RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 AMER1Q5JTC6 1135 aaPredicted RBP10.57□□□□□ -0.72
SMG1-201ENST00000330588 ZCCHC11Q5TAX3 1644 aaKnown RBP10.57□□□□□ -0.72
SMG1-201ENST00000330588 FAM69CQ0P6D2 419 aa10.55□□□□□ -0.72
SMG1-201ENST00000330588 FAM9AQ8IZU1 332 aaPredicted RBP10.55□□□□□ -0.72
SMG1-201ENST00000330588 EFCAB5A4FU69 1503 aa10.54□□□□□ -0.72
SMG1-201ENST00000330588 VGFO15240 615 aaPredicted RBP10.53□□□□□ -0.72
SMG1-201ENST00000330588 WDR7Q9Y4E6 1490 aa10.53□□□□□ -0.72
SMG1-201ENST00000330588 EPRSP07814 1512 aaKnown RBP10.53□□□□□ -0.72
SMG1-201ENST00000330588 MAP3K4Q9Y6R4 1608 aa10.53□□□□□ -0.72
SMG1-201ENST00000330588 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.52□□□□□ -0.72
SMG1-201ENST00000330588 MARVELD3Q96A59 401 aa10.52□□□□□ -0.72
SMG1-201ENST00000330588 ZFP91Q96JP5 570 aaPredicted RBP10.52□□□□□ -0.72
SMG1-201ENST00000330588 G3V3G9 751 aa10.51□□□□□ -0.73
SMG1-201ENST00000330588 SOX12O15370 315 aa10.51□□□□□ -0.73
SMG1-201ENST00000330588 PPRC1Q5VV67 1664 aaKnown RBP10.51□□□□□ -0.73
SMG1-201ENST00000330588 RAPGEF6Q8TEU7 1601 aa10.5□□□□□ -0.73
SMG1-201ENST00000330588 TEX14Q8IWB6 1497 aa10.5□□□□□ -0.73
SMG1-201ENST00000330588 CFAP43Q8NDM7 1665 aa10.49□□□□□ -0.73
SMG1-201ENST00000330588 HOXB3P14651 431 aaPredicted RBP10.49□□□□□ -0.73
SMG1-201ENST00000330588 KDM6BO15054 1643 aa10.49□□□□□ -0.73
SMG1-201ENST00000330588 MS4A4AQ96JQ5 239 aa10.48□□□□□ -0.73
SMG1-201ENST00000330588 MAGI3Q5TCQ9 1506 aa10.47□□□□□ -0.73
SMG1-201ENST00000330588 TTBK1Q5TCY1 1321 aaPredicted RBP10.46□□□□□ -0.73
SMG1-201ENST00000330588 ATP10BO94823 1461 aa10.46□□□□□ -0.73
SMG1-201ENST00000330588 TSPOAP1O95153 1857 aa10.45□□□□□ -0.74
SMG1-201ENST00000330588 EMP3P54852 163 aa10.45□□□□□ -0.74
SMG1-201ENST00000330588 MICALL2Q8IY33 904 aa10.45□□□□□ -0.74
SMG1-201ENST00000330588 POTEB3A0JP26 581 aa10.44□□□□□ -0.74
SMG1-201ENST00000330588 POTEBQ6S5H4 581 aa10.44□□□□□ -0.74
SMG1-201ENST00000330588 NUP153P49790 1475 aaKnown RBP10.44□□□□□ -0.74
SMG1-201ENST00000330588 ABCA9Q8IUA7 1624 aa10.44□□□□□ -0.74
SMG1-201ENST00000330588 PHF8Q9UPP1 1060 aa10.43□□□□□ -0.74
SMG1-201ENST00000330588 PHLDB1Q86UU1 1377 aa10.43□□□□□ -0.74
SMG1-201ENST00000330588 FHOD3Q2V2M9 1422 aa10.42□□□□□ -0.74
SMG1-201ENST00000330588 FMN1Q68DA7 1419 aa10.42□□□□□ -0.74
SMG1-201ENST00000330588 TMEM92Q6UXU6 159 aa10.42□□□□□ -0.74
SMG1-201ENST00000330588 HS3ST6Q96QI5 342 aa10.41□□□□□ -0.74
SMG1-201ENST00000330588 CD109Q6YHK3 1445 aa10.41□□□□□ -0.74
SMG1-201ENST00000330588 SPNS2Q8IVW8 549 aa10.4□□□□□ -0.74
SMG1-201ENST00000330588 TAOK2Q9UL54 1235 aa10.4□□□□□ -0.74
SMG1-201ENST00000330588 HOXB1P14653 301 aaPredicted RBP10.39□□□□□ -0.75
SMG1-201ENST00000330588 ARHGAP35Q9NRY4 1499 aa10.39□□□□□ -0.75
SMG1-201ENST00000330588 HECW1Q76N89 1606 aa10.39□□□□□ -0.75
SMG1-201ENST00000330588 ARAP3Q8WWN8 1544 aa10.39□□□□□ -0.75
SMG1-201ENST00000330588 DOK7Q18PE1 504 aa10.39□□□□□ -0.75
SMG1-201ENST00000330588 P3H3Q8IVL6 736 aa10.39□□□□□ -0.75
SMG1-201ENST00000330588 FBXO22Q8NEZ5 403 aa10.39□□□□□ -0.75
SMG1-201ENST00000330588 BCL11BQ9C0K0 894 aaPredicted RBP10.39□□□□□ -0.75
SMG1-201ENST00000330588 FAM205CA6NFA0 338 aa10.38□□□□□ -0.75
SMG1-201ENST00000330588 NEO1Q92859 1461 aa10.37□□□□□ -0.75
SMG1-201ENST00000330588 UBTFP17480 764 aaKnown RBP10.37□□□□□ -0.75
SMG1-201ENST00000330588 KRTAP3-3Q9BYR6 98 aa10.37□□□□□ -0.75
SMG1-201ENST00000330588 KRTAP3-2Q9BYR7 98 aa10.37□□□□□ -0.75
SMG1-201ENST00000330588 COL17A1Q9UMD9 1497 aaPredicted RBP10.36□□□□□ -0.75
SMG1-201ENST00000330588 NLRP6P59044 892 aa10.36□□□□□ -0.75
SMG1-201ENST00000330588 MMRN1Q13201 1228 aa10.36□□□□□ -0.75
SMG1-201ENST00000330588 PKD2Q13563 968 aa10.36□□□□□ -0.75
SMG1-201ENST00000330588 CFAP74Q9C0B2 1584 aa10.35□□□□□ -0.75
SMG1-201ENST00000330588 ECM2O94769 699 aaPredicted RBP10.35□□□□□ -0.75
SMG1-201ENST00000330588 ZNF710Q8N1W2 664 aa10.34□□□□□ -0.75
SMG1-201ENST00000330588 MFRPQ9BY79 579 aa10.34□□□□□ -0.75
SMG1-201ENST00000330588 PLEKHD1A6NEE1 506 aa10.33□□□□□ -0.76
SMG1-201ENST00000330588 KCNH8Q96L42 1107 aa10.33□□□□□ -0.76
SMG1-201ENST00000330588 STK24Q9Y6E0 443 aa10.33□□□□□ -0.76
SMG1-201ENST00000330588 ZSWIM6Q9HCJ5 1215 aa10.32□□□□□ -0.76
SMG1-201ENST00000330588 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.31□□□□□ -0.76
SMG1-201ENST00000330588 CCDC18Q5T9S5 1454 aa10.31□□□□□ -0.76
SMG1-201ENST00000330588 CASKIN1Q8WXD9 1431 aa10.31□□□□□ -0.76
SMG1-201ENST00000330588 RIMBP2O15034 1052 aa10.31□□□□□ -0.76
SMG1-201ENST00000330588 CDK11AQ9UQ88 783 aaPredicted RBP10.31□□□□□ -0.76
SMG1-201ENST00000330588 CDK13Q14004 1512 aaKnown RBP10.3□□□□□ -0.76
SMG1-201ENST00000330588 STK25O00506 426 aa10.3□□□□□ -0.76
SMG1-201ENST00000330588 RGL2O15211 777 aa10.3□□□□□ -0.76
SMG1-201ENST00000330588 FYCO1Q9BQS8 1478 aa10.29□□□□□ -0.76
SMG1-201ENST00000330588 KIF14Q15058 1648 aa10.28□□□□□ -0.76
SMG1-201ENST00000330588 TTC37Q6PGP7 1564 aa10.28□□□□□ -0.76
SMG1-201ENST00000330588 RANGAP1P46060 587 aaPredicted RBP10.28□□□□□ -0.76
SMG1-201ENST00000330588 GPR153Q6NV75 609 aa10.28□□□□□ -0.76
SMG1-201ENST00000330588 TROQ12816 1431 aaPredicted RBP10.28□□□□□ -0.76
SMG1-201ENST00000330588 PCF11O94913 1555 aaKnown RBP10.28□□□□□ -0.76
SMG1-201ENST00000330588 PLCH2O75038 1416 aa10.27□□□□□ -0.77
SMG1-201ENST00000330588 CLIP1P30622 1438 aa10.27□□□□□ -0.77
SMG1-201ENST00000330588 FRMPD1Q5SYB0 1578 aa10.27□□□□□ -0.77
SMG1-201ENST00000330588 LRRIQ1Q96JM4 1722 aa10.27□□□□□ -0.77
SMG1-201ENST00000330588 ZMYM4Q5VZL5 1548 aa10.27□□□□□ -0.77
SMG1-201ENST00000330588 FANCAO15360 1455 aa10.27□□□□□ -0.77
SMG1-201ENST00000330588 MYO5CQ9NQX4 1742 aa10.26□□□□□ -0.77
SMG1-201ENST00000330588 ERBB3P21860 1342 aa10.26□□□□□ -0.77
SMG1-201ENST00000330588 ARID3CA6NKF2 412 aa10.26□□□□□ -0.77
SMG1-201ENST00000330588 RICTORQ6R327 1708 aa10.26□□□□□ -0.77
SMG1-201ENST00000330588 AKNAQ7Z591 1439 aa10.25□□□□□ -0.77
SMG1-201ENST00000330588 KDM4FA0A1W2PPD8 638 aa10.25□□□□□ -0.77
SMG1-201ENST00000330588 KIF3CO14782 793 aa10.25□□□□□ -0.77
SMG1-201ENST00000330588 DENND4BO75064 1496 aaPredicted RBP10.24□□□□□ -0.77
SMG1-201ENST00000330588 ADGRL1O94910 1474 aa10.24□□□□□ -0.77
SMG1-201ENST00000330588 MAGI2Q86UL8 1455 aa10.24□□□□□ -0.77
SMG1-201ENST00000330588 ARHGEF40Q8TER5 1519 aa10.23□□□□□ -0.77
SMG1-201ENST00000330588 PREX2Q70Z35 1606 aa10.21□□□□□ -0.77
SMG1-201ENST00000330588 VARS2Q5ST30 1063 aaKnown RBP10.21□□□□□ -0.78
SMG1-201ENST00000330588 POGZQ7Z3K3 1410 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms