RNA–Protein interactions for RNA: ENST00000326654.6

ERGIC1-201, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best) BASIC

Gene ERGIC1, Length 3,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-201ENST00000326654 TTC37Q6PGP7 1564 aa11.31□□□□□ -0.6
ERGIC1-201ENST00000326654 NBR1Q14596 966 aa11.31□□□□□ -0.6
ERGIC1-201ENST00000326654 ANP32CO43423 234 aa11.3□□□□□ -0.6
ERGIC1-201ENST00000326654 IRX6P78412 446 aaPredicted RBP11.29□□□□□ -0.6
ERGIC1-201ENST00000326654 SHANK2Q9UPX8 1470 aa11.29□□□□□ -0.6
ERGIC1-201ENST00000326654 MYO5CQ9NQX4 1742 aa11.29□□□□□ -0.6
ERGIC1-201ENST00000326654 ZNF518AQ6AHZ1 1483 aa11.28□□□□□ -0.6
ERGIC1-201ENST00000326654 ANO8Q9HCE9 1232 aaPredicted RBP11.27□□□□□ -0.6
ERGIC1-201ENST00000326654 MBD5Q9P267 1494 aa11.27□□□□□ -0.6
ERGIC1-201ENST00000326654 TEX14Q8IWB6 1497 aa11.27□□□□□ -0.61
ERGIC1-201ENST00000326654 DHX29Q7Z478 1369 aaKnown RBP11.26□□□□□ -0.61
ERGIC1-201ENST00000326654 DEKP35659 375 aaKnown RBP11.26□□□□□ -0.61
ERGIC1-201ENST00000326654 PREX2Q70Z35 1606 aa11.25□□□□□ -0.61
ERGIC1-201ENST00000326654 SAMD9LQ8IVG5 1584 aa11.25□□□□□ -0.61
ERGIC1-201ENST00000326654 RIMBP3CA6NJZ7 1639 aa11.25□□□□□ -0.61
ERGIC1-201ENST00000326654 RIMBP3BA6NNM3 1639 aa11.25□□□□□ -0.61
ERGIC1-201ENST00000326654 RIMBP3Q9UFD9 1639 aa11.25□□□□□ -0.61
ERGIC1-201ENST00000326654 CDC42BPAQ5VT25 1732 aa11.25□□□□□ -0.61
ERGIC1-201ENST00000326654 ADGRL2O95490 1459 aa11.25□□□□□ -0.61
ERGIC1-201ENST00000326654 HSPA5P11021 654 aaKnown RBP11.25□□□□□ -0.61
ERGIC1-201ENST00000326654 DUOX2Q9NRD8 1548 aa11.24□□□□□ -0.61
ERGIC1-201ENST00000326654 CCDC136Q96JN2 1154 aa11.24□□□□□ -0.61
ERGIC1-201ENST00000326654 ANKRD30BQ9BXX2 1392 aa11.24□□□□□ -0.61
ERGIC1-201ENST00000326654 RTEL1-TNFRSF6BF6WH68 1400 aa11.24□□□□□ -0.61
ERGIC1-201ENST00000326654 ARHGEF5Q12774 1597 aa11.23□□□□□ -0.61
ERGIC1-201ENST00000326654 ROCK2O75116 1388 aaKnown RBP11.22□□□□□ -0.61
ERGIC1-201ENST00000326654 ERBINQ96RT1 1412 aa11.22□□□□□ -0.61
ERGIC1-201ENST00000326654 MSH5O43196 834 aa11.22□□□□□ -0.61
ERGIC1-201ENST00000326654 PIAS4Q8N2W9 510 aaPredicted RBP11.21□□□□□ -0.61
ERGIC1-201ENST00000326654 A2MP01023 1474 aa11.21□□□□□ -0.61
ERGIC1-201ENST00000326654 NEO1Q92859 1461 aa11.21□□□□□ -0.61
ERGIC1-201ENST00000326654 MAPKBP1O60336 1514 aa11.21□□□□□ -0.61
ERGIC1-201ENST00000326654 NUTM2DQ5VT03 806 aaPredicted RBP11.21□□□□□ -0.61
ERGIC1-201ENST00000326654 ABCC1P33527 1531 aa11.2□□□□□ -0.62
ERGIC1-201ENST00000326654 KCNA4P22459 653 aa11.2□□□□□ -0.62
ERGIC1-201ENST00000326654 ARHGEF12Q9NZN5 1544 aa11.2□□□□□ -0.62
ERGIC1-201ENST00000326654 NCBP3Q53F19 620 aaKnown RBP11.19□□□□□ -0.62
ERGIC1-201ENST00000326654 HDGFP51858 240 aaKnown RBP11.19□□□□□ -0.62
ERGIC1-201ENST00000326654 ATP7AQ04656 1500 aa11.19□□□□□ -0.62
ERGIC1-201ENST00000326654 POGZQ7Z3K3 1410 aa11.19□□□□□ -0.62
ERGIC1-201ENST00000326654 CDC42BPBQ9Y5S2 1711 aa11.18□□□□□ -0.62
ERGIC1-201ENST00000326654 RTL5Q5HYW3 569 aaPredicted RBP11.18□□□□□ -0.62
ERGIC1-201ENST00000326654 ARAP3Q8WWN8 1544 aa11.17□□□□□ -0.62
ERGIC1-201ENST00000326654 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.17□□□□□ -0.62
ERGIC1-201ENST00000326654 GCC2Q8IWJ2 1684 aa11.17□□□□□ -0.62
ERGIC1-201ENST00000326654 ADGBQ8N7X0 1667 aa11.17□□□□□ -0.62
ERGIC1-201ENST00000326654 ABCA9Q8IUA7 1624 aa11.16□□□□□ -0.62
ERGIC1-201ENST00000326654 DNAJC5Q9H3Z4 198 aa11.16□□□□□ -0.62
ERGIC1-201ENST00000326654 NBPF8Q3BBV2 869 aa11.16□□□□□ -0.62
ERGIC1-201ENST00000326654 CFAP74Q9C0B2 1584 aa11.16□□□□□ -0.62
ERGIC1-201ENST00000326654 FAM135AQ9P2D6 1515 aa11.16□□□□□ -0.62
ERGIC1-201ENST00000326654 PZPP20742 1482 aa11.15□□□□□ -0.62
ERGIC1-201ENST00000326654 KDM6BO15054 1643 aa11.15□□□□□ -0.62
ERGIC1-201ENST00000326654 VGFO15240 615 aaPredicted RBP11.15□□□□□ -0.62
ERGIC1-201ENST00000326654 RPRD2Q5VT52 1461 aaKnown RBP11.15□□□□□ -0.62
ERGIC1-201ENST00000326654 CDCA8Q53HL2 280 aa11.15□□□□□ -0.63
ERGIC1-201ENST00000326654 EIF5BO60841 1220 aaKnown RBP11.14□□□□□ -0.63
ERGIC1-201ENST00000326654 STAC3Q96MF2 364 aa11.14□□□□□ -0.63
ERGIC1-201ENST00000326654 TMF1P82094 1093 aa11.14□□□□□ -0.63
ERGIC1-201ENST00000326654 POGKQ9P215 609 aa11.14□□□□□ -0.63
ERGIC1-201ENST00000326654 STK26Q9P289 416 aa11.14□□□□□ -0.63
ERGIC1-201ENST00000326654 TSPOAP1O95153 1857 aa11.14□□□□□ -0.63
ERGIC1-201ENST00000326654 ST20-MTHFSA0A0A6YYL1 179 aa11.14□□□□□ -0.63
ERGIC1-201ENST00000326654 SLC52A1Q9NWF4 448 aa11.14□□□□□ -0.63
ERGIC1-201ENST00000326654 SALL2Q9Y467 1007 aaPredicted RBP11.13□□□□□ -0.63
ERGIC1-201ENST00000326654 USP47Q96K76 1375 aa11.12□□□□□ -0.63
ERGIC1-201ENST00000326654 TMC1Q8TDI8 760 aa11.12□□□□□ -0.63
ERGIC1-201ENST00000326654 SAFB2Q14151 953 aaKnown RBP eCLIP11.12□□□□□ -0.63
ERGIC1-201ENST00000326654 YEATS2Q9ULM3 1422 aa11.11□□□□□ -0.63
ERGIC1-201ENST00000326654 FBXO31Q5XUX0 539 aaPredicted RBP11.11□□□□□ -0.63
ERGIC1-201ENST00000326654 TRAK1Q9UPV9 953 aa11.1□□□□□ -0.63
ERGIC1-201ENST00000326654 MLH3Q9UHC1 1453 aa11.1□□□□□ -0.63
ERGIC1-201ENST00000326654 EID1Q9Y6B2 187 aa11.1□□□□□ -0.63
ERGIC1-201ENST00000326654 NBPF1Q3BBV0 1214 aa11.09□□□□□ -0.63
ERGIC1-201ENST00000326654 ATP10AO60312 1499 aa11.09□□□□□ -0.63
ERGIC1-201ENST00000326654 ZFYVE16Q7Z3T8 1539 aa11.09□□□□□ -0.63
ERGIC1-201ENST00000326654 CFAP70Q5T0N1 1121 aa11.09□□□□□ -0.63
ERGIC1-201ENST00000326654 EIF3AQ14152 1382 aaKnown RBP11.08□□□□□ -0.64
ERGIC1-201ENST00000326654 IDI1Q13907 227 aa11.08□□□□□ -0.64
ERGIC1-201ENST00000326654 HNRNPUQ00839 825 aaKnown RBP eCLIP11.08□□□□□ -0.64
ERGIC1-201ENST00000326654 MAST1Q9Y2H9 1570 aa11.08□□□□□ -0.64
ERGIC1-201ENST00000326654 CROCC2H7BZ55 1655 aa11.07□□□□□ -0.64
ERGIC1-201ENST00000326654 AMER1Q5JTC6 1135 aaPredicted RBP11.06□□□□□ -0.64
ERGIC1-201ENST00000326654 PLXNC1O60486 1568 aa11.06□□□□□ -0.64
ERGIC1-201ENST00000326654 HECW2Q9P2P5 1572 aa11.06□□□□□ -0.64
ERGIC1-201ENST00000326654 CEBPAP49715 358 aaPredicted RBP11.06□□□□□ -0.64
ERGIC1-201ENST00000326654 KNSTRNQ9Y448 316 aa11.06□□□□□ -0.64
ERGIC1-201ENST00000326654 MRS2Q9HD23 443 aa11.05□□□□□ -0.64
ERGIC1-201ENST00000326654 SRPK2P78362 688 aaKnown RBP11.05□□□□□ -0.64
ERGIC1-201ENST00000326654 TMEM132EQ6IEE7 984 aa11.05□□□□□ -0.64
ERGIC1-201ENST00000326654 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.05□□□□□ -0.64
ERGIC1-201ENST00000326654 FAM9BQ8IZU0 186 aa11.05□□□□□ -0.64
ERGIC1-201ENST00000326654 RPGRIP1LQ68CZ1 1315 aa11.04□□□□□ -0.64
ERGIC1-201ENST00000326654 C14orf37Q86TY3 774 aa11.04□□□□□ -0.64
ERGIC1-201ENST00000326654 MAGI2Q86UL8 1455 aa11.04□□□□□ -0.64
ERGIC1-201ENST00000326654 DIP2BQ9P265 1576 aa11.03□□□□□ -0.64
ERGIC1-201ENST00000326654 B4GALNT3Q6L9W6 998 aa11.02□□□□□ -0.65
ERGIC1-201ENST00000326654 NOP58Q9Y2X3 529 aaKnown RBP11.02□□□□□ -0.65
ERGIC1-201ENST00000326654 GLI2P10070 1586 aa11.02□□□□□ -0.65
ERGIC1-201ENST00000326654 ADGRF5Q8IZF2 1346 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms