RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 CAMSAP2Q08AD1 1489 aa12.47□□□□□ -0.41
SS18L1-201ENST00000331758 FRAT1Q92837 279 aaPredicted RBP12.46□□□□□ -0.41
SS18L1-201ENST00000331758 RAPGEF3O95398 923 aa12.45□□□□□ -0.42
SS18L1-201ENST00000331758 VGFO15240 615 aaPredicted RBP12.45□□□□□ -0.42
SS18L1-201ENST00000331758 NBR1Q14596 966 aa12.45□□□□□ -0.42
SS18L1-201ENST00000331758 LMOD2Q6P5Q4 547 aa12.45□□□□□ -0.42
SS18L1-201ENST00000331758 TSHZ2Q9NRE2 1034 aa12.44□□□□□ -0.42
SS18L1-201ENST00000331758 NCOA1Q15788 1441 aa12.44□□□□□ -0.42
SS18L1-201ENST00000331758 NUP153P49790 1475 aaKnown RBP12.44□□□□□ -0.42
SS18L1-201ENST00000331758 MYBBP1AQ9BQG0 1328 aaKnown RBP12.44□□□□□ -0.42
SS18L1-201ENST00000331758 CTTNBP2Q8WZ74 1663 aa12.44□□□□□ -0.42
SS18L1-201ENST00000331758 ADAMTS12P58397 1594 aa12.43□□□□□ -0.42
SS18L1-201ENST00000331758 HDGFL2Q7Z4V5 671 aaPredicted RBP12.43□□□□□ -0.42
SS18L1-201ENST00000331758 U2AF1L5P0DN76 240 aaPredicted RBP12.43□□□□□ -0.42
SS18L1-201ENST00000331758 U2AF1Q01081 240 aaKnown RBP eCLIP12.43□□□□□ -0.423e-7■■■□□ 15.3
SS18L1-201ENST00000331758 CFAP70Q5T0N1 1121 aa12.43□□□□□ -0.42
SS18L1-201ENST00000331758 PLEKHH2Q8IVE3 1493 aa12.42□□□□□ -0.42
SS18L1-201ENST00000331758 ANKRD30BQ9BXX2 1392 aa12.42□□□□□ -0.42
SS18L1-201ENST00000331758 CCDC146Q8IYE0 955 aa12.42□□□□□ -0.42
SS18L1-201ENST00000331758 AKNAQ7Z591 1439 aa12.42□□□□□ -0.42
SS18L1-201ENST00000331758 NUTM2FA1L443 756 aa12.42□□□□□ -0.42
SS18L1-201ENST00000331758 TMEM132EQ6IEE7 984 aa12.41□□□□□ -0.42
SS18L1-201ENST00000331758 GPATCH8Q9UKJ3 1502 aaKnown RBP12.41□□□□□ -0.42
SS18L1-201ENST00000331758 ATP10BO94823 1461 aa12.41□□□□□ -0.42
SS18L1-201ENST00000331758 CCDC141Q6ZP82 1450 aa12.41□□□□□ -0.42
SS18L1-201ENST00000331758 RCAN3Q9UKA8 241 aa12.41□□□□□ -0.42
SS18L1-201ENST00000331758 CNTLNQ9NXG0 1405 aa12.4□□□□□ -0.42
SS18L1-201ENST00000331758 UGGT2Q9NYU1 1516 aa12.39□□□□□ -0.43
SS18L1-201ENST00000331758 MINK1Q8N4C8 1332 aaPredicted RBP12.39□□□□□ -0.43
SS18L1-201ENST00000331758 FTSJ3Q8IY81 847 aaKnown RBP12.39□□□□□ -0.43
SS18L1-201ENST00000331758 EIF4G3O43432 1585 aaKnown RBP12.39□□□□□ -0.43
SS18L1-201ENST00000331758 UPF2Q9HAU5 1272 aaKnown RBP12.38□□□□□ -0.43
SS18L1-201ENST00000331758 TERF2IPQ9NYB0 399 aa12.38□□□□□ -0.43
SS18L1-201ENST00000331758 KIF14Q15058 1648 aa12.38□□□□□ -0.43
SS18L1-201ENST00000331758 RAPGEF6Q8TEU7 1601 aa12.38□□□□□ -0.43
SS18L1-201ENST00000331758 ABCA5Q8WWZ7 1642 aa12.38□□□□□ -0.43
SS18L1-201ENST00000331758 C11orf95C9JLR9 678 aaPredicted RBP12.37□□□□□ -0.43
SS18L1-201ENST00000331758 RGS3P49796 1198 aa12.37□□□□□ -0.43
SS18L1-201ENST00000331758 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.37□□□□□ -0.432e-6■□□□□ 10.1
SS18L1-201ENST00000331758 WDR62O43379 1518 aa12.37□□□□□ -0.43
SS18L1-201ENST00000331758 STAC3Q96MF2 364 aa12.36□□□□□ -0.43
SS18L1-201ENST00000331758 CENPJQ9HC77 1338 aaPredicted RBP12.36□□□□□ -0.43
SS18L1-201ENST00000331758 KIAA0556O60303 1618 aa12.36□□□□□ -0.43
SS18L1-201ENST00000331758 EID1Q9Y6B2 187 aa12.35□□□□□ -0.43
SS18L1-201ENST00000331758 MAPKBP1O60336 1514 aa12.35□□□□□ -0.43
SS18L1-201ENST00000331758 ZBED9Q6R2W3 1325 aa12.35□□□□□ -0.43
SS18L1-201ENST00000331758 EVC2Q86UK5 1308 aa12.35□□□□□ -0.43
SS18L1-201ENST00000331758 PRKCSHP14314 528 aaPredicted RBP12.35□□□□□ -0.43
SS18L1-201ENST00000331758 CCDC184Q52MB2 194 aa12.35□□□□□ -0.43
SS18L1-201ENST00000331758 DISP1Q96F81 1524 aa12.34□□□□□ -0.43
SS18L1-201ENST00000331758 GOLGA2Q08379 1002 aa12.34□□□□□ -0.43
SS18L1-201ENST00000331758 RBM19Q9Y4C8 960 aaKnown RBP12.34□□□□□ -0.43
SS18L1-201ENST00000331758 PNNQ9H307 717 aaKnown RBP12.33□□□□□ -0.44
SS18L1-201ENST00000331758 RRP7AQ9Y3A4 280 aaKnown RBP12.33□□□□□ -0.44
SS18L1-201ENST00000331758 MYH16Q9H6N6 1097 aa12.33□□□□□ -0.44
SS18L1-201ENST00000331758 PAK3O75914 559 aaPredicted RBP12.32□□□□□ -0.44
SS18L1-201ENST00000331758 CFAP43Q8NDM7 1665 aa12.32□□□□□ -0.44
SS18L1-201ENST00000331758 CD109Q6YHK3 1445 aa12.32□□□□□ -0.44
SS18L1-201ENST00000331758 TARBP1Q13395 1621 aaKnown RBP12.32□□□□□ -0.44
SS18L1-201ENST00000331758 NUP160Q12769 1436 aa12.31□□□□□ -0.44
SS18L1-201ENST00000331758 HAP1P54257 671 aaPredicted RBP12.31□□□□□ -0.44
SS18L1-201ENST00000331758 PDE3BQ13370 1112 aa12.31□□□□□ -0.44
SS18L1-201ENST00000331758 ERICH6BQ5W0A0 696 aa12.31□□□□□ -0.44
SS18L1-201ENST00000331758 PBRM1Q86U86 1689 aa12.3□□□□□ -0.44
SS18L1-201ENST00000331758 CGNL1Q0VF96 1302 aa12.3□□□□□ -0.44
SS18L1-201ENST00000331758 APAF1O14727 1248 aa12.3□□□□□ -0.44
SS18L1-201ENST00000331758 RPRD2Q5VT52 1461 aaKnown RBP12.3□□□□□ -0.44
SS18L1-201ENST00000331758 A0A0G2JS52 829 aa12.29□□□□□ -0.44
SS18L1-201ENST00000331758 ADGRL1O94910 1474 aa12.29□□□□□ -0.44
SS18L1-201ENST00000331758 HSP90AA1P07900 732 aaKnown RBP12.29□□□□□ -0.44
SS18L1-201ENST00000331758 CABP2Q9NPB3 220 aa12.29□□□□□ -0.44
SS18L1-201ENST00000331758 NGDNQ8NEJ9 315 aaKnown RBP12.29□□□□□ -0.44
SS18L1-201ENST00000331758 PLIN1O60240 522 aa12.28□□□□□ -0.44
SS18L1-201ENST00000331758 SAMD9Q5K651 1589 aa12.26□□□□□ -0.45
SS18L1-201ENST00000331758 FANCAO15360 1455 aa12.26□□□□□ -0.45
SS18L1-201ENST00000331758 TCOF1Q13428 1488 aaKnown RBP12.26□□□□□ -0.45
SS18L1-201ENST00000331758 SLC12A5Q9H2X9 1139 aa12.26□□□□□ -0.45
SS18L1-201ENST00000331758 CLUAP1Q96AJ1 413 aa12.26□□□□□ -0.45
SS18L1-201ENST00000331758 ERBINQ96RT1 1412 aa12.25□□□□□ -0.45
SS18L1-201ENST00000331758 GGNBP2Q9H3C7 697 aa12.25□□□□□ -0.45
SS18L1-201ENST00000331758 ADAMTS8Q9UP79 889 aa12.25□□□□□ -0.45
SS18L1-201ENST00000331758 MAGI3Q5TCQ9 1506 aa12.24□□□□□ -0.45
SS18L1-201ENST00000331758 PLCH2O75038 1416 aa12.24□□□□□ -0.45
SS18L1-201ENST00000331758 MS4A1P11836 297 aa12.23□□□□□ -0.45
SS18L1-201ENST00000331758 SLC52A1Q9NWF4 448 aa12.23□□□□□ -0.45
SS18L1-201ENST00000331758 BRD4O60885 1362 aaPredicted RBP12.23□□□□□ -0.45
SS18L1-201ENST00000331758 BCL2L13Q9BXK5 485 aa12.23□□□□□ -0.45
SS18L1-201ENST00000331758 PNISRQ8TF01 805 aaKnown RBP12.22□□□□□ -0.45
SS18L1-201ENST00000331758 RTF1Q92541 710 aaKnown RBP12.22□□□□□ -0.45
SS18L1-201ENST00000331758 SYCP2Q9BX26 1530 aa12.22□□□□□ -0.45
SS18L1-201ENST00000331758 PRAM1Q96QH2 718 aa12.22□□□□□ -0.45
SS18L1-201ENST00000331758 CEP170Q5SW79 1584 aa12.22□□□□□ -0.45
SS18L1-201ENST00000331758 EXOC6Q8TAG9 804 aa12.22□□□□□ -0.45
SS18L1-201ENST00000331758 PPP2R1AP30153 589 aa12.21□□□□□ -0.45
SS18L1-201ENST00000331758 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.21□□□□□ -0.46
SS18L1-201ENST00000331758 CDCA7LQ96GN5 454 aa12.21□□□□□ -0.46
SS18L1-201ENST00000331758 ASXL2Q76L83 1435 aa12.21□□□□□ -0.46
SS18L1-201ENST00000331758 TRAPPC8Q9Y2L5 1435 aa12.21□□□□□ -0.46
SS18L1-201ENST00000331758 RRP1P56182 461 aaKnown RBP12.21□□□□□ -0.46
SS18L1-201ENST00000331758 LTV1Q96GA3 475 aaPredicted RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms