RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 KIF7Q2M1P5 1343 aa21.05■□□□□ 0.96
SFXN1-201ENST00000321442 CCDC144AA2RUR9 1427 aa21.04■□□□□ 0.96
SFXN1-201ENST00000321442 GOLGA6L22H0YM25 854 aa21.04■□□□□ 0.96
SFXN1-201ENST00000321442 CCDC146Q8IYE0 955 aa21.04■□□□□ 0.96
SFXN1-201ENST00000321442 PCF11O94913 1555 aaKnown RBP21.03■□□□□ 0.96
SFXN1-201ENST00000321442 KIAA0586Q9BVV6 1533 aa21.03■□□□□ 0.96
SFXN1-201ENST00000321442 CRBNQ96SW2 442 aa21.02■□□□□ 0.96
SFXN1-201ENST00000321442 CCDC7Q96M83 1385 aa21.01■□□□□ 0.95
SFXN1-201ENST00000321442 CLUAP1Q96AJ1 413 aa21.01■□□□□ 0.95
SFXN1-201ENST00000321442 EPRSP07814 1512 aaKnown RBP21■□□□□ 0.95
SFXN1-201ENST00000321442 BIVM-ERCC5R4GMW8 1640 aa21■□□□□ 0.95
SFXN1-201ENST00000321442 NBPF8Q3BBV2 869 aa20.99■□□□□ 0.95
SFXN1-201ENST00000321442 PDE3BQ13370 1112 aa20.99■□□□□ 0.95
SFXN1-201ENST00000321442 GRIN2AQ12879 1464 aa20.99■□□□□ 0.95
SFXN1-201ENST00000321442 GOLGA2Q08379 1002 aa20.99■□□□□ 0.95
SFXN1-201ENST00000321442 UACAQ9BZF9 1416 aa20.99■□□□□ 0.95
SFXN1-201ENST00000321442 SYNJ2O15056 1496 aa20.98■□□□□ 0.95
SFXN1-201ENST00000321442 TMEM132EQ6IEE7 984 aa20.98■□□□□ 0.95
SFXN1-201ENST00000321442 HSP90AB1P08238 724 aaKnown RBP20.98■□□□□ 0.95
SFXN1-201ENST00000321442 NBPF1Q3BBV0 1214 aa20.98■□□□□ 0.95
SFXN1-201ENST00000321442 MORC1Q86VD1 984 aa20.98■□□□□ 0.95
SFXN1-201ENST00000321442 WDR97A6NE52 1622 aa20.98■□□□□ 0.95
SFXN1-201ENST00000321442 MYBBP1AQ9BQG0 1328 aaKnown RBP20.97■□□□□ 0.95
SFXN1-201ENST00000321442 USP47Q96K76 1375 aa20.97■□□□□ 0.95
SFXN1-201ENST00000321442 GSE1Q14687 1217 aa20.97■□□□□ 0.95
SFXN1-201ENST00000321442 USP35Q9P2H5 1018 aa20.97■□□□□ 0.95
SFXN1-201ENST00000321442 IQGAP2Q13576 1575 aa20.97■□□□□ 0.95
SFXN1-201ENST00000321442 TROQ12816 1431 aaPredicted RBP20.96■□□□□ 0.95
SFXN1-201ENST00000321442 ARHGAP5Q13017 1502 aa20.96■□□□□ 0.95
SFXN1-201ENST00000321442 EFCAB5A4FU69 1503 aa20.96■□□□□ 0.95
SFXN1-201ENST00000321442 ARHGEF11O15085 1522 aa20.95■□□□□ 0.94
SFXN1-201ENST00000321442 PANK3Q9H999 370 aa20.95■□□□□ 0.94
SFXN1-201ENST00000321442 MAPK8IP3Q9UPT6 1336 aa20.94■□□□□ 0.94
SFXN1-201ENST00000321442 SCAPERQ9BY12 1400 aa20.94■□□□□ 0.94
SFXN1-201ENST00000321442 L1TD1Q5T7N2 865 aaKnown RBP20.94■□□□□ 0.94
SFXN1-201ENST00000321442 IL27Q8NEV9 243 aa20.94■□□□□ 0.94
SFXN1-201ENST00000321442 HSCBQ8IWL3 235 aa20.93■□□□□ 0.94
SFXN1-201ENST00000321442 AKNAQ7Z591 1439 aa20.92■□□□□ 0.94
SFXN1-201ENST00000321442 CNTLNQ9NXG0 1405 aa20.91■□□□□ 0.94
SFXN1-201ENST00000321442 PTMAP06454 111 aaKnown RBP20.91■□□□□ 0.94
SFXN1-201ENST00000321442 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.9■□□□□ 0.94
SFXN1-201ENST00000321442 CDCA7LQ96GN5 454 aa20.9■□□□□ 0.94
SFXN1-201ENST00000321442 ANO8Q9HCE9 1232 aaPredicted RBP20.9■□□□□ 0.94
SFXN1-201ENST00000321442 PNNQ9H307 717 aaKnown RBP20.89■□□□□ 0.94
SFXN1-201ENST00000321442 MINK1Q8N4C8 1332 aaPredicted RBP20.89■□□□□ 0.93
SFXN1-201ENST00000321442 DNTTIP2Q5QJE6 756 aaKnown RBP20.88■□□□□ 0.93
SFXN1-201ENST00000321442 BCL2L13Q9BXK5 485 aa20.88■□□□□ 0.93
SFXN1-201ENST00000321442 MFAP1P55081 439 aaKnown RBP20.88■□□□□ 0.93
SFXN1-201ENST00000321442 FAM161AQ3B820 660 aa20.88■□□□□ 0.93
SFXN1-201ENST00000321442 CFAP70Q5T0N1 1121 aa20.88■□□□□ 0.93
SFXN1-201ENST00000321442 NAIPQ13075 1403 aa20.87■□□□□ 0.93
SFXN1-201ENST00000321442 C9orf84Q5VXU9 1444 aa20.86■□□□□ 0.93
SFXN1-201ENST00000321442 RRP7AQ9Y3A4 280 aaKnown RBP20.85■□□□□ 0.93
SFXN1-201ENST00000321442 HAP1P54257 671 aaPredicted RBP20.85■□□□□ 0.93
SFXN1-201ENST00000321442 U2AF1L5P0DN76 240 aaPredicted RBP20.84■□□□□ 0.93
SFXN1-201ENST00000321442 U2AF1Q01081 240 aaKnown RBP eCLIP20.84■□□□□ 0.93
SFXN1-201ENST00000321442 CENPQQ7L2Z9 268 aaPredicted RBP20.84■□□□□ 0.93
SFXN1-201ENST00000321442 MS4A1P11836 297 aa20.84■□□□□ 0.93
SFXN1-201ENST00000321442 PLCB2Q00722 1185 aa20.83■□□□□ 0.93
SFXN1-201ENST00000321442 NFKBIBQ15653 356 aa20.83■□□□□ 0.92
SFXN1-201ENST00000321442 HFM1A2PYH4 1435 aa20.82■□□□□ 0.92
SFXN1-201ENST00000321442 COG6Q9Y2V7 657 aa20.82■□□□□ 0.92
SFXN1-201ENST00000321442 DAPK1P53355 1430 aa20.82■□□□□ 0.92
SFXN1-201ENST00000321442 EHBP1L1Q8N3D4 1523 aa20.82■□□□□ 0.92
SFXN1-201ENST00000321442 BRPF3Q9ULD4 1205 aa20.81■□□□□ 0.92
SFXN1-201ENST00000321442 APAF1O14727 1248 aa20.81■□□□□ 0.92
SFXN1-201ENST00000321442 C11orf95C9JLR9 678 aaPredicted RBP20.81■□□□□ 0.92
SFXN1-201ENST00000321442 RWDD1Q9H446 243 aaPredicted RBP20.81■□□□□ 0.92
SFXN1-201ENST00000321442 FOXD4L1Q9NU39 408 aa20.8■□□□□ 0.92
SFXN1-201ENST00000321442 GOLGA6L3A6NEY3 463 aa20.8■□□□□ 0.92
SFXN1-201ENST00000321442 APBB1O00213 710 aa20.8■□□□□ 0.92
SFXN1-201ENST00000321442 KIF21AQ7Z4S6 1674 aa20.8■□□□□ 0.92
SFXN1-201ENST00000321442 ITPRIPQ8IWB1 547 aa20.8■□□□□ 0.92
SFXN1-201ENST00000321442 CUL7Q14999 1698 aa20.79■□□□□ 0.92
SFXN1-201ENST00000321442 ARID3AQ99856 593 aa20.79■□□□□ 0.92
SFXN1-201ENST00000321442 CENPJQ9HC77 1338 aaPredicted RBP20.79■□□□□ 0.92
SFXN1-201ENST00000321442 PTPRKQ15262 1439 aa20.79■□□□□ 0.92
SFXN1-201ENST00000321442 HECW1Q76N89 1606 aa20.78■□□□□ 0.92
SFXN1-201ENST00000321442 MAGI1Q96QZ7 1491 aaPredicted RBP20.77■□□□□ 0.92
SFXN1-201ENST00000321442 THOC2Q8NI27 1593 aaKnown RBP20.77■□□□□ 0.92
SFXN1-201ENST00000321442 HDGFP51858 240 aaKnown RBP20.76■□□□□ 0.91
SFXN1-201ENST00000321442 SKAP1Q86WV1 359 aa20.75■□□□□ 0.91
SFXN1-201ENST00000321442 MIA2Q96PC5 1412 aa20.75■□□□□ 0.91
SFXN1-201ENST00000321442 PNISRQ8TF01 805 aaKnown RBP20.74■□□□□ 0.91
SFXN1-201ENST00000321442 ABCC5O15440 1437 aa20.74■□□□□ 0.91
SFXN1-201ENST00000321442 VGFO15240 615 aaPredicted RBP20.73■□□□□ 0.91
SFXN1-201ENST00000321442 HDGFL2Q7Z4V5 671 aaPredicted RBP20.73■□□□□ 0.91
SFXN1-201ENST00000321442 PMFBP1Q8TBY8 1022 aa20.73■□□□□ 0.91
SFXN1-201ENST00000321442 MSNP26038 577 aaKnown RBP20.73■□□□□ 0.91
SFXN1-201ENST00000321442 SMC4Q9NTJ3 1288 aa20.73■□□□□ 0.91
SFXN1-201ENST00000321442 CASC1Q6TDU7 716 aa20.72■□□□□ 0.91
SFXN1-201ENST00000321442 LTV1Q96GA3 475 aaPredicted RBP20.72■□□□□ 0.91
SFXN1-201ENST00000321442 SUPT6HQ7KZ85 1726 aaKnown RBP20.71■□□□□ 0.91
SFXN1-201ENST00000321442 FRAT2O75474 233 aaPredicted RBP20.7■□□□□ 0.9
SFXN1-201ENST00000321442 BACH2Q9BYV9 841 aa20.7■□□□□ 0.9
SFXN1-201ENST00000321442 CABP2Q9NPB3 220 aa20.7■□□□□ 0.9
SFXN1-201ENST00000321442 ADAMTS8Q9UP79 889 aa20.7■□□□□ 0.9
SFXN1-201ENST00000321442 GBP4Q96PP9 640 aa20.68■□□□□ 0.9
SFXN1-201ENST00000321442 EID1Q9Y6B2 187 aa20.68■□□□□ 0.9
SFXN1-201ENST00000321442 NGDNQ8NEJ9 315 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms