RNA–Protein interactions for RNA: ENST00000327968.6

DDX53-201, Transcript of DEAD-box helicase 53, humanhuman

APPRIS P1 BASIC

Gene DDX53, Length 3,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53-201ENST00000327968 PLEKHD1A6NEE1 506 aa12.71□□□□□ -0.38
DDX53-201ENST00000327968 WDR7Q9Y4E6 1490 aa12.7□□□□□ -0.38
DDX53-201ENST00000327968 RGS3P49796 1198 aa12.69□□□□□ -0.38
DDX53-201ENST00000327968 CCDC7Q96M83 1385 aa12.69□□□□□ -0.38
DDX53-201ENST00000327968 PLEKHH2Q8IVE3 1493 aa12.69□□□□□ -0.38
DDX53-201ENST00000327968 DAPK1P53355 1430 aa12.69□□□□□ -0.38
DDX53-201ENST00000327968 CNTLNQ9NXG0 1405 aa12.68□□□□□ -0.38
DDX53-201ENST00000327968 PTPRKQ15262 1439 aa12.68□□□□□ -0.38
DDX53-201ENST00000327968 RIMBP3CA6NJZ7 1639 aa12.68□□□□□ -0.38
DDX53-201ENST00000327968 RIMBP3BA6NNM3 1639 aa12.68□□□□□ -0.38
DDX53-201ENST00000327968 RIMBP3Q9UFD9 1639 aa12.68□□□□□ -0.38
DDX53-201ENST00000327968 SAMD9LQ8IVG5 1584 aa12.68□□□□□ -0.38
DDX53-201ENST00000327968 CDCA7LQ96GN5 454 aa12.67□□□□□ -0.38
DDX53-201ENST00000327968 KIAA1107Q9UPP5 1409 aa12.66□□□□□ -0.38
DDX53-201ENST00000327968 CFAP74Q9C0B2 1584 aa12.66□□□□□ -0.38
DDX53-201ENST00000327968 ABCC5O15440 1437 aa12.65□□□□□ -0.38
DDX53-201ENST00000327968 RCAN3Q9UKA8 241 aa12.65□□□□□ -0.38
DDX53-201ENST00000327968 PLCH2O75038 1416 aa12.64□□□□□ -0.39
DDX53-201ENST00000327968 NAIPQ13075 1403 aa12.64□□□□□ -0.39
DDX53-201ENST00000327968 FRAT1Q92837 279 aaPredicted RBP12.64□□□□□ -0.39
DDX53-201ENST00000327968 PLXNC1O60486 1568 aa12.64□□□□□ -0.39
DDX53-201ENST00000327968 GLI2P10070 1586 aa12.64□□□□□ -0.39
DDX53-201ENST00000327968 CC2D1BQ5T0F9 858 aaKnown RBP12.63□□□□□ -0.39
DDX53-201ENST00000327968 MBD5Q9P267 1494 aa12.63□□□□□ -0.39
DDX53-201ENST00000327968 ABCC1P33527 1531 aa12.62□□□□□ -0.39
DDX53-201ENST00000327968 PPM1GO15355 546 aaPredicted RBP12.62□□□□□ -0.39
DDX53-201ENST00000327968 RRP1P56182 461 aaKnown RBP12.62□□□□□ -0.39
DDX53-201ENST00000327968 NFKBIBQ15653 356 aa12.61□□□□□ -0.39
DDX53-201ENST00000327968 GSE1Q14687 1217 aa12.61□□□□□ -0.39
DDX53-201ENST00000327968 RSPH4AQ5TD94 716 aa12.61□□□□□ -0.39
DDX53-201ENST00000327968 ARID4BQ4LE39 1312 aaPredicted RBP12.6□□□□□ -0.39
DDX53-201ENST00000327968 CCDC141Q6ZP82 1450 aa12.6□□□□□ -0.39
DDX53-201ENST00000327968 ASXL2Q76L83 1435 aa12.6□□□□□ -0.39
DDX53-201ENST00000327968 CRBNQ96SW2 442 aa12.6□□□□□ -0.39
DDX53-201ENST00000327968 CARD11Q9BXL7 1154 aa12.6□□□□□ -0.39
DDX53-201ENST00000327968 SPRYD3Q8NCJ5 442 aa12.59□□□□□ -0.39
DDX53-201ENST00000327968 ARHGAP5Q13017 1502 aa12.59□□□□□ -0.39
DDX53-201ENST00000327968 TCERG1O14776 1098 aaKnown RBP12.59□□□□□ -0.39
DDX53-201ENST00000327968 KDM5DQ9BY66 1539 aa12.59□□□□□ -0.39
DDX53-201ENST00000327968 FRAT2O75474 233 aaPredicted RBP12.58□□□□□ -0.39
DDX53-201ENST00000327968 RGL3Q3MIN7 710 aa12.58□□□□□ -0.39
DDX53-201ENST00000327968 ZNF644Q9H582 1327 aaPredicted RBP12.58□□□□□ -0.4
DDX53-201ENST00000327968 BACH2Q9BYV9 841 aa12.58□□□□□ -0.4
DDX53-201ENST00000327968 CFDP1Q9UEE9 299 aaPredicted RBP12.58□□□□□ -0.4
DDX53-201ENST00000327968 SLKQ9H2G2 1235 aaPredicted RBP12.57□□□□□ -0.4
DDX53-201ENST00000327968 MAP3K4Q9Y6R4 1608 aa12.57□□□□□ -0.4
DDX53-201ENST00000327968 PNISRQ8TF01 805 aaKnown RBP12.56□□□□□ -0.4
DDX53-201ENST00000327968 NCOA1Q15788 1441 aa12.56□□□□□ -0.4
DDX53-201ENST00000327968 C20orf194Q5TEA3 1177 aa12.55□□□□□ -0.4
DDX53-201ENST00000327968 SYCP2Q9BX26 1530 aa12.55□□□□□ -0.4
DDX53-201ENST00000327968 ST20-MTHFSA0A0A6YYL1 179 aa12.55□□□□□ -0.4
DDX53-201ENST00000327968 RTEL1-TNFRSF6BF6WH68 1400 aa12.54□□□□□ -0.4
DDX53-201ENST00000327968 C9orf84Q5VXU9 1444 aa12.54□□□□□ -0.4
DDX53-201ENST00000327968 SMG6Q86US8 1419 aaKnown RBP12.54□□□□□ -0.4
DDX53-201ENST00000327968 INO80Q9ULG1 1556 aaPredicted RBP12.54□□□□□ -0.4
DDX53-201ENST00000327968 UNC13BO14795 1591 aa12.53□□□□□ -0.4
DDX53-201ENST00000327968 KDM6BO15054 1643 aa12.53□□□□□ -0.4
DDX53-201ENST00000327968 ANKRD30AQ9BXX3 1397 aa12.53□□□□□ -0.4
DDX53-201ENST00000327968 GZF1Q9H116 711 aaPredicted RBP12.52□□□□□ -0.4
DDX53-201ENST00000327968 DCAF11Q8TEB1 546 aa12.52□□□□□ -0.4
DDX53-201ENST00000327968 PKD2Q13563 968 aa12.52□□□□□ -0.41
DDX53-201ENST00000327968 DDRGK1Q96HY6 314 aa12.51□□□□□ -0.41
DDX53-201ENST00000327968 NEO1Q92859 1461 aa12.51□□□□□ -0.41
DDX53-201ENST00000327968 USP47Q96K76 1375 aa12.51□□□□□ -0.41
DDX53-201ENST00000327968 ARHGEF12Q9NZN5 1544 aa12.51□□□□□ -0.41
DDX53-201ENST00000327968 BCORL1Q5H9F3 1711 aa12.5□□□□□ -0.41
DDX53-201ENST00000327968 EIF2AK4Q9P2K8 1649 aaKnown RBP12.5□□□□□ -0.41
DDX53-201ENST00000327968 KDM5CP41229 1560 aa12.5□□□□□ -0.41
DDX53-201ENST00000327968 MAGI2Q86UL8 1455 aa12.5□□□□□ -0.41
DDX53-201ENST00000327968 DUOX2Q9NRD8 1548 aa12.5□□□□□ -0.41
DDX53-201ENST00000327968 ZFYVE16Q7Z3T8 1539 aa12.49□□□□□ -0.41
DDX53-201ENST00000327968 DIP2BQ9P265 1576 aa12.49□□□□□ -0.41
DDX53-201ENST00000327968 USP35Q9P2H5 1018 aa12.49□□□□□ -0.41
DDX53-201ENST00000327968 FANCAO15360 1455 aa12.49□□□□□ -0.41
DDX53-201ENST00000327968 EFCAB2Q5VUJ9 269 aa12.49□□□□□ -0.41
DDX53-201ENST00000327968 ERBINQ96RT1 1412 aa12.48□□□□□ -0.41
DDX53-201ENST00000327968 NPM1P06748 294 aaKnown RBP eCLIP12.48□□□□□ -0.41
DDX53-201ENST00000327968 NAP1L5Q96NT1 182 aaPredicted RBP12.47□□□□□ -0.41
DDX53-201ENST00000327968 DEPDC5O75140 1603 aa12.47□□□□□ -0.41
DDX53-201ENST00000327968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.47□□□□□ -0.41
DDX53-201ENST00000327968 DENND4BO75064 1496 aaPredicted RBP12.46□□□□□ -0.41
DDX53-201ENST00000327968 CANXP27824 592 aaKnown RBP12.46□□□□□ -0.42
DDX53-201ENST00000327968 IQGAP3Q86VI3 1631 aa12.45□□□□□ -0.42
DDX53-201ENST00000327968 POGKQ9P215 609 aa12.45□□□□□ -0.42
DDX53-201ENST00000327968 CCDC146Q8IYE0 955 aa12.45□□□□□ -0.42
DDX53-201ENST00000327968 PPRC1Q5VV67 1664 aaKnown RBP12.44□□□□□ -0.42
DDX53-201ENST00000327968 ANKRD50Q9ULJ7 1429 aa12.44□□□□□ -0.42
DDX53-201ENST00000327968 PZPP20742 1482 aa12.44□□□□□ -0.42
DDX53-201ENST00000327968 NEUROD2Q15784 382 aa12.44□□□□□ -0.42
DDX53-201ENST00000327968 ATP7AQ04656 1500 aa12.44□□□□□ -0.42
DDX53-201ENST00000327968 ADGRL1O94910 1474 aa12.43□□□□□ -0.42
DDX53-201ENST00000327968 ZNF518AQ6AHZ1 1483 aa12.43□□□□□ -0.42
DDX53-201ENST00000327968 CD109Q6YHK3 1445 aa12.43□□□□□ -0.42
DDX53-201ENST00000327968 RICTORQ6R327 1708 aa12.42□□□□□ -0.42
DDX53-201ENST00000327968 ZMYM4Q5VZL5 1548 aa12.42□□□□□ -0.42
DDX53-201ENST00000327968 MYBBP1AQ9BQG0 1328 aaKnown RBP12.42□□□□□ -0.42
DDX53-201ENST00000327968 MLH3Q9UHC1 1453 aa12.42□□□□□ -0.42
DDX53-201ENST00000327968 KIF15Q9NS87 1388 aa12.42□□□□□ -0.42
DDX53-201ENST00000327968 POGZQ7Z3K3 1410 aa12.41□□□□□ -0.42
DDX53-201ENST00000327968 TSPY4P0CV99 314 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms