RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ARHGEF12Q9NZN5 1544 aa16.76■□□□□ 0.27
CCDC60-201ENST00000327554 ZMYM4Q5VZL5 1548 aa16.75■□□□□ 0.27
CCDC60-201ENST00000327554 ST20-MTHFSA0A0A6YYL1 179 aa16.75■□□□□ 0.27
CCDC60-201ENST00000327554 FAM161AQ3B820 660 aa16.75■□□□□ 0.27
CCDC60-201ENST00000327554 INSRP06213 1382 aa16.75■□□□□ 0.27
CCDC60-201ENST00000327554 C20orf194Q5TEA3 1177 aa16.75■□□□□ 0.27
CCDC60-201ENST00000327554 URB2Q14146 1524 aaKnown RBP16.74■□□□□ 0.27
CCDC60-201ENST00000327554 CENPQQ7L2Z9 268 aaPredicted RBP16.73■□□□□ 0.27
CCDC60-201ENST00000327554 VIRMAQ69YN4 1812 aaKnown RBP16.73■□□□□ 0.27
CCDC60-201ENST00000327554 PKD2Q13563 968 aa16.73■□□□□ 0.27
CCDC60-201ENST00000327554 IQGAP2Q13576 1575 aa16.73■□□□□ 0.27
CCDC60-201ENST00000327554 ARID3CA6NKF2 412 aa16.72■□□□□ 0.27
CCDC60-201ENST00000327554 PLEKHH2Q8IVE3 1493 aa16.72■□□□□ 0.27
CCDC60-201ENST00000327554 CROCC2H7BZ55 1655 aa16.72■□□□□ 0.27
CCDC60-201ENST00000327554 KIAA0586Q9BVV6 1533 aa16.71■□□□□ 0.27
CCDC60-201ENST00000327554 ZNF608Q9ULD9 1512 aaPredicted RBP16.7■□□□□ 0.26
CCDC60-201ENST00000327554 ADGRL2O95490 1459 aa16.7■□□□□ 0.26
CCDC60-201ENST00000327554 PER1O15534 1290 aaPredicted RBP16.69■□□□□ 0.26
CCDC60-201ENST00000327554 CAMSAP2Q08AD1 1489 aa16.69■□□□□ 0.26
CCDC60-201ENST00000327554 CEP170Q5SW79 1584 aa16.66■□□□□ 0.26
CCDC60-201ENST00000327554 RRAGDQ9NQL2 400 aaPredicted RBP16.65■□□□□ 0.26
CCDC60-201ENST00000327554 ITSN2Q9NZM3 1697 aa16.65■□□□□ 0.26
CCDC60-201ENST00000327554 POGKQ9P215 609 aa16.64■□□□□ 0.25
CCDC60-201ENST00000327554 TRPM1Q7Z4N2 1603 aa16.64■□□□□ 0.25
CCDC60-201ENST00000327554 PBRM1Q86U86 1689 aa16.62■□□□□ 0.25
CCDC60-201ENST00000327554 KDM2AQ9Y2K7 1162 aa16.62■□□□□ 0.25
CCDC60-201ENST00000327554 NUP153P49790 1475 aaKnown RBP16.62■□□□□ 0.25
CCDC60-201ENST00000327554 USP19O94966 1318 aa16.62■□□□□ 0.25
CCDC60-201ENST00000327554 RGS3P49796 1198 aa16.61■□□□□ 0.25
CCDC60-201ENST00000327554 KDM5DQ9BY66 1539 aa16.6■□□□□ 0.25
CCDC60-201ENST00000327554 ANKRD50Q9ULJ7 1429 aa16.6■□□□□ 0.25
CCDC60-201ENST00000327554 DUSP27Q5VZP5 1158 aa16.59■□□□□ 0.25
CCDC60-201ENST00000327554 TARBP1Q13395 1621 aaKnown RBP16.59■□□□□ 0.25
CCDC60-201ENST00000327554 COL17A1Q9UMD9 1497 aaPredicted RBP16.59■□□□□ 0.25
CCDC60-201ENST00000327554 CC2D1BQ5T0F9 858 aaKnown RBP16.59■□□□□ 0.25
CCDC60-201ENST00000327554 ANKRD30AQ9BXX3 1397 aa16.59■□□□□ 0.25
CCDC60-201ENST00000327554 PLEKHH1Q9ULM0 1364 aa16.58■□□□□ 0.24
CCDC60-201ENST00000327554 RAPGEF6Q8TEU7 1601 aa16.58■□□□□ 0.24
CCDC60-201ENST00000327554 ADAMTS12P58397 1594 aa16.57■□□□□ 0.24
CCDC60-201ENST00000327554 PKNOX2Q96KN3 472 aa16.57■□□□□ 0.24
CCDC60-201ENST00000327554 NUP155O75694 1391 aa16.57■□□□□ 0.24
CCDC60-201ENST00000327554 GPATCH8Q9UKJ3 1502 aaKnown RBP16.56■□□□□ 0.24
CCDC60-201ENST00000327554 L1TD1Q5T7N2 865 aaKnown RBP16.56■□□□□ 0.24
CCDC60-201ENST00000327554 CFDP1Q9UEE9 299 aaPredicted RBP16.56■□□□□ 0.24
CCDC60-201ENST00000327554 KIAA0556O60303 1618 aa16.55■□□□□ 0.24
CCDC60-201ENST00000327554 PRAG1Q86YV5 1406 aa16.55■□□□□ 0.24
CCDC60-201ENST00000327554 ZNF521Q96K83 1311 aa16.55■□□□□ 0.24
CCDC60-201ENST00000327554 ADAMTS8Q9UP79 889 aa16.55■□□□□ 0.24
CCDC60-201ENST00000327554 LAMC1P11047 1609 aa16.54■□□□□ 0.24
CCDC60-201ENST00000327554 ADCY10Q96PN6 1610 aa16.54■□□□□ 0.24
CCDC60-201ENST00000327554 DISP3Q9P2K9 1392 aa16.54■□□□□ 0.24
CCDC60-201ENST00000327554 NLRP1Q9C000 1473 aa16.54■□□□□ 0.24
CCDC60-201ENST00000327554 TROQ12816 1431 aaPredicted RBP16.54■□□□□ 0.24
CCDC60-201ENST00000327554 PRG4Q92954 1404 aaPredicted RBP16.54■□□□□ 0.24
CCDC60-201ENST00000327554 EIF3AQ14152 1382 aaKnown RBP16.54■□□□□ 0.24
CCDC60-201ENST00000327554 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.54■□□□□ 0.24
CCDC60-201ENST00000327554 CDC42BPAQ5VT25 1732 aa16.53■□□□□ 0.24
CCDC60-201ENST00000327554 EIF4G3O43432 1585 aaKnown RBP16.53■□□□□ 0.24
CCDC60-201ENST00000327554 CLASP1Q7Z460 1538 aa16.53■□□□□ 0.24
CCDC60-201ENST00000327554 PRDM15P57071 1507 aaPredicted RBP16.52■□□□□ 0.24
CCDC60-201ENST00000327554 DISP1Q96F81 1524 aa16.52■□□□□ 0.24
CCDC60-201ENST00000327554 PTPRGP23470 1445 aa16.52■□□□□ 0.24
CCDC60-201ENST00000327554 GPRASP1Q5JY77 1395 aa16.52■□□□□ 0.23
CCDC60-201ENST00000327554 PANK3Q9H999 370 aa16.52■□□□□ 0.23
CCDC60-201ENST00000327554 SEC24BO95487 1268 aa16.51■□□□□ 0.23
CCDC60-201ENST00000327554 ANTXR1Q9H6X2 564 aa16.51■□□□□ 0.23
CCDC60-201ENST00000327554 TESK2Q96S53 571 aa16.51■□□□□ 0.23
CCDC60-201ENST00000327554 GOLGA2Q08379 1002 aa16.5■□□□□ 0.23
CCDC60-201ENST00000327554 NBPF1Q3BBV0 1214 aa16.5■□□□□ 0.23
CCDC60-201ENST00000327554 BECN1Q14457 450 aa16.49■□□□□ 0.23
CCDC60-201ENST00000327554 SLKQ9H2G2 1235 aaPredicted RBP16.49■□□□□ 0.23
CCDC60-201ENST00000327554 ZNF777Q9ULD5 760 aaPredicted RBP16.49■□□□□ 0.23
CCDC60-201ENST00000327554 SHANK2Q9UPX8 1470 aa16.49■□□□□ 0.23
CCDC60-201ENST00000327554 GLIPR1L2Q4G1C9 344 aa16.48■□□□□ 0.23
CCDC60-201ENST00000327554 SLFN5Q08AF3 891 aa16.48■□□□□ 0.23
CCDC60-201ENST00000327554 IGHDP01880 384 aa16.47■□□□□ 0.23
CCDC60-201ENST00000327554 XRCC6P12956 609 aaKnown RBP eCLIP16.47■□□□□ 0.23
CCDC60-201ENST00000327554 ERBINQ96RT1 1412 aa16.47■□□□□ 0.23
CCDC60-201ENST00000327554 TRMT2AQ8IZ69 625 aaKnown RBP16.47■□□□□ 0.23
CCDC60-201ENST00000327554 FSD2A1L4K1 749 aa16.46■□□□□ 0.23
CCDC60-201ENST00000327554 C9orf84Q5VXU9 1444 aa16.46■□□□□ 0.23
CCDC60-201ENST00000327554 CLCN1P35523 988 aa16.46■□□□□ 0.23
CCDC60-201ENST00000327554 MYO5CQ9NQX4 1742 aa16.45■□□□□ 0.22
CCDC60-201ENST00000327554 ABCC10Q5T3U5 1492 aa16.44■□□□□ 0.22
CCDC60-201ENST00000327554 NAP1L5Q96NT1 182 aaPredicted RBP16.44■□□□□ 0.22
CCDC60-201ENST00000327554 PNNQ9H307 717 aaKnown RBP16.44■□□□□ 0.22
CCDC60-201ENST00000327554 NKTRP30414 1462 aaKnown RBP16.44■□□□□ 0.22
CCDC60-201ENST00000327554 PPP2R1AP30153 589 aa16.43■□□□□ 0.22
CCDC60-201ENST00000327554 WDR43Q15061 677 aaKnown RBP eCLIP16.43■□□□□ 0.22
CCDC60-201ENST00000327554 MAPK8IP3Q9UPT6 1336 aa16.43■□□□□ 0.22
CCDC60-201ENST00000327554 A2MP01023 1474 aa16.43■□□□□ 0.22
CCDC60-201ENST00000327554 GOLGA6L3A6NEY3 463 aa16.42■□□□□ 0.22
CCDC60-201ENST00000327554 BCAR3O75815 825 aa16.42■□□□□ 0.22
CCDC60-201ENST00000327554 FAM135AQ9P2D6 1515 aa16.42■□□□□ 0.22
CCDC60-201ENST00000327554 MAGI2Q86UL8 1455 aa16.42■□□□□ 0.22
CCDC60-201ENST00000327554 PANK2Q9BZ23 570 aa16.42■□□□□ 0.22
CCDC60-201ENST00000327554 ZMYND15Q9H091 742 aa16.42■□□□□ 0.22
CCDC60-201ENST00000327554 SPINK5Q9NQ38 1064 aaPredicted RBP16.42■□□□□ 0.22
CCDC60-201ENST00000327554 VSIG10Q8N0Z9 540 aa16.41■□□□□ 0.22
CCDC60-201ENST00000327554 RRP9O43818 475 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms