RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.83□□□□□ -0.36
TREM1-202ENST00000334475 MYO5CQ9NQX4 1742 aa12.82□□□□□ -0.36
TREM1-202ENST00000334475 NCOA1Q15788 1441 aa12.82□□□□□ -0.36
TREM1-202ENST00000334475 CHIC2Q9UKJ5 165 aa12.82□□□□□ -0.36
TREM1-202ENST00000334475 TTC37Q6PGP7 1564 aa12.81□□□□□ -0.36
TREM1-202ENST00000334475 NEUROD1Q13562 356 aa12.81□□□□□ -0.36
TREM1-202ENST00000334475 MAST1Q9Y2H9 1570 aa12.81□□□□□ -0.36
TREM1-202ENST00000334475 ANKRD30AQ9BXX3 1397 aa12.81□□□□□ -0.36
TREM1-202ENST00000334475 KDM5DQ9BY66 1539 aa12.79□□□□□ -0.36
TREM1-202ENST00000334475 SAMD9LQ8IVG5 1584 aa12.79□□□□□ -0.36
TREM1-202ENST00000334475 ILDR2Q71H61 639 aa12.79□□□□□ -0.36
TREM1-202ENST00000334475 MIER1Q8N108 512 aa12.78□□□□□ -0.36
TREM1-202ENST00000334475 MPHOSPH9Q99550 1183 aa12.78□□□□□ -0.36
TREM1-202ENST00000334475 ZNF644Q9H582 1327 aaPredicted RBP12.78□□□□□ -0.36
TREM1-202ENST00000334475 PLEKHH2Q8IVE3 1493 aa12.78□□□□□ -0.36
TREM1-202ENST00000334475 ZMYM4Q5VZL5 1548 aa12.78□□□□□ -0.36
TREM1-202ENST00000334475 RSPH4AQ5TD94 716 aa12.77□□□□□ -0.37
TREM1-202ENST00000334475 TRIM52Q96A61 297 aa12.77□□□□□ -0.37
TREM1-202ENST00000334475 C9orf84Q5VXU9 1444 aa12.77□□□□□ -0.37
TREM1-202ENST00000334475 FANCAO15360 1455 aa12.77□□□□□ -0.37
TREM1-202ENST00000334475 RPRD2Q5VT52 1461 aaKnown RBP12.77□□□□□ -0.37
TREM1-202ENST00000334475 CCDC141Q6ZP82 1450 aa12.77□□□□□ -0.37
TREM1-202ENST00000334475 MLECQ14165 292 aa12.76□□□□□ -0.37
TREM1-202ENST00000334475 CERKQ8TCT0 537 aa12.76□□□□□ -0.37
TREM1-202ENST00000334475 PZPP20742 1482 aa12.76□□□□□ -0.37
TREM1-202ENST00000334475 CEBPAP49715 358 aaPredicted RBP12.75□□□□□ -0.37
TREM1-202ENST00000334475 ANKRD30BQ9BXX2 1392 aa12.75□□□□□ -0.37
TREM1-202ENST00000334475 MBD5Q9P267 1494 aa12.75□□□□□ -0.37
TREM1-202ENST00000334475 ATF5Q9Y2D1 282 aaPredicted RBP12.75□□□□□ -0.37
TREM1-202ENST00000334475 PLXNC1O60486 1568 aa12.74□□□□□ -0.37
TREM1-202ENST00000334475 ZFYVE16Q7Z3T8 1539 aa12.74□□□□□ -0.37
TREM1-202ENST00000334475 ANKRD50Q9ULJ7 1429 aa12.74□□□□□ -0.37
TREM1-202ENST00000334475 ATXN8OSP0DMR3 200 aa12.74□□□□□ -0.37
TREM1-202ENST00000334475 STRCQ7RTU9 1775 aa12.73□□□□□ -0.37
TREM1-202ENST00000334475 ARHGEF12Q9NZN5 1544 aa12.72□□□□□ -0.37
TREM1-202ENST00000334475 KIAA1107Q9UPP5 1409 aa12.72□□□□□ -0.37
TREM1-202ENST00000334475 FER1L4A9Z1Z3 1794 aa12.72□□□□□ -0.37
TREM1-202ENST00000334475 ARHGAP5Q13017 1502 aa12.72□□□□□ -0.37
TREM1-202ENST00000334475 POLA2Q14181 598 aa12.71□□□□□ -0.37
TREM1-202ENST00000334475 ZNF777Q9ULD5 760 aaPredicted RBP12.71□□□□□ -0.37
TREM1-202ENST00000334475 POGZQ7Z3K3 1410 aa12.71□□□□□ -0.38
TREM1-202ENST00000334475 SCAPERQ9BY12 1400 aa12.71□□□□□ -0.38
TREM1-202ENST00000334475 UNC13BO14795 1591 aa12.7□□□□□ -0.38
TREM1-202ENST00000334475 TSPY4P0CV99 314 aa12.7□□□□□ -0.38
TREM1-202ENST00000334475 TSPY10P0CW01 314 aa12.7□□□□□ -0.38
TREM1-202ENST00000334475 POLR1AO95602 1720 aaPredicted RBP12.7□□□□□ -0.38
TREM1-202ENST00000334475 SYCP2Q9BX26 1530 aa12.69□□□□□ -0.38
TREM1-202ENST00000334475 PLCH2O75038 1416 aa12.69□□□□□ -0.38
TREM1-202ENST00000334475 CFAP74Q9C0B2 1584 aa12.68□□□□□ -0.38
TREM1-202ENST00000334475 KIF15Q9NS87 1388 aa12.67□□□□□ -0.38
TREM1-202ENST00000334475 ABCC1P33527 1531 aa12.67□□□□□ -0.38
TREM1-202ENST00000334475 ATP10AO60312 1499 aa12.66□□□□□ -0.38
TREM1-202ENST00000334475 MAGI2Q86UL8 1455 aa12.66□□□□□ -0.38
TREM1-202ENST00000334475 PREX1Q8TCU6 1659 aa12.64□□□□□ -0.39
TREM1-202ENST00000334475 DUOX2Q9NRD8 1548 aa12.64□□□□□ -0.39
TREM1-202ENST00000334475 IQGAP3Q86VI3 1631 aa12.64□□□□□ -0.39
TREM1-202ENST00000334475 AFAP1Q8N556 730 aa12.64□□□□□ -0.39
TREM1-202ENST00000334475 L3MBTL2Q969R5 705 aa12.62□□□□□ -0.39
TREM1-202ENST00000334475 ERBINQ96RT1 1412 aa12.62□□□□□ -0.39
TREM1-202ENST00000334475 DIP2CQ9Y2E4 1556 aa12.61□□□□□ -0.39
TREM1-202ENST00000334475 NUP155O75694 1391 aa12.61□□□□□ -0.39
TREM1-202ENST00000334475 DISP3Q9P2K9 1392 aa12.61□□□□□ -0.39
TREM1-202ENST00000334475 HNRNPMP52272 730 aaKnown RBP eCLIP12.61□□□□□ -0.39
TREM1-202ENST00000334475 LTBP4Q8N2S1 1624 aa12.61□□□□□ -0.39
TREM1-202ENST00000334475 FAM135AQ9P2D6 1515 aa12.61□□□□□ -0.39
TREM1-202ENST00000334475 KDM5CP41229 1560 aa12.6□□□□□ -0.39
TREM1-202ENST00000334475 ABCA6Q8N139 1617 aa12.6□□□□□ -0.39
TREM1-202ENST00000334475 EIF4G2P78344 907 aaKnown RBP eCLIP12.6□□□□□ -0.39
TREM1-202ENST00000334475 EFCAB2Q5VUJ9 269 aa12.6□□□□□ -0.39
TREM1-202ENST00000334475 RTEL1-TNFRSF6BF6WH68 1400 aa12.6□□□□□ -0.39
TREM1-202ENST00000334475 C3P01024 1663 aa12.6□□□□□ -0.39
TREM1-202ENST00000334475 CCER2I3L3R5 266 aa12.59□□□□□ -0.39
TREM1-202ENST00000334475 UHRF1BP1Q6BDS2 1440 aa12.59□□□□□ -0.39
TREM1-202ENST00000334475 SOCS7O14512 581 aa12.58□□□□□ -0.4
TREM1-202ENST00000334475 DDX10Q13206 875 aaKnown RBP12.58□□□□□ -0.4
TREM1-202ENST00000334475 PKD2Q13563 968 aa12.58□□□□□ -0.4
TREM1-202ENST00000334475 TRAPPC8Q9Y2L5 1435 aa12.58□□□□□ -0.4
TREM1-202ENST00000334475 YTHDC1Q96MU7 727 aaKnown RBP12.57□□□□□ -0.4
TREM1-202ENST00000334475 ZBTB12Q9Y330 459 aaPredicted RBP12.57□□□□□ -0.4
TREM1-202ENST00000334475 INO80Q9ULG1 1556 aaPredicted RBP12.56□□□□□ -0.4
TREM1-202ENST00000334475 RALGAPBQ86X10 1494 aa12.55□□□□□ -0.4
TREM1-202ENST00000334475 ANP32CO43423 234 aa12.55□□□□□ -0.4
TREM1-202ENST00000334475 HSPA5P11021 654 aaKnown RBP12.55□□□□□ -0.4
TREM1-202ENST00000334475 DEPDC5O75140 1603 aa12.55□□□□□ -0.4
TREM1-202ENST00000334475 EIF2AK4Q9P2K8 1649 aaKnown RBP12.55□□□□□ -0.4
TREM1-202ENST00000334475 SPATA31E1Q6ZUB1 1445 aa12.54□□□□□ -0.4
TREM1-202ENST00000334475 ZNF518AQ6AHZ1 1483 aa12.54□□□□□ -0.4
TREM1-202ENST00000334475 PTPRTO14522 1441 aa12.54□□□□□ -0.4
TREM1-202ENST00000334475 REREQ9P2R6 1566 aa12.53□□□□□ -0.4
TREM1-202ENST00000334475 KIDINS220Q9ULH0 1771 aa12.53□□□□□ -0.4
TREM1-202ENST00000334475 CNTLNQ9NXG0 1405 aa12.53□□□□□ -0.4
TREM1-202ENST00000334475 SPATA31D1Q6ZQQ2 1576 aa12.52□□□□□ -0.4
TREM1-202ENST00000334475 NBPF8Q3BBV2 869 aa12.52□□□□□ -0.41
TREM1-202ENST00000334475 GTF3C3Q9Y5Q9 886 aa12.52□□□□□ -0.41
TREM1-202ENST00000334475 MLH3Q9UHC1 1453 aa12.52□□□□□ -0.41
TREM1-202ENST00000334475 LAMC1P11047 1609 aa12.51□□□□□ -0.41
TREM1-202ENST00000334475 ATP7AQ04656 1500 aa12.51□□□□□ -0.41
TREM1-202ENST00000334475 SETD1BQ9UPS6 1966 aaKnown RBP12.5□□□□□ -0.41
TREM1-202ENST00000334475 RBM42Q9BTD8 480 aaKnown RBP12.5□□□□□ -0.41
TREM1-202ENST00000334475 CCDC7Q96M83 1385 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms