RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 CHGAP10645 457 aaKnown RBP25.28■■□□□ 1.64
SPSB1-201ENST00000328089 ADGRL2O95490 1459 aa25.27■■□□□ 1.64
SPSB1-201ENST00000328089 ITSN2Q9NZM3 1697 aa25.25■■□□□ 1.63
SPSB1-201ENST00000328089 MBD5Q9P267 1494 aa25.25■■□□□ 1.63
SPSB1-201ENST00000328089 DISP3Q9P2K9 1392 aa25.24■■□□□ 1.63
SPSB1-201ENST00000328089 KTN1Q86UP2 1357 aaKnown RBP25.23■■□□□ 1.63
SPSB1-201ENST00000328089 RALBP1Q15311 655 aa25.23■■□□□ 1.63
SPSB1-201ENST00000328089 NLRP13Q86W25 1043 aa25.23■■□□□ 1.63
SPSB1-201ENST00000328089 RCAN3Q9UKA8 241 aa25.22■■□□□ 1.63
SPSB1-201ENST00000328089 SYCP2Q9BX26 1530 aa25.22■■□□□ 1.63
SPSB1-201ENST00000328089 CCDC141Q6ZP82 1450 aa25.21■■□□□ 1.63
SPSB1-201ENST00000328089 CDC42BPAQ5VT25 1732 aa25.21■■□□□ 1.63
SPSB1-201ENST00000328089 SMG6Q86US8 1419 aaKnown RBP25.2■■□□□ 1.62
SPSB1-201ENST00000328089 PAK3O75914 559 aaPredicted RBP25.19■■□□□ 1.62
SPSB1-201ENST00000328089 ERICH6BQ5W0A0 696 aa25.19■■□□□ 1.62
SPSB1-201ENST00000328089 RALGAPBQ86X10 1494 aa25.19■■□□□ 1.62
SPSB1-201ENST00000328089 TMF1P82094 1093 aa25.19■■□□□ 1.62
SPSB1-201ENST00000328089 EFCAB2Q5VUJ9 269 aa25.19■■□□□ 1.62
SPSB1-201ENST00000328089 ABCA8O94911 1581 aa25.18■■□□□ 1.62
SPSB1-201ENST00000328089 FAM135AQ9P2D6 1515 aa25.18■■□□□ 1.62
SPSB1-201ENST00000328089 KDM5CP41229 1560 aa25.17■■□□□ 1.62
SPSB1-201ENST00000328089 KIF3BO15066 747 aa25.17■■□□□ 1.62
SPSB1-201ENST00000328089 TNNT2P45379 298 aaPredicted RBP25.17■■□□□ 1.62
SPSB1-201ENST00000328089 ERCC6L2Q5T890 1561 aa25.16■■□□□ 1.62
SPSB1-201ENST00000328089 CCDC146Q8IYE0 955 aa25.16■■□□□ 1.62
SPSB1-201ENST00000328089 TESK2Q96S53 571 aa25.15■■□□□ 1.62
SPSB1-201ENST00000328089 FANCIQ9NVI1 1328 aa25.15■■□□□ 1.62
SPSB1-201ENST00000328089 PER1O15534 1290 aaPredicted RBP25.15■■□□□ 1.62
SPSB1-201ENST00000328089 RRP1P56182 461 aaKnown RBP25.15■■□□□ 1.62
SPSB1-201ENST00000328089 RSPH4AQ5TD94 716 aa25.15■■□□□ 1.62
SPSB1-201ENST00000328089 KNSTRNQ9Y448 316 aa25.14■■□□□ 1.62
SPSB1-201ENST00000328089 ADGBQ8N7X0 1667 aa25.14■■□□□ 1.62
SPSB1-201ENST00000328089 SPAG9O60271 1321 aaKnown RBP25.14■■□□□ 1.61
SPSB1-201ENST00000328089 ADAMTS8Q9UP79 889 aa25.14■■□□□ 1.61
SPSB1-201ENST00000328089 ARID4BQ4LE39 1312 aaPredicted RBP25.13■■□□□ 1.61
SPSB1-201ENST00000328089 NUTM2DQ5VT03 806 aaPredicted RBP25.13■■□□□ 1.61
SPSB1-201ENST00000328089 PRAG1Q86YV5 1406 aa25.12■■□□□ 1.61
SPSB1-201ENST00000328089 UHRF1BP1Q6BDS2 1440 aa25.11■■□□□ 1.61
SPSB1-201ENST00000328089 PLA2R1Q13018 1463 aa25.11■■□□□ 1.61
SPSB1-201ENST00000328089 SAMD9LQ8IVG5 1584 aa25.11■■□□□ 1.61
SPSB1-201ENST00000328089 BCL11AQ9H165 835 aa25.1■■□□□ 1.61
SPSB1-201ENST00000328089 BRD4O60885 1362 aaPredicted RBP25.09■■□□□ 1.61
SPSB1-201ENST00000328089 WDR43Q15061 677 aaKnown RBP eCLIP25.08■■□□□ 1.61
SPSB1-201ENST00000328089 A2MP01023 1474 aa25.06■■□□□ 1.6
SPSB1-201ENST00000328089 C20orf194Q5TEA3 1177 aa25.06■■□□□ 1.6
SPSB1-201ENST00000328089 TRAPPC8Q9Y2L5 1435 aa25.06■■□□□ 1.6
SPSB1-201ENST00000328089 ANP32AP39687 249 aaKnown RBP25.06■■□□□ 1.6
SPSB1-201ENST00000328089 CFAP70Q5T0N1 1121 aa25.05■■□□□ 1.6
SPSB1-201ENST00000328089 CROCC2H7BZ55 1655 aa25.05■■□□□ 1.6
SPSB1-201ENST00000328089 NEUROD2Q15784 382 aa25.05■■□□□ 1.6
SPSB1-201ENST00000328089 SHANK2Q9UPX8 1470 aa25.04■■□□□ 1.6
SPSB1-201ENST00000328089 TTC37Q6PGP7 1564 aa25.04■■□□□ 1.6
SPSB1-201ENST00000328089 NOP58Q9Y2X3 529 aaKnown RBP25.03■■□□□ 1.6
SPSB1-201ENST00000328089 CRBNQ96SW2 442 aa25.03■■□□□ 1.6
SPSB1-201ENST00000328089 ARHGEF12Q9NZN5 1544 aa25.03■■□□□ 1.6
SPSB1-201ENST00000328089 ADCY10Q96PN6 1610 aa25.02■■□□□ 1.6
SPSB1-201ENST00000328089 GGT6Q6P531 493 aa25.01■■□□□ 1.59
SPSB1-201ENST00000328089 ERBINQ96RT1 1412 aa25.01■■□□□ 1.59
SPSB1-201ENST00000328089 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25■■□□□ 1.59
SPSB1-201ENST00000328089 LRPPRCP42704 1394 aaKnown RBP24.98■■□□□ 1.59
SPSB1-201ENST00000328089 SAFB2Q14151 953 aaKnown RBP eCLIP24.98■■□□□ 1.59
SPSB1-201ENST00000328089 CDC42BPBQ9Y5S2 1711 aa24.97■■□□□ 1.59
SPSB1-201ENST00000328089 PARD3Q8TEW0 1356 aa24.96■■□□□ 1.59
SPSB1-201ENST00000328089 LAS1LQ9Y4W2 734 aaKnown RBP24.96■■□□□ 1.59
SPSB1-201ENST00000328089 PPP2R1AP30153 589 aa24.96■■□□□ 1.59
SPSB1-201ENST00000328089 ZBTB47Q9UFB7 747 aaPredicted RBP24.95■■□□□ 1.59
SPSB1-201ENST00000328089 TRAK1Q9UPV9 953 aa24.94■■□□□ 1.58
SPSB1-201ENST00000328089 KDM5DQ9BY66 1539 aa24.94■■□□□ 1.58
SPSB1-201ENST00000328089 RNF123Q5XPI4 1314 aa24.94■■□□□ 1.58
SPSB1-201ENST00000328089 SCAPERQ9BY12 1400 aa24.94■■□□□ 1.58
SPSB1-201ENST00000328089 TMEM132EQ6IEE7 984 aa24.93■■□□□ 1.58
SPSB1-201ENST00000328089 APAF1O14727 1248 aa24.91■■□□□ 1.58
SPSB1-201ENST00000328089 ADGRF5Q8IZF2 1346 aa24.9■■□□□ 1.58
SPSB1-201ENST00000328089 RRP7AQ9Y3A4 280 aaKnown RBP24.9■■□□□ 1.58
SPSB1-201ENST00000328089 RGS3P49796 1198 aa24.88■■□□□ 1.57
SPSB1-201ENST00000328089 PDE4AP27815 886 aa24.87■■□□□ 1.57
SPSB1-201ENST00000328089 CHD1O14646 1710 aa24.87■■□□□ 1.57
SPSB1-201ENST00000328089 SLC4A3P48751 1232 aa24.86■■□□□ 1.57
SPSB1-201ENST00000328089 ARHGEF5Q12774 1597 aa24.86■■□□□ 1.57
SPSB1-201ENST00000328089 IPO9Q96P70 1041 aaKnown RBP24.86■■□□□ 1.57
SPSB1-201ENST00000328089 PLCH2O75038 1416 aa24.85■■□□□ 1.57
SPSB1-201ENST00000328089 PREX2Q70Z35 1606 aa24.84■■□□□ 1.57
SPSB1-201ENST00000328089 AMER1Q5JTC6 1135 aaPredicted RBP24.84■■□□□ 1.57
SPSB1-201ENST00000328089 SPINK5Q9NQ38 1064 aaPredicted RBP24.84■■□□□ 1.57
SPSB1-201ENST00000328089 POLR1AO95602 1720 aaPredicted RBP24.83■■□□□ 1.57
SPSB1-201ENST00000328089 DEKP35659 375 aaKnown RBP24.83■■□□□ 1.56
SPSB1-201ENST00000328089 COL17A1Q9UMD9 1497 aaPredicted RBP24.83■■□□□ 1.56
SPSB1-201ENST00000328089 PDE3BQ13370 1112 aa24.82■■□□□ 1.56
SPSB1-201ENST00000328089 PLEKHH1Q9ULM0 1364 aa24.81■■□□□ 1.56
SPSB1-201ENST00000328089 MAGI2Q86UL8 1455 aa24.81■■□□□ 1.56
SPSB1-201ENST00000328089 BCAR3O75815 825 aa24.81■■□□□ 1.56
SPSB1-201ENST00000328089 GOLGA2Q08379 1002 aa24.79■■□□□ 1.56
SPSB1-201ENST00000328089 SLC12A5Q9H2X9 1139 aa24.79■■□□□ 1.56
SPSB1-201ENST00000328089 DMRT2Q9Y5R5 561 aa24.79■■□□□ 1.56
SPSB1-201ENST00000328089 ABCC2Q92887 1545 aa24.79■■□□□ 1.56
SPSB1-201ENST00000328089 GPRASP1Q5JY77 1395 aa24.78■■□□□ 1.56
SPSB1-201ENST00000328089 FRAT1Q92837 279 aaPredicted RBP24.78■■□□□ 1.56
SPSB1-201ENST00000328089 STK26Q9P289 416 aa24.78■■□□□ 1.56
SPSB1-201ENST00000328089 CANXP27824 592 aaKnown RBP24.77■■□□□ 1.56
SPSB1-201ENST00000328089 BCL2L13Q9BXK5 485 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms