RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 RAPGEF6Q8TEU7 1601 aa16.66■□□□□ 0.26
CCDC149-201ENST00000324309 HIRIP3Q9BW71 556 aaPredicted RBP16.66■□□□□ 0.26
CCDC149-201ENST00000324309 CSB-PGBD3P0DP91 1061 aa16.66■□□□□ 0.26
CCDC149-201ENST00000324309 LMOD3Q0VAK6 560 aa16.64■□□□□ 0.25
CCDC149-201ENST00000324309 CC2D1BQ5T0F9 858 aaKnown RBP16.64■□□□□ 0.25
CCDC149-201ENST00000324309 ZNF644Q9H582 1327 aaPredicted RBP16.64■□□□□ 0.25
CCDC149-201ENST00000324309 RTL5Q5HYW3 569 aaPredicted RBP16.64■□□□□ 0.25
CCDC149-201ENST00000324309 CDK13Q14004 1512 aaKnown RBP16.64■□□□□ 0.25
CCDC149-201ENST00000324309 NUP160Q12769 1436 aa16.64■□□□□ 0.25
CCDC149-201ENST00000324309 SALL2Q9Y467 1007 aaPredicted RBP16.62■□□□□ 0.25
CCDC149-201ENST00000324309 CGNL1Q0VF96 1302 aa16.61■□□□□ 0.25
CCDC149-201ENST00000324309 PBRM1Q86U86 1689 aa16.61■□□□□ 0.25
CCDC149-201ENST00000324309 ATF3P18847 181 aa16.61■□□□□ 0.25
CCDC149-201ENST00000324309 CAMSAP2Q08AD1 1489 aa16.6■□□□□ 0.25
CCDC149-201ENST00000324309 KIAA0556O60303 1618 aa16.59■□□□□ 0.25
CCDC149-201ENST00000324309 KIAA1107Q9UPP5 1409 aa16.59■□□□□ 0.25
CCDC149-201ENST00000324309 HDAC5Q9UQL6 1122 aa16.59■□□□□ 0.25
CCDC149-201ENST00000324309 WDR7Q9Y4E6 1490 aa16.59■□□□□ 0.25
CCDC149-201ENST00000324309 ARHGEF11O15085 1522 aa16.59■□□□□ 0.25
CCDC149-201ENST00000324309 FANCAO15360 1455 aa16.59■□□□□ 0.25
CCDC149-201ENST00000324309 ANKRD30BQ9BXX2 1392 aa16.58■□□□□ 0.24
CCDC149-201ENST00000324309 TRAK1Q9UPV9 953 aa16.58■□□□□ 0.24
CCDC149-201ENST00000324309 ITSN2Q9NZM3 1697 aa16.58■□□□□ 0.24
CCDC149-201ENST00000324309 FTSJ3Q8IY81 847 aaKnown RBP16.58■□□□□ 0.24
CCDC149-201ENST00000324309 ANP32AP39687 249 aaKnown RBP16.57■□□□□ 0.24
CCDC149-201ENST00000324309 ANKLE2Q86XL3 938 aa16.57■□□□□ 0.24
CCDC149-201ENST00000324309 CCDC136Q96JN2 1154 aa16.56■□□□□ 0.24
CCDC149-201ENST00000324309 ABCA5Q8WWZ7 1642 aa16.56■□□□□ 0.24
CCDC149-201ENST00000324309 COG3Q96JB2 828 aa16.56■□□□□ 0.24
CCDC149-201ENST00000324309 CENPJQ9HC77 1338 aaPredicted RBP16.56■□□□□ 0.24
CCDC149-201ENST00000324309 NPHP1O15259 732 aa16.56■□□□□ 0.24
CCDC149-201ENST00000324309 TNNT2P45379 298 aaPredicted RBP16.55■□□□□ 0.24
CCDC149-201ENST00000324309 ASXL2Q76L83 1435 aa16.55■□□□□ 0.24
CCDC149-201ENST00000324309 AMPHP49418 695 aa16.55■□□□□ 0.24
CCDC149-201ENST00000324309 TXNDC2Q86VQ3 553 aa16.54■□□□□ 0.24
CCDC149-201ENST00000324309 PLCH2O75038 1416 aa16.54■□□□□ 0.24
CCDC149-201ENST00000324309 PTPN23Q9H3S7 1636 aa16.53■□□□□ 0.24
CCDC149-201ENST00000324309 PSME1Q06323 249 aa16.53■□□□□ 0.24
CCDC149-201ENST00000324309 NGEFQ8N5V2 710 aa16.53■□□□□ 0.24
CCDC149-201ENST00000324309 DMRT2Q9Y5R5 561 aa16.53■□□□□ 0.24
CCDC149-201ENST00000324309 USP47Q96K76 1375 aa16.52■□□□□ 0.24
CCDC149-201ENST00000324309 ABCC2Q92887 1545 aa16.52■□□□□ 0.23
CCDC149-201ENST00000324309 CASC1Q6TDU7 716 aa16.52■□□□□ 0.23
CCDC149-201ENST00000324309 MIER1Q8N108 512 aa16.51■□□□□ 0.23
CCDC149-201ENST00000324309 NUTM2DQ5VT03 806 aaPredicted RBP16.51■□□□□ 0.23
CCDC149-201ENST00000324309 BCL11AQ9H165 835 aa16.51■□□□□ 0.23
CCDC149-201ENST00000324309 LAS1LQ9Y4W2 734 aaKnown RBP16.51■□□□□ 0.23
CCDC149-201ENST00000324309 GTF3C3Q9Y5Q9 886 aa16.51■□□□□ 0.23
CCDC149-201ENST00000324309 IPO8O15397 1037 aaKnown RBP16.51■□□□□ 0.23
CCDC149-201ENST00000324309 CFAP44Q96MT7 982 aa16.51■□□□□ 0.23
CCDC149-201ENST00000324309 RAPGEF3O95398 923 aa16.51■□□□□ 0.23
CCDC149-201ENST00000324309 ARXQ96QS3 562 aa16.51■□□□□ 0.23
CCDC149-201ENST00000324309 CCDC9Q9Y3X0 531 aaKnown RBP16.5■□□□□ 0.23
CCDC149-201ENST00000324309 NLRP13Q86W25 1043 aa16.5■□□□□ 0.23
CCDC149-201ENST00000324309 GPRASP1Q5JY77 1395 aa16.5■□□□□ 0.23
CCDC149-201ENST00000324309 ZNF518AQ6AHZ1 1483 aa16.49■□□□□ 0.23
CCDC149-201ENST00000324309 HMGB2P26583 209 aaKnown RBP16.49■□□□□ 0.23
CCDC149-201ENST00000324309 FKBP8Q14318 412 aa16.49■□□□□ 0.23
CCDC149-201ENST00000324309 U2AF1L5P0DN76 240 aaPredicted RBP16.48■□□□□ 0.23
CCDC149-201ENST00000324309 U2AF1Q01081 240 aaKnown RBP eCLIP16.48■□□□□ 0.23
CCDC149-201ENST00000324309 ATP10BO94823 1461 aa16.47■□□□□ 0.23
CCDC149-201ENST00000324309 SOX12O15370 315 aa16.47■□□□□ 0.23
CCDC149-201ENST00000324309 DHX29Q7Z478 1369 aaKnown RBP16.46■□□□□ 0.23
CCDC149-201ENST00000324309 HSP90AA1P07900 732 aaKnown RBP16.45■□□□□ 0.22
CCDC149-201ENST00000324309 NEUROD2Q15784 382 aa16.45■□□□□ 0.22
CCDC149-201ENST00000324309 ST20-MTHFSA0A0A6YYL1 179 aa16.44■□□□□ 0.22
CCDC149-201ENST00000324309 EVA1CP58658 441 aa16.44■□□□□ 0.22
CCDC149-201ENST00000324309 TMX4Q9H1E5 349 aaPredicted RBP16.44■□□□□ 0.22
CCDC149-201ENST00000324309 MINK1Q8N4C8 1332 aaPredicted RBP16.44■□□□□ 0.22
CCDC149-201ENST00000324309 ABCC10Q5T3U5 1492 aa16.44■□□□□ 0.22
CCDC149-201ENST00000324309 PROSER2Q86WR7 435 aaPredicted RBP16.44■□□□□ 0.22
CCDC149-201ENST00000324309 ERBINQ96RT1 1412 aa16.43■□□□□ 0.22
CCDC149-201ENST00000324309 MEX3CQ5U5Q3 659 aaKnown RBP16.43■□□□□ 0.22
CCDC149-201ENST00000324309 MYBBP1AQ9BQG0 1328 aaKnown RBP16.43■□□□□ 0.22
CCDC149-201ENST00000324309 ABCC5O15440 1437 aa16.43■□□□□ 0.22
CCDC149-201ENST00000324309 PDE3BQ13370 1112 aa16.42■□□□□ 0.22
CCDC149-201ENST00000324309 DUOX2Q9NRD8 1548 aa16.42■□□□□ 0.22
CCDC149-201ENST00000324309 TARBP1Q13395 1621 aaKnown RBP16.42■□□□□ 0.22
CCDC149-201ENST00000324309 NUP153P49790 1475 aaKnown RBP16.42■□□□□ 0.22
CCDC149-201ENST00000324309 CFAP74Q9C0B2 1584 aa16.41■□□□□ 0.22
CCDC149-201ENST00000324309 STK31Q9BXU1 1019 aa16.41■□□□□ 0.22
CCDC149-201ENST00000324309 ZNF692Q9BU19 519 aaPredicted RBP16.4■□□□□ 0.22
CCDC149-201ENST00000324309 CEP170Q5SW79 1584 aa16.4■□□□□ 0.22
CCDC149-201ENST00000324309 GPATCH8Q9UKJ3 1502 aaKnown RBP16.4■□□□□ 0.22
CCDC149-201ENST00000324309 C1orf141Q5JVX7 400 aa16.4■□□□□ 0.22
CCDC149-201ENST00000324309 CNTLNQ9NXG0 1405 aa16.39■□□□□ 0.21
CCDC149-201ENST00000324309 RTEL1-TNFRSF6BF6WH68 1400 aa16.39■□□□□ 0.21
CCDC149-201ENST00000324309 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.38■□□□□ 0.21
CCDC149-201ENST00000324309 UHRF1BP1LA0JNW5 1464 aa16.37■□□□□ 0.21
CCDC149-201ENST00000324309 OS9Q13438 667 aaPredicted RBP16.37■□□□□ 0.21
CCDC149-201ENST00000324309 PANK3Q9H999 370 aa16.36■□□□□ 0.21
CCDC149-201ENST00000324309 SHANK2Q9UPX8 1470 aa16.36■□□□□ 0.21
CCDC149-201ENST00000324309 GOLGA2Q08379 1002 aa16.36■□□□□ 0.21
CCDC149-201ENST00000324309 ATAD2Q6PL18 1390 aa16.36■□□□□ 0.21
CCDC149-201ENST00000324309 FAM135AQ9P2D6 1515 aa16.36■□□□□ 0.21
CCDC149-201ENST00000324309 WASHC2AQ641Q2 1341 aa16.35■□□□□ 0.21
CCDC149-201ENST00000324309 NAIPQ13075 1403 aa16.35■□□□□ 0.21
CCDC149-201ENST00000324309 A2MP01023 1474 aa16.34■□□□□ 0.21
CCDC149-201ENST00000324309 NCOA1Q15788 1441 aa16.34■□□□□ 0.21
CCDC149-201ENST00000324309 NEO1Q92859 1461 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms