73
HDAC5-202ENST00000336057 TRIM6-TRIM34B2RNG4 842 aa19.62■□□□□ 0.73
HDAC5-202ENST00000336057 CHAF1AQ13111 956 aaPredicted RBP19.62■□□□□ 0.73
HDAC5-202ENST00000336057 NAIPQ13075 1403 aa19.62■□□□□ 0.73
HDAC5-202ENST00000336057 NRDCO43847 1150 aa19.62■□□□□ 0.73
HDAC5-202ENST00000336057 ANKRD45Q5TZF3 282 aa19.62■□□□□ 0.73
HDAC5-202ENST00000336057 DDX19BQ9UMR2 479 aa19.62■□□□□ 0.73
HDAC5-202ENST00000336057 CDCA7LQ96GN5 454 aa19.61■□□□□ 0.73
HDAC5-202ENST00000336057 SYAP1Q96A49 352 aaPredicted RBP19.61■□□□□ 0.73
HDAC5-202ENST00000336057 MINK1Q8N4C8 1332 aaPredicted RBP19.61■□□□□ 0.73
HDAC5-202ENST00000336057 DZIP1LQ8IYY4 767 aaKnown RBP19.6■□□□□ 0.73
HDAC5-202ENST00000336057 DDX11L8A8MPP1 907 aa19.6■□□□□ 0.73
HDAC5-202ENST00000336057 NGDNQ8NEJ9 315 aaKnown RBP19.6■□□□□ 0.73
HDAC5-202ENST00000336057 CDK11BP21127 795 aaKnown RBP19.59■□□□□ 0.73
HDAC5-202ENST00000336057 PNISRQ8TF01 805 aaKnown RBP19.59■□□□□ 0.73
HDAC5-202ENST00000336057 SUPT6HQ7KZ85 1726 aaKnown RBP19.59■□□□□ 0.73
HDAC5-202ENST00000336057 ST18O60284 1047 aa19.59■□□□□ 0.73
HDAC5-202ENST00000336057 HECW1Q76N89 1606 aa19.59■□□□□ 0.73
HDAC5-202ENST00000336057 AMPHP49418 695 aa19.59■□□□□ 0.73
HDAC5-202ENST00000336057 DIAPH1O60610 1272 aaKnown RBP19.58■□□□□ 0.73
HDAC5-202ENST00000336057 CCDC184Q52MB2 194 aa19.58■□□□□ 0.73
HDAC5-202ENST00000336057 NBPF1Q3BBV0 1214 aa19.58■□□□□ 0.73
HDAC5-202ENST00000336057 COG3Q96JB2 828 aa19.58■□□□□ 0.72
HDAC5-202ENST00000336057 HDAC5Q9UQL6 1122 aa19.57■□□□□ 0.72
HDAC5-202ENST00000336057 DAPK1P53355 1430 aa19.57■□□□□ 0.72
HDAC5-202ENST00000336057 TROQ12816 1431 aaPredicted RBP19.57■□□□□ 0.72
HDAC5-202ENST00000336057 C9orf84Q5VXU9 1444 aa19.57■□□□□ 0.72
HDAC5-202ENST00000336057 EID1Q9Y6B2 187 aa19.57■□□□□ 0.72
HDAC5-202ENST00000336057 DRC7Q8IY82 874 aa19.56■□□□□ 0.72
HDAC5-202ENST00000336057 AKNAQ7Z591 1439 aa19.56■□□□□ 0.72
HDAC5-202ENST00000336057 PRG4Q92954 1404 aaPredicted RBP19.56■□□□□ 0.72
HDAC5-202ENST00000336057 RIPK4P57078 832 aa19.56■□□□□ 0.72
HDAC5-202ENST00000336057 DNMBPQ6XZF7 1577 aa19.56■□□□□ 0.72
HDAC5-202ENST00000336057 NUTM2FA1L443 756 aa19.56■□□□□ 0.72
HDAC5-202ENST00000336057 MAP3K1Q13233 1512 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms