RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16■□□□□ 0.15
HDAC6-201ENST00000334136 ABCC10Q5T3U5 1492 aa15.99■□□□□ 0.15
HDAC6-201ENST00000334136 SUPT16HQ9Y5B9 1047 aaKnown RBP15.99■□□□□ 0.15
HDAC6-201ENST00000334136 VGFO15240 615 aaPredicted RBP15.98■□□□□ 0.15
HDAC6-201ENST00000334136 AEBP2Q6ZN18 517 aaPredicted RBP15.97■□□□□ 0.15
HDAC6-201ENST00000334136 ADCY10Q96PN6 1610 aa15.96■□□□□ 0.15
HDAC6-201ENST00000334136 NEO1Q92859 1461 aa15.96■□□□□ 0.15
HDAC6-201ENST00000334136 TMC1Q8TDI8 760 aa15.96■□□□□ 0.14
HDAC6-201ENST00000334136 PTPRKQ15262 1439 aa15.95■□□□□ 0.14
HDAC6-201ENST00000334136 TCOF1Q13428 1488 aaKnown RBP15.95■□□□□ 0.14
HDAC6-201ENST00000334136 SAFB2Q14151 953 aaKnown RBP eCLIP15.95■□□□□ 0.14
HDAC6-201ENST00000334136 NBR1Q14596 966 aa15.94■□□□□ 0.14
HDAC6-201ENST00000334136 NPM2Q86SE8 214 aaKnown RBP15.94■□□□□ 0.14
HDAC6-201ENST00000334136 A2MP01023 1474 aa15.94■□□□□ 0.14
HDAC6-201ENST00000334136 CDCA8Q53HL2 280 aa15.94■□□□□ 0.14
HDAC6-201ENST00000334136 FAM9BQ8IZU0 186 aa15.94■□□□□ 0.14
HDAC6-201ENST00000334136 SLC52A1Q9NWF4 448 aa15.93■□□□□ 0.14
HDAC6-201ENST00000334136 PPP6R1Q9UPN7 881 aa15.92■□□□□ 0.14
HDAC6-201ENST00000334136 TSPOAP1O95153 1857 aa15.92■□□□□ 0.14
HDAC6-201ENST00000334136 ROCK2O75116 1388 aaKnown RBP15.91■□□□□ 0.14
HDAC6-201ENST00000334136 MYO5CQ9NQX4 1742 aa15.91■□□□□ 0.14
HDAC6-201ENST00000334136 CEBPAP49715 358 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-201ENST00000334136 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.9■□□□□ 0.14
HDAC6-201ENST00000334136 RTEL1-TNFRSF6BF6WH68 1400 aa15.89■□□□□ 0.14
HDAC6-201ENST00000334136 TTC37Q6PGP7 1564 aa15.89■□□□□ 0.13
HDAC6-201ENST00000334136 SLC24A1O60721 1099 aa15.89■□□□□ 0.13
HDAC6-201ENST00000334136 ANP32AP39687 249 aaKnown RBP15.89■□□□□ 0.13
HDAC6-201ENST00000334136 THEMISQ8N1K5 641 aaPredicted RBP15.88■□□□□ 0.13
HDAC6-201ENST00000334136 FBXO31Q5XUX0 539 aaPredicted RBP15.88■□□□□ 0.13
HDAC6-201ENST00000334136 DUOX2Q9NRD8 1548 aa15.87■□□□□ 0.13
HDAC6-201ENST00000334136 TMF1P82094 1093 aa15.86■□□□□ 0.13
HDAC6-201ENST00000334136 TXNDC2Q86VQ3 553 aa15.86■□□□□ 0.13
HDAC6-201ENST00000334136 MAPKBP1O60336 1514 aa15.86■□□□□ 0.13
HDAC6-201ENST00000334136 STAC3Q96MF2 364 aa15.85■□□□□ 0.13
HDAC6-201ENST00000334136 TRAK1Q9UPV9 953 aa15.85■□□□□ 0.13
HDAC6-201ENST00000334136 SRPK2P78362 688 aaKnown RBP15.85■□□□□ 0.13
HDAC6-201ENST00000334136 SHANK2Q9UPX8 1470 aa15.85■□□□□ 0.13
HDAC6-201ENST00000334136 HSPA5P11021 654 aaKnown RBP15.84■□□□□ 0.13
HDAC6-201ENST00000334136 PLEKHG5O94827 1062 aa15.84■□□□□ 0.13
HDAC6-201ENST00000334136 ERBINQ96RT1 1412 aa15.84■□□□□ 0.13
HDAC6-201ENST00000334136 ATP10AO60312 1499 aa15.83■□□□□ 0.12
HDAC6-201ENST00000334136 CFAP74Q9C0B2 1584 aa15.83■□□□□ 0.12
HDAC6-201ENST00000334136 DNMT1P26358 1616 aaKnown RBP15.83■□□□□ 0.12
HDAC6-201ENST00000334136 ATP7AQ04656 1500 aa15.83■□□□□ 0.12
HDAC6-201ENST00000334136 MBD5Q9P267 1494 aa15.82■□□□□ 0.12
HDAC6-201ENST00000334136 IDI1Q13907 227 aa15.8■□□□□ 0.12
HDAC6-201ENST00000334136 SENP3-EIF4A1A0A087X0R7 540 aa15.79■□□□□ 0.12
HDAC6-201ENST00000334136 SALL2Q9Y467 1007 aaPredicted RBP15.79■□□□□ 0.12
HDAC6-201ENST00000334136 PREX2Q70Z35 1606 aa15.79■□□□□ 0.12
HDAC6-201ENST00000334136 SAMD9LQ8IVG5 1584 aa15.79■□□□□ 0.12
HDAC6-201ENST00000334136 BCL11AQ9H165 835 aa15.79■□□□□ 0.12
HDAC6-201ENST00000334136 YEATS2Q9ULM3 1422 aa15.79■□□□□ 0.12
HDAC6-201ENST00000334136 EIF3AQ14152 1382 aaKnown RBP15.78■□□□□ 0.12
HDAC6-201ENST00000334136 LMOD2Q6P5Q4 547 aa15.78■□□□□ 0.12
HDAC6-201ENST00000334136 ANKLE2Q86XL3 938 aa15.78■□□□□ 0.12
HDAC6-201ENST00000334136 KNSTRNQ9Y448 316 aa15.77■□□□□ 0.12
HDAC6-201ENST00000334136 EIF5BO60841 1220 aaKnown RBP15.77■□□□□ 0.11
HDAC6-201ENST00000334136 ABCC1P33527 1531 aa15.76■□□□□ 0.11
HDAC6-201ENST00000334136 NEFMP07197 916 aa15.76■□□□□ 0.11
HDAC6-201ENST00000334136 ZFYVE16Q7Z3T8 1539 aa15.76■□□□□ 0.11
HDAC6-201ENST00000334136 ARHGEF5Q12774 1597 aa15.76■□□□□ 0.11
HDAC6-201ENST00000334136 CFAP70Q5T0N1 1121 aa15.76■□□□□ 0.11
HDAC6-201ENST00000334136 CCDC136Q96JN2 1154 aa15.76■□□□□ 0.11
HDAC6-201ENST00000334136 TMEM132EQ6IEE7 984 aa15.75■□□□□ 0.11
HDAC6-201ENST00000334136 ADGRL2O95490 1459 aa15.75■□□□□ 0.11
HDAC6-201ENST00000334136 ANKRD30BQ9BXX2 1392 aa15.75■□□□□ 0.11
HDAC6-201ENST00000334136 MRS2Q9HD23 443 aa15.75■□□□□ 0.11
HDAC6-201ENST00000334136 ST20-MTHFSA0A0A6YYL1 179 aa15.75■□□□□ 0.11
HDAC6-201ENST00000334136 TSHZ2Q9NRE2 1034 aa15.75■□□□□ 0.11
HDAC6-201ENST00000334136 CDC42BPAQ5VT25 1732 aa15.74■□□□□ 0.11
HDAC6-201ENST00000334136 ARAP3Q8WWN8 1544 aa15.74■□□□□ 0.11
HDAC6-201ENST00000334136 RPGRIP1LQ68CZ1 1315 aa15.74■□□□□ 0.11
HDAC6-201ENST00000334136 ABCA9Q8IUA7 1624 aa15.74■□□□□ 0.11
HDAC6-201ENST00000334136 HAP1P54257 671 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-201ENST00000334136 NUTM2FA1L443 756 aa15.73■□□□□ 0.11
HDAC6-201ENST00000334136 ARHGEF12Q9NZN5 1544 aa15.73■□□□□ 0.11
HDAC6-201ENST00000334136 MLH3Q9UHC1 1453 aa15.73■□□□□ 0.11
HDAC6-201ENST00000334136 TNRQ92752 1358 aa15.72■□□□□ 0.11
HDAC6-201ENST00000334136 ZBTB7CA1YPR0 619 aa15.72■□□□□ 0.11
HDAC6-201ENST00000334136 SLC26A8Q96RN1 970 aa15.72■□□□□ 0.11
HDAC6-201ENST00000334136 MAGI2Q86UL8 1455 aa15.72■□□□□ 0.11
HDAC6-201ENST00000334136 ZMYM3Q14202 1370 aa15.71■□□□□ 0.11
HDAC6-201ENST00000334136 ZBTB47Q9UFB7 747 aaPredicted RBP15.71■□□□□ 0.11
HDAC6-201ENST00000334136 RBM19Q9Y4C8 960 aaKnown RBP15.7■□□□□ 0.1
HDAC6-201ENST00000334136 MINK1Q8N4C8 1332 aaPredicted RBP15.7■□□□□ 0.1
HDAC6-201ENST00000334136 LRRIQ1Q96JM4 1722 aa15.68■□□□□ 0.1
HDAC6-201ENST00000334136 FAM135AQ9P2D6 1515 aa15.68■□□□□ 0.1
HDAC6-201ENST00000334136 HDGFL2Q7Z4V5 671 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-201ENST00000334136 KDM6BO15054 1643 aa15.67■□□□□ 0.1
HDAC6-201ENST00000334136 USP47Q96K76 1375 aa15.67■□□□□ 0.1
HDAC6-201ENST00000334136 NBPF1Q3BBV0 1214 aa15.67■□□□□ 0.1
HDAC6-201ENST00000334136 CNTLNQ9NXG0 1405 aa15.67■□□□□ 0.1
HDAC6-201ENST00000334136 NBPF8Q3BBV2 869 aa15.65■□□□□ 0.1
HDAC6-201ENST00000334136 CENPJQ9HC77 1338 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-201ENST00000334136 CDC42BPBQ9Y5S2 1711 aa15.65■□□□□ 0.1
HDAC6-201ENST00000334136 PPM1GO15355 546 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-201ENST00000334136 NGDNQ8NEJ9 315 aaKnown RBP15.65■□□□□ 0.1
HDAC6-201ENST00000334136 HECW2Q9P2P5 1572 aa15.64■□□□□ 0.09
HDAC6-201ENST00000334136 EVC2Q86UK5 1308 aa15.64■□□□□ 0.09
HDAC6-201ENST00000334136 DIP2BQ9P265 1576 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms