RNA–Protein interactions for RNA: ENST00000332981.9

PRKCH-201, Transcript of protein kinase C eta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCH, Length 3,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-201ENST00000332981 GRIN2BQ13224 1484 aa17.5■□□□□ 0.39
PRKCH-201ENST00000332981 DDRGK1Q96HY6 314 aa17.49■□□□□ 0.39
PRKCH-201ENST00000332981 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
PRKCH-201ENST00000332981 PANK1Q8TE04 598 aa17.49■□□□□ 0.39
PRKCH-201ENST00000332981 CFAP43Q8NDM7 1665 aa17.49■□□□□ 0.39
PRKCH-201ENST00000332981 PLB1Q6P1J6 1458 aa17.48■□□□□ 0.39
PRKCH-201ENST00000332981 GOLGA2Q08379 1002 aa17.48■□□□□ 0.39
PRKCH-201ENST00000332981 DENND4BO75064 1496 aaPredicted RBP17.47■□□□□ 0.39
PRKCH-201ENST00000332981 KIAA1107Q9UPP5 1409 aa17.45■□□□□ 0.38
PRKCH-201ENST00000332981 CCDC144AA2RUR9 1427 aa17.45■□□□□ 0.38
PRKCH-201ENST00000332981 ZNF608Q9ULD9 1512 aaPredicted RBP17.43■□□□□ 0.38
PRKCH-201ENST00000332981 UGGT2Q9NYU1 1516 aa17.43■□□□□ 0.38
PRKCH-201ENST00000332981 U2SURPO15042 1029 aaKnown RBP17.43■□□□□ 0.38
PRKCH-201ENST00000332981 GSE1Q14687 1217 aa17.42■□□□□ 0.38
PRKCH-201ENST00000332981 ARID3AQ99856 593 aa17.42■□□□□ 0.38
PRKCH-201ENST00000332981 NAP1L5Q96NT1 182 aaPredicted RBP17.41■□□□□ 0.38
PRKCH-201ENST00000332981 FOXD4L1Q9NU39 408 aa17.41■□□□□ 0.38
PRKCH-201ENST00000332981 TRAK1Q9UPV9 953 aa17.41■□□□□ 0.38
PRKCH-201ENST00000332981 ERCC6Q03468 1493 aa17.41■□□□□ 0.38
PRKCH-201ENST00000332981 BRD4O60885 1362 aaPredicted RBP17.4■□□□□ 0.38
PRKCH-201ENST00000332981 MIA2Q96PC5 1412 aa17.39■□□□□ 0.37
PRKCH-201ENST00000332981 PPP2R1AP30153 589 aa17.39■□□□□ 0.37
PRKCH-201ENST00000332981 TPRNQ4KMQ1 711 aa17.39■□□□□ 0.37
PRKCH-201ENST00000332981 UPF2Q9HAU5 1272 aaKnown RBP17.39■□□□□ 0.37
PRKCH-201ENST00000332981 STK26Q9P289 416 aa17.39■□□□□ 0.37
PRKCH-201ENST00000332981 DISP3Q9P2K9 1392 aa17.39■□□□□ 0.37
PRKCH-201ENST00000332981 KDM5BQ9UGL1 1544 aa17.38■□□□□ 0.37
PRKCH-201ENST00000332981 PDE3BQ13370 1112 aa17.38■□□□□ 0.37
PRKCH-201ENST00000332981 FAM161AQ3B820 660 aa17.38■□□□□ 0.37
PRKCH-201ENST00000332981 AFAP1Q8N556 730 aa17.37■□□□□ 0.37
PRKCH-201ENST00000332981 SPINK5Q9NQ38 1064 aaPredicted RBP17.37■□□□□ 0.37
PRKCH-201ENST00000332981 HSP90AA1P07900 732 aaKnown RBP17.37■□□□□ 0.37
PRKCH-201ENST00000332981 KIF3BO15066 747 aa17.36■□□□□ 0.37
PRKCH-201ENST00000332981 ARHGEF11O15085 1522 aa17.36■□□□□ 0.37
PRKCH-201ENST00000332981 MFAP1P55081 439 aaKnown RBP17.35■□□□□ 0.37
PRKCH-201ENST00000332981 MORC1Q86VD1 984 aa17.35■□□□□ 0.37
PRKCH-201ENST00000332981 TEX14Q8IWB6 1497 aa17.35■□□□□ 0.37
PRKCH-201ENST00000332981 CFAP70Q5T0N1 1121 aa17.35■□□□□ 0.37
PRKCH-201ENST00000332981 FTSJ3Q8IY81 847 aaKnown RBP17.35■□□□□ 0.37
PRKCH-201ENST00000332981 TNNQ9UQP3 1299 aa17.35■□□□□ 0.37
PRKCH-201ENST00000332981 GGT6Q6P531 493 aa17.35■□□□□ 0.37
PRKCH-201ENST00000332981 PLPPR3Q6T4P5 718 aa17.35■□□□□ 0.37
PRKCH-201ENST00000332981 CAMSAP2Q08AD1 1489 aa17.34■□□□□ 0.37
PRKCH-201ENST00000332981 C9orf84Q5VXU9 1444 aa17.34■□□□□ 0.37
PRKCH-201ENST00000332981 SPATA31E1Q6ZUB1 1445 aa17.34■□□□□ 0.37
PRKCH-201ENST00000332981 SLC24A1O60721 1099 aa17.34■□□□□ 0.37
PRKCH-201ENST00000332981 TMEM132EQ6IEE7 984 aa17.34■□□□□ 0.37
PRKCH-201ENST00000332981 U2AF1L5P0DN76 240 aaPredicted RBP17.33■□□□□ 0.37
PRKCH-201ENST00000332981 U2AF1Q01081 240 aaKnown RBP eCLIP17.33■□□□□ 0.37
PRKCH-201ENST00000332981 CENPQQ7L2Z9 268 aaPredicted RBP17.33■□□□□ 0.36
PRKCH-201ENST00000332981 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
PRKCH-201ENST00000332981 HECW1Q76N89 1606 aa17.32■□□□□ 0.36
PRKCH-201ENST00000332981 ZBTB7CA1YPR0 619 aa17.31■□□□□ 0.36
PRKCH-201ENST00000332981 ELL2O00472 640 aaPredicted RBP17.31■□□□□ 0.36
PRKCH-201ENST00000332981 MS4A1P11836 297 aa17.3■□□□□ 0.36
PRKCH-201ENST00000332981 PZPP20742 1482 aa17.3■□□□□ 0.36
PRKCH-201ENST00000332981 IQGAP2Q13576 1575 aa17.3■□□□□ 0.36
PRKCH-201ENST00000332981 TROQ12816 1431 aaPredicted RBP17.3■□□□□ 0.36
PRKCH-201ENST00000332981 IGHDP01880 384 aa17.3■□□□□ 0.36
PRKCH-201ENST00000332981 POGKQ9P215 609 aa17.3■□□□□ 0.36
PRKCH-201ENST00000332981 CENPJQ9HC77 1338 aaPredicted RBP17.3■□□□□ 0.36
PRKCH-201ENST00000332981 APBB1O00213 710 aa17.29■□□□□ 0.36
PRKCH-201ENST00000332981 PLEKHG5O94827 1062 aa17.29■□□□□ 0.36
PRKCH-201ENST00000332981 SEC24BO95487 1268 aa17.29■□□□□ 0.36
PRKCH-201ENST00000332981 VSIG10Q8N0Z9 540 aa17.29■□□□□ 0.36
PRKCH-201ENST00000332981 CTTNBP2Q8WZ74 1663 aa17.29■□□□□ 0.36
PRKCH-201ENST00000332981 CARMIL2Q6F5E8 1435 aa17.29■□□□□ 0.36
PRKCH-201ENST00000332981 CUL7Q14999 1698 aa17.28■□□□□ 0.36
PRKCH-201ENST00000332981 PER1O15534 1290 aaPredicted RBP17.28■□□□□ 0.36
PRKCH-201ENST00000332981 ROCK1Q13464 1354 aa17.28■□□□□ 0.36
PRKCH-201ENST00000332981 NUP153P49790 1475 aaKnown RBP17.28■□□□□ 0.36
PRKCH-201ENST00000332981 BECN1Q14457 450 aa17.28■□□□□ 0.36
PRKCH-201ENST00000332981 DUSP27Q5VZP5 1158 aa17.28■□□□□ 0.36
PRKCH-201ENST00000332981 SLC12A5Q9H2X9 1139 aa17.26■□□□□ 0.35
PRKCH-201ENST00000332981 ITPRIPQ8IWB1 547 aa17.26■□□□□ 0.35
PRKCH-201ENST00000332981 PLEKHH1Q9ULM0 1364 aa17.26■□□□□ 0.35
PRKCH-201ENST00000332981 LAMC3Q9Y6N6 1575 aa17.25■□□□□ 0.35
PRKCH-201ENST00000332981 SOX12O15370 315 aa17.25■□□□□ 0.35
PRKCH-201ENST00000332981 TSR2Q969E8 191 aaKnown RBP17.25■□□□□ 0.35
PRKCH-201ENST00000332981 RNF123Q5XPI4 1314 aa17.25■□□□□ 0.35
PRKCH-201ENST00000332981 GPATCH8Q9UKJ3 1502 aaKnown RBP17.25■□□□□ 0.35
PRKCH-201ENST00000332981 TESK2Q96S53 571 aa17.24■□□□□ 0.35
PRKCH-201ENST00000332981 CDCA8Q53HL2 280 aa17.23■□□□□ 0.35
PRKCH-201ENST00000332981 PTPRGP23470 1445 aa17.23■□□□□ 0.35
PRKCH-201ENST00000332981 USP35Q9P2H5 1018 aa17.22■□□□□ 0.35
PRKCH-201ENST00000332981 TCOF1Q13428 1488 aaKnown RBP17.21■□□□□ 0.35
PRKCH-201ENST00000332981 NCLP19338 710 aaKnown RBP17.21■□□□□ 0.35
PRKCH-201ENST00000332981 SRPK2P78362 688 aaKnown RBP17.2■□□□□ 0.34
PRKCH-201ENST00000332981 SMC4Q9NTJ3 1288 aa17.2■□□□□ 0.34
PRKCH-201ENST00000332981 C8orf34Q49A92 452 aa17.2■□□□□ 0.34
PRKCH-201ENST00000332981 BCORL1Q5H9F3 1711 aa17.2■□□□□ 0.34
PRKCH-201ENST00000332981 ERBINQ96RT1 1412 aa17.2■□□□□ 0.34
PRKCH-201ENST00000332981 LRRIQ1Q96JM4 1722 aa17.2■□□□□ 0.34
PRKCH-201ENST00000332981 SPAG9O60271 1321 aaKnown RBP17.19■□□□□ 0.34
PRKCH-201ENST00000332981 TCP11L2Q8N4U5 519 aa17.19■□□□□ 0.34
PRKCH-201ENST00000332981 SLFN5Q08AF3 891 aa17.18■□□□□ 0.34
PRKCH-201ENST00000332981 MTHFSP49914 203 aa17.18■□□□□ 0.34
PRKCH-201ENST00000332981 FBLN1P23142 703 aa17.17■□□□□ 0.34
PRKCH-201ENST00000332981 GLIPR1L2Q4G1C9 344 aa17.17■□□□□ 0.34
PRKCH-201ENST00000332981 EFCAB2Q5VUJ9 269 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms