RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 MAST1Q9Y2H9 1570 aa28.37■■■□□ 2.13
CPNE7-202ENST00000319518 PLEKHH2Q8IVE3 1493 aa28.36■■■□□ 2.13
CPNE7-202ENST00000319518 FAM135AQ9P2D6 1515 aa28.35■■■□□ 2.13
CPNE7-202ENST00000319518 TRAPPC8Q9Y2L5 1435 aa28.33■■■□□ 2.13
CPNE7-202ENST00000319518 KDM5CP41229 1560 aa28.33■■■□□ 2.12
CPNE7-202ENST00000319518 FANCIQ9NVI1 1328 aa28.31■■■□□ 2.12
CPNE7-202ENST00000319518 ABCC1P33527 1531 aa28.3■■■□□ 2.12
CPNE7-202ENST00000319518 KDM2AQ9Y2K7 1162 aa28.29■■■□□ 2.12
CPNE7-202ENST00000319518 PLXNC1O60486 1568 aa28.28■■■□□ 2.12
CPNE7-202ENST00000319518 B4GALNT3Q6L9W6 998 aa28.28■■■□□ 2.12
CPNE7-202ENST00000319518 WDR7Q9Y4E6 1490 aa28.28■■■□□ 2.12
CPNE7-202ENST00000319518 AFAP1Q8N556 730 aa28.28■■■□□ 2.12
CPNE7-202ENST00000319518 CNGB1Q14028 1251 aaPredicted RBP28.26■■■□□ 2.11
CPNE7-202ENST00000319518 UHRF1BP1Q6BDS2 1440 aa28.25■■■□□ 2.11
CPNE7-202ENST00000319518 OSCARQ8IYS5 282 aa28.25■■■□□ 2.11
CPNE7-202ENST00000319518 UNC13BO14795 1591 aa28.24■■■□□ 2.11
CPNE7-202ENST00000319518 POLR3GLQ9BT43 218 aa28.24■■■□□ 2.11
CPNE7-202ENST00000319518 DUOX2Q9NRD8 1548 aa28.22■■■□□ 2.11
CPNE7-202ENST00000319518 RALGAPBQ86X10 1494 aa28.22■■■□□ 2.11
CPNE7-202ENST00000319518 DCAF11Q8TEB1 546 aa28.22■■■□□ 2.11
CPNE7-202ENST00000319518 SMG6Q86US8 1419 aaKnown RBP28.21■■■□□ 2.11
CPNE7-202ENST00000319518 ARID4BQ4LE39 1312 aaPredicted RBP28.2■■■□□ 2.1
CPNE7-202ENST00000319518 SPAG9O60271 1321 aaKnown RBP28.19■■■□□ 2.1
CPNE7-202ENST00000319518 ASXL2Q76L83 1435 aa28.18■■■□□ 2.1
CPNE7-202ENST00000319518 PLA2R1Q13018 1463 aa28.18■■■□□ 2.1
CPNE7-202ENST00000319518 RGL3Q3MIN7 710 aa28.17■■■□□ 2.1
CPNE7-202ENST00000319518 FANCAO15360 1455 aa28.15■■■□□ 2.1
CPNE7-202ENST00000319518 CCDC144AA2RUR9 1427 aa28.15■■■□□ 2.1
CPNE7-202ENST00000319518 ERBINQ96RT1 1412 aa28.15■■■□□ 2.1
CPNE7-202ENST00000319518 IQGAP3Q86VI3 1631 aa28.15■■■□□ 2.1
CPNE7-202ENST00000319518 CARD11Q9BXL7 1154 aa28.13■■■□□ 2.09
CPNE7-202ENST00000319518 PNISRQ8TF01 805 aaKnown RBP28.12■■■□□ 2.09
CPNE7-202ENST00000319518 NUDCQ9Y266 331 aa28.12■■■□□ 2.09
CPNE7-202ENST00000319518 ARAP3Q8WWN8 1544 aa28.12■■■□□ 2.09
CPNE7-202ENST00000319518 RNF123Q5XPI4 1314 aa28.12■■■□□ 2.09
CPNE7-202ENST00000319518 ABCA9Q8IUA7 1624 aa28.11■■■□□ 2.09
CPNE7-202ENST00000319518 ZFYVE16Q7Z3T8 1539 aa28.11■■■□□ 2.09
CPNE7-202ENST00000319518 SENP3-EIF4A1A0A087X0R7 540 aa28.1■■■□□ 2.09
CPNE7-202ENST00000319518 ROCK2O75116 1388 aaKnown RBP28.1■■■□□ 2.09
CPNE7-202ENST00000319518 MAGI2Q86UL8 1455 aa28.09■■■□□ 2.09
CPNE7-202ENST00000319518 ST20-MTHFSA0A0A6YYL1 179 aa28.08■■■□□ 2.09
CPNE7-202ENST00000319518 MYT1LQ9UL68 1186 aa28.08■■■□□ 2.09
CPNE7-202ENST00000319518 SCAPERQ9BY12 1400 aa28.06■■■□□ 2.08
CPNE7-202ENST00000319518 ADGRL1O94910 1474 aa28.05■■■□□ 2.08
CPNE7-202ENST00000319518 NPM1P06748 294 aaKnown RBP eCLIP28.04■■■□□ 2.08
CPNE7-202ENST00000319518 RTEL1-TNFRSF6BF6WH68 1400 aa28.04■■■□□ 2.08
CPNE7-202ENST00000319518 TMC1Q8TDI8 760 aa28.02■■■□□ 2.08
CPNE7-202ENST00000319518 A2MP01023 1474 aa28.01■■■□□ 2.07
CPNE7-202ENST00000319518 LRPPRCP42704 1394 aaKnown RBP28.01■■■□□ 2.07
CPNE7-202ENST00000319518 ATP7AQ04656 1500 aa28.01■■■□□ 2.07
CPNE7-202ENST00000319518 E9PCH4 1651 aa28■■■□□ 2.07
CPNE7-202ENST00000319518 PRAG1Q86YV5 1406 aa27.99■■■□□ 2.07
CPNE7-202ENST00000319518 NBPF1Q3BBV0 1214 aa27.98■■■□□ 2.07
CPNE7-202ENST00000319518 INO80Q9ULG1 1556 aaPredicted RBP27.98■■■□□ 2.07
CPNE7-202ENST00000319518 KIF3BO15066 747 aa27.95■■■□□ 2.06
CPNE7-202ENST00000319518 BRD4O60885 1362 aaPredicted RBP27.94■■■□□ 2.06
CPNE7-202ENST00000319518 MYBBP1AQ9BQG0 1328 aaKnown RBP27.94■■■□□ 2.06
CPNE7-202ENST00000319518 TRPM1Q7Z4N2 1603 aa27.93■■■□□ 2.06
CPNE7-202ENST00000319518 ATP10AO60312 1499 aa27.93■■■□□ 2.06
CPNE7-202ENST00000319518 RALBP1Q15311 655 aa27.9■■■□□ 2.06
CPNE7-202ENST00000319518 ERICH6Q7L0X2 663 aa27.9■■■□□ 2.06
CPNE7-202ENST00000319518 KTN1Q86UP2 1357 aaKnown RBP27.9■■■□□ 2.06
CPNE7-202ENST00000319518 CCDC136Q96JN2 1154 aa27.89■■■□□ 2.05
CPNE7-202ENST00000319518 DEPDC5O75140 1603 aa27.88■■■□□ 2.05
CPNE7-202ENST00000319518 CD109Q6YHK3 1445 aa27.88■■■□□ 2.05
CPNE7-202ENST00000319518 BCL11AQ9H165 835 aa27.86■■■□□ 2.05
CPNE7-202ENST00000319518 KIDINS220Q9ULH0 1771 aa27.84■■■□□ 2.05
CPNE7-202ENST00000319518 PARD3Q8TEW0 1356 aa27.83■■■□□ 2.05
CPNE7-202ENST00000319518 PER1O15534 1290 aaPredicted RBP27.81■■■□□ 2.04
CPNE7-202ENST00000319518 KANK1Q14678 1352 aa27.81■■■□□ 2.04
CPNE7-202ENST00000319518 GPRASP1Q5JY77 1395 aa27.8■■■□□ 2.04
CPNE7-202ENST00000319518 MROH1Q8NDA8 1641 aa27.8■■■□□ 2.04
CPNE7-202ENST00000319518 ZNF518AQ6AHZ1 1483 aa27.8■■■□□ 2.04
CPNE7-202ENST00000319518 TRPM2O94759 1503 aa27.79■■■□□ 2.04
CPNE7-202ENST00000319518 SPHKAPQ2M3C7 1700 aa27.79■■■□□ 2.04
CPNE7-202ENST00000319518 TET3O43151 1660 aa27.79■■■□□ 2.04
CPNE7-202ENST00000319518 CLTCL1P53675 1640 aa27.78■■■□□ 2.04
CPNE7-202ENST00000319518 VWDEQ8N2E2 1590 aa27.78■■■□□ 2.04
CPNE7-202ENST00000319518 NLRP13Q86W25 1043 aa27.78■■■□□ 2.04
CPNE7-202ENST00000319518 PTPRTO14522 1441 aa27.77■■■□□ 2.04
CPNE7-202ENST00000319518 COL17A1Q9UMD9 1497 aaPredicted RBP27.75■■■□□ 2.03
CPNE7-202ENST00000319518 RRP1P56182 461 aaKnown RBP27.75■■■□□ 2.03
CPNE7-202ENST00000319518 TESK2Q96S53 571 aa27.75■■■□□ 2.03
CPNE7-202ENST00000319518 PRDM15P57071 1507 aaPredicted RBP27.75■■■□□ 2.03
CPNE7-202ENST00000319518 POGZQ7Z3K3 1410 aa27.74■■■□□ 2.03
CPNE7-202ENST00000319518 DISP3Q9P2K9 1392 aa27.74■■■□□ 2.03
CPNE7-202ENST00000319518 PAK3O75914 559 aaPredicted RBP27.74■■■□□ 2.03
CPNE7-202ENST00000319518 CYB5RLQ6IPT4 315 aa27.74■■■□□ 2.03
CPNE7-202ENST00000319518 EIF2AK4Q9P2K8 1649 aaKnown RBP27.74■■■□□ 2.03
CPNE7-202ENST00000319518 UGGT1Q9NYU2 1555 aa27.73■■■□□ 2.03
CPNE7-202ENST00000319518 SALL2Q9Y467 1007 aaPredicted RBP27.73■■■□□ 2.03
CPNE7-202ENST00000319518 RAPGEF3O95398 923 aa27.72■■■□□ 2.03
CPNE7-202ENST00000319518 NOP58Q9Y2X3 529 aaKnown RBP27.72■■■□□ 2.03
CPNE7-202ENST00000319518 CEP152O94986 1710 aa27.71■■■□□ 2.03
CPNE7-202ENST00000319518 LAMC1P11047 1609 aa27.71■■■□□ 2.03
CPNE7-202ENST00000319518 EXOC6Q8TAG9 804 aa27.69■■■□□ 2.02
CPNE7-202ENST00000319518 RCAN3Q9UKA8 241 aa27.69■■■□□ 2.02
CPNE7-202ENST00000319518 CFAP74Q9C0B2 1584 aa27.68■■■□□ 2.02
CPNE7-202ENST00000319518 MADDQ8WXG6 1647 aa27.68■■■□□ 2.02
CPNE7-202ENST00000319518 GGT6Q6P531 493 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms