RNA–Protein interactions for RNA: ENST00000335877.10

PSMF1-203, Transcript of proteasome inhibitor subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PSMF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMF1-203ENST00000335877 GOLGA2Q08379 1002 aa12.65□□□□□ -0.38
PSMF1-203ENST00000335877 MORC1Q86VD1 984 aa12.65□□□□□ -0.39
PSMF1-203ENST00000335877 POGKQ9P215 609 aa12.64□□□□□ -0.39
PSMF1-203ENST00000335877 SMG6Q86US8 1419 aaKnown RBP12.64□□□□□ -0.39
PSMF1-203ENST00000335877 TIAM1Q13009 1591 aa12.63□□□□□ -0.39
PSMF1-203ENST00000335877 DDX11L8A8MPP1 907 aa12.63□□□□□ -0.39
PSMF1-203ENST00000335877 U2SURPO15042 1029 aaKnown RBP12.63□□□□□ -0.39
PSMF1-203ENST00000335877 PLPPR3Q6T4P5 718 aa12.63□□□□□ -0.39
PSMF1-203ENST00000335877 ZMYND15Q9H091 742 aa12.63□□□□□ -0.39
PSMF1-203ENST00000335877 FOXD4L1Q9NU39 408 aa12.62□□□□□ -0.39
PSMF1-203ENST00000335877 RRP9O43818 475 aaKnown RBP12.62□□□□□ -0.39
PSMF1-203ENST00000335877 ZNF644Q9H582 1327 aaPredicted RBP12.62□□□□□ -0.39
PSMF1-203ENST00000335877 SKAP1Q86WV1 359 aa12.62□□□□□ -0.39
PSMF1-203ENST00000335877 CDCA7LQ96GN5 454 aa12.61□□□□□ -0.39
PSMF1-203ENST00000335877 EFCAB5A4FU69 1503 aa12.61□□□□□ -0.39
PSMF1-203ENST00000335877 CCDC144AA2RUR9 1427 aa12.61□□□□□ -0.39
PSMF1-203ENST00000335877 RWDD1Q9H446 243 aaPredicted RBP12.6□□□□□ -0.39
PSMF1-203ENST00000335877 C11orf95C9JLR9 678 aaPredicted RBP12.6□□□□□ -0.39
PSMF1-203ENST00000335877 PTMSP20962 102 aa12.6□□□□□ -0.39
PSMF1-203ENST00000335877 MRE11P49959 708 aa12.59□□□□□ -0.39
PSMF1-203ENST00000335877 CLUAP1Q96AJ1 413 aa12.59□□□□□ -0.39
PSMF1-203ENST00000335877 CHAF1AQ13111 956 aaPredicted RBP12.59□□□□□ -0.39
PSMF1-203ENST00000335877 PMFBP1Q8TBY8 1022 aa12.59□□□□□ -0.39
PSMF1-203ENST00000335877 HFM1A2PYH4 1435 aa12.58□□□□□ -0.4
PSMF1-203ENST00000335877 CCDC146Q8IYE0 955 aa12.58□□□□□ -0.4
PSMF1-203ENST00000335877 GGT6Q6P531 493 aa12.58□□□□□ -0.4
PSMF1-203ENST00000335877 CHMP5Q9NZZ3 219 aa12.58□□□□□ -0.4
PSMF1-203ENST00000335877 SPAG9O60271 1321 aaKnown RBP12.58□□□□□ -0.4
PSMF1-203ENST00000335877 CALD1Q05682 793 aaKnown RBP12.57□□□□□ -0.4
PSMF1-203ENST00000335877 EIF3AQ14152 1382 aaKnown RBP12.57□□□□□ -0.4
PSMF1-203ENST00000335877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.57□□□□□ -0.4
PSMF1-203ENST00000335877 CHMP4BQ9H444 224 aaKnown RBP12.57□□□□□ -0.4
PSMF1-203ENST00000335877 PANK3Q9H999 370 aa12.57□□□□□ -0.4
PSMF1-203ENST00000335877 KIF3BO15066 747 aa12.57□□□□□ -0.4
PSMF1-203ENST00000335877 SRPK2P78362 688 aaKnown RBP12.57□□□□□ -0.4
PSMF1-203ENST00000335877 KIAA2012Q0VF49 1180 aa12.57□□□□□ -0.4
PSMF1-203ENST00000335877 DDX49Q9Y6V7 483 aaKnown RBP12.56□□□□□ -0.4
PSMF1-203ENST00000335877 TRAK2O60296 914 aa12.56□□□□□ -0.4
PSMF1-203ENST00000335877 PNISRQ8TF01 805 aaKnown RBP12.56□□□□□ -0.4
PSMF1-203ENST00000335877 COG6Q9Y2V7 657 aa12.55□□□□□ -0.4
PSMF1-203ENST00000335877 PTPRGP23470 1445 aa12.55□□□□□ -0.4
PSMF1-203ENST00000335877 AQRO60306 1485 aaKnown RBP eCLIP12.55□□□□□ -0.41e-6■■■■■ 27.8
PSMF1-203ENST00000335877 RBM10P98175 930 aaKnown RBP12.55□□□□□ -0.4
PSMF1-203ENST00000335877 POLA1P09884 1462 aaPredicted RBP12.54□□□□□ -0.4
PSMF1-203ENST00000335877 SAFB2Q14151 953 aaKnown RBP eCLIP12.54□□□□□ -0.4
PSMF1-203ENST00000335877 TOPBP1Q92547 1522 aa12.54□□□□□ -0.4
PSMF1-203ENST00000335877 CENPJQ9HC77 1338 aaPredicted RBP12.54□□□□□ -0.4
PSMF1-203ENST00000335877 TPM2P07951 284 aa12.54□□□□□ -0.4
PSMF1-203ENST00000335877 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.54□□□□□ -0.4
PSMF1-203ENST00000335877 R3HCC1Q9Y3T6 440 aaKnown RBP12.53□□□□□ -0.4
PSMF1-203ENST00000335877 ESPNB1AK53 854 aa12.53□□□□□ -0.4
PSMF1-203ENST00000335877 U2AF1L5P0DN76 240 aaPredicted RBP12.53□□□□□ -0.4
PSMF1-203ENST00000335877 U2AF1Q01081 240 aaKnown RBP eCLIP12.53□□□□□ -0.4
PSMF1-203ENST00000335877 CASC1Q6TDU7 716 aa12.53□□□□□ -0.4
PSMF1-203ENST00000335877 ANKRD50Q9ULJ7 1429 aa12.53□□□□□ -0.4
PSMF1-203ENST00000335877 SKOR2Q2VWA4 1001 aaPredicted RBP12.52□□□□□ -0.4
PSMF1-203ENST00000335877 WASHC2CQ9Y4E1 1318 aa12.52□□□□□ -0.4
PSMF1-203ENST00000335877 EHBP1L1Q8N3D4 1523 aa12.52□□□□□ -0.41
PSMF1-203ENST00000335877 MIA2Q96PC5 1412 aa12.52□□□□□ -0.41
PSMF1-203ENST00000335877 CGNL1Q0VF96 1302 aa12.51□□□□□ -0.41
PSMF1-203ENST00000335877 NESP48681 1621 aa12.51□□□□□ -0.41
PSMF1-203ENST00000335877 MAP3K1Q13233 1512 aa12.51□□□□□ -0.41
PSMF1-203ENST00000335877 STK26Q9P289 416 aa12.5□□□□□ -0.41
PSMF1-203ENST00000335877 GRIN2BQ13224 1484 aa12.5□□□□□ -0.41
PSMF1-203ENST00000335877 ITPRIPQ8IWB1 547 aa12.5□□□□□ -0.41
PSMF1-203ENST00000335877 BCL2L13Q9BXK5 485 aa12.5□□□□□ -0.41
PSMF1-203ENST00000335877 NBPF8Q3BBV2 869 aa12.49□□□□□ -0.41
PSMF1-203ENST00000335877 NAIPQ13075 1403 aa12.49□□□□□ -0.41
PSMF1-203ENST00000335877 KIAA1211Q6ZU35 1233 aa12.49□□□□□ -0.41
PSMF1-203ENST00000335877 BRD4O60885 1362 aaPredicted RBP12.49□□□□□ -0.41
PSMF1-203ENST00000335877 MAP7D2Q96T17 732 aa12.49□□□□□ -0.41
PSMF1-203ENST00000335877 C14orf37Q86TY3 774 aa12.48□□□□□ -0.41
PSMF1-203ENST00000335877 IPO8O15397 1037 aaKnown RBP12.48□□□□□ -0.41
PSMF1-203ENST00000335877 HDGFL2Q7Z4V5 671 aaPredicted RBP12.48□□□□□ -0.41
PSMF1-203ENST00000335877 GRPEL1Q9HAV7 217 aa12.48□□□□□ -0.41
PSMF1-203ENST00000335877 NASPP49321 788 aaPredicted RBP12.48□□□□□ -0.41
PSMF1-203ENST00000335877 DNMBPQ6XZF7 1577 aa12.47□□□□□ -0.41
PSMF1-203ENST00000335877 APAF1O14727 1248 aa12.46□□□□□ -0.41
PSMF1-203ENST00000335877 MCM4P33991 863 aa12.46□□□□□ -0.41
PSMF1-203ENST00000335877 C22orf23Q9BZE7 217 aa12.46□□□□□ -0.41
PSMF1-203ENST00000335877 LAMC3Q9Y6N6 1575 aa12.46□□□□□ -0.41
PSMF1-203ENST00000335877 ABCA10Q8WWZ4 1543 aa12.46□□□□□ -0.41
PSMF1-203ENST00000335877 PRDM2Q13029 1718 aa12.45□□□□□ -0.42
PSMF1-203ENST00000335877 PCF11O94913 1555 aaKnown RBP12.45□□□□□ -0.42
PSMF1-203ENST00000335877 FOXD4L5Q5VV16 416 aaPredicted RBP12.45□□□□□ -0.42
PSMF1-203ENST00000335877 FOXD4L4Q8WXT5 416 aaPredicted RBP12.45□□□□□ -0.42
PSMF1-203ENST00000335877 TRAK1Q9UPV9 953 aa12.44□□□□□ -0.42
PSMF1-203ENST00000335877 MAPKBP1O60336 1514 aa12.44□□□□□ -0.42
PSMF1-203ENST00000335877 E9PSI1 815 aa12.44□□□□□ -0.42
PSMF1-203ENST00000335877 PANK1Q8TE04 598 aa12.44□□□□□ -0.42
PSMF1-203ENST00000335877 HAP1P54257 671 aaPredicted RBP12.43□□□□□ -0.42
PSMF1-203ENST00000335877 CSPP1Q1MSJ5 1256 aa12.43□□□□□ -0.42
PSMF1-203ENST00000335877 DRC7Q8IY82 874 aa12.43□□□□□ -0.42
PSMF1-203ENST00000335877 SMC4Q9NTJ3 1288 aa12.43□□□□□ -0.42
PSMF1-203ENST00000335877 RRP7AQ9Y3A4 280 aaKnown RBP12.43□□□□□ -0.42
PSMF1-203ENST00000335877 BIVM-ERCC5R4GMW8 1640 aa12.43□□□□□ -0.42
PSMF1-203ENST00000335877 KIAA1107Q9UPP5 1409 aa12.43□□□□□ -0.42
PSMF1-203ENST00000335877 SYAP1Q96A49 352 aaPredicted RBP12.42□□□□□ -0.42
PSMF1-203ENST00000335877 C20orf194Q5TEA3 1177 aa12.42□□□□□ -0.42
PSMF1-203ENST00000335877 ADAMTS8Q9UP79 889 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms