RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 PLEKHD1A6NEE1 506 aa21.7■■□□□ 1.06
CACFD1-202ENST00000316948 RALGAPBQ86X10 1494 aa21.69■■□□□ 1.06
CACFD1-202ENST00000316948 C9orf84Q5VXU9 1444 aa21.69■■□□□ 1.06
CACFD1-202ENST00000316948 UHRF1BP1Q6BDS2 1440 aa21.69■■□□□ 1.06
CACFD1-202ENST00000316948 DCAF11Q8TEB1 546 aa21.68■■□□□ 1.06
CACFD1-202ENST00000316948 BACH2Q9BYV9 841 aa21.68■■□□□ 1.06
CACFD1-202ENST00000316948 CDC42BPAQ5VT25 1732 aa21.67■■□□□ 1.06
CACFD1-202ENST00000316948 CARMIL2Q6F5E8 1435 aa21.66■■□□□ 1.06
CACFD1-202ENST00000316948 ROCK2O75116 1388 aaKnown RBP21.66■■□□□ 1.06
CACFD1-202ENST00000316948 TSPY4P0CV99 314 aa21.65■■□□□ 1.06
CACFD1-202ENST00000316948 TSPY10P0CW01 314 aa21.65■■□□□ 1.06
CACFD1-202ENST00000316948 SKAP1Q86WV1 359 aa21.65■■□□□ 1.06
CACFD1-202ENST00000316948 MAGI1Q96QZ7 1491 aaPredicted RBP21.65■■□□□ 1.06
CACFD1-202ENST00000316948 HNRNPMP52272 730 aaKnown RBP eCLIP21.65■■□□□ 1.06
CACFD1-202ENST00000316948 SYNJ2O15056 1496 aa21.65■■□□□ 1.06
CACFD1-202ENST00000316948 KIF15Q9NS87 1388 aa21.65■■□□□ 1.06
CACFD1-202ENST00000316948 MYBBP1AQ9BQG0 1328 aaKnown RBP21.64■■□□□ 1.05
CACFD1-202ENST00000316948 LRPPRCP42704 1394 aaKnown RBP21.63■■□□□ 1.05
CACFD1-202ENST00000316948 PLIN1O60240 522 aa21.62■■□□□ 1.05
CACFD1-202ENST00000316948 USP35Q9P2H5 1018 aa21.62■■□□□ 1.05
CACFD1-202ENST00000316948 ABCC10Q5T3U5 1492 aa21.62■■□□□ 1.05
CACFD1-202ENST00000316948 CDCA7LQ96GN5 454 aa21.61■■□□□ 1.05
CACFD1-202ENST00000316948 ATP10BO94823 1461 aa21.61■■□□□ 1.05
CACFD1-202ENST00000316948 BRD4O60885 1362 aaPredicted RBP21.6■■□□□ 1.05
CACFD1-202ENST00000316948 ARHGEF12Q9NZN5 1544 aa21.6■■□□□ 1.05
CACFD1-202ENST00000316948 PPM1GO15355 546 aaPredicted RBP21.6■■□□□ 1.05
CACFD1-202ENST00000316948 ERCC6Q03468 1493 aa21.6■■□□□ 1.05
CACFD1-202ENST00000316948 MS4A1P11836 297 aa21.59■■□□□ 1.05
CACFD1-202ENST00000316948 SHANK2Q9UPX8 1470 aa21.59■■□□□ 1.05
CACFD1-202ENST00000316948 RALBP1Q15311 655 aa21.59■■□□□ 1.05
CACFD1-202ENST00000316948 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.59■■□□□ 1.05
CACFD1-202ENST00000316948 NUP160Q12769 1436 aa21.56■■□□□ 1.04
CACFD1-202ENST00000316948 ABCA8O94911 1581 aa21.55■■□□□ 1.04
CACFD1-202ENST00000316948 KDM5DQ9BY66 1539 aa21.55■■□□□ 1.04
CACFD1-202ENST00000316948 RGL3Q3MIN7 710 aa21.54■■□□□ 1.04
CACFD1-202ENST00000316948 SLC4A3P48751 1232 aa21.54■■□□□ 1.04
CACFD1-202ENST00000316948 PTPRGP23470 1445 aa21.53■■□□□ 1.04
CACFD1-202ENST00000316948 CRBNQ96SW2 442 aa21.53■■□□□ 1.04
CACFD1-202ENST00000316948 NLRP13Q86W25 1043 aa21.52■■□□□ 1.03
CACFD1-202ENST00000316948 BRPF3Q9ULD4 1205 aa21.52■■□□□ 1.03
CACFD1-202ENST00000316948 WASHC2CQ9Y4E1 1318 aa21.51■■□□□ 1.03
CACFD1-202ENST00000316948 PDE3BQ13370 1112 aa21.51■■□□□ 1.03
CACFD1-202ENST00000316948 NBPF1Q3BBV0 1214 aa21.51■■□□□ 1.03
CACFD1-202ENST00000316948 DDRGK1Q96HY6 314 aa21.5■■□□□ 1.03
CACFD1-202ENST00000316948 E9PCH4 1651 aa21.49■■□□□ 1.03
CACFD1-202ENST00000316948 FAM135AQ9P2D6 1515 aa21.48■■□□□ 1.03
CACFD1-202ENST00000316948 KTN1Q86UP2 1357 aaKnown RBP21.48■■□□□ 1.03
CACFD1-202ENST00000316948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.48■■□□□ 1.03
CACFD1-202ENST00000316948 CCDC144AA2RUR9 1427 aa21.47■■□□□ 1.03
CACFD1-202ENST00000316948 GSE1Q14687 1217 aa21.47■■□□□ 1.03
CACFD1-202ENST00000316948 CC2D1BQ5T0F9 858 aaKnown RBP21.46■■□□□ 1.03
CACFD1-202ENST00000316948 PRAG1Q86YV5 1406 aa21.46■■□□□ 1.03
CACFD1-202ENST00000316948 NFKBIBQ15653 356 aa21.46■■□□□ 1.03
CACFD1-202ENST00000316948 DAXXQ9UER7 740 aaPredicted RBP21.46■■□□□ 1.03
CACFD1-202ENST00000316948 ARHGEF5Q12774 1597 aa21.45■■□□□ 1.02
CACFD1-202ENST00000316948 CCDC141Q6ZP82 1450 aa21.45■■□□□ 1.02
CACFD1-202ENST00000316948 PARD3Q8TEW0 1356 aa21.44■■□□□ 1.02
CACFD1-202ENST00000316948 SAMD9LQ8IVG5 1584 aa21.44■■□□□ 1.02
CACFD1-202ENST00000316948 C20orf194Q5TEA3 1177 aa21.43■■□□□ 1.02
CACFD1-202ENST00000316948 TRPM1Q7Z4N2 1603 aa21.43■■□□□ 1.02
CACFD1-202ENST00000316948 PER1O15534 1290 aaPredicted RBP21.43■■□□□ 1.02
CACFD1-202ENST00000316948 CDC42BPBQ9Y5S2 1711 aa21.42■■□□□ 1.02
CACFD1-202ENST00000316948 FRAT1Q92837 279 aaPredicted RBP21.4■■□□□ 1.02
CACFD1-202ENST00000316948 PLA2R1Q13018 1463 aa21.4■■□□□ 1.02
CACFD1-202ENST00000316948 DISP3Q9P2K9 1392 aa21.39■■□□□ 1.02
CACFD1-202ENST00000316948 A2MP01023 1474 aa21.38■■□□□ 1.01
CACFD1-202ENST00000316948 SYCP2Q9BX26 1530 aa21.37■■□□□ 1.01
CACFD1-202ENST00000316948 TESK2Q96S53 571 aa21.37■■□□□ 1.01
CACFD1-202ENST00000316948 PREX2Q70Z35 1606 aa21.36■■□□□ 1.01
CACFD1-202ENST00000316948 PANK3Q9H999 370 aa21.36■■□□□ 1.01
CACFD1-202ENST00000316948 RSPH4AQ5TD94 716 aa21.35■■□□□ 1.01
CACFD1-202ENST00000316948 COL17A1Q9UMD9 1497 aaPredicted RBP21.34■■□□□ 1.01
CACFD1-202ENST00000316948 GPRASP1Q5JY77 1395 aa21.34■■□□□ 1.01
CACFD1-202ENST00000316948 ARHGAP5Q13017 1502 aa21.32■■□□□ 1
CACFD1-202ENST00000316948 PLEKHH2Q8IVE3 1493 aa21.31■■□□□ 1
CACFD1-202ENST00000316948 RGS3P49796 1198 aa21.31■■□□□ 1
CACFD1-202ENST00000316948 KDM2BQ8NHM5 1336 aa21.3■■□□□ 1
CACFD1-202ENST00000316948 EIF5BO60841 1220 aaKnown RBP21.3■■□□□ 1
CACFD1-202ENST00000316948 ERBINQ96RT1 1412 aa21.3■■□□□ 1
CACFD1-202ENST00000316948 TTC37Q6PGP7 1564 aa21.29■■□□□ 1
CACFD1-202ENST00000316948 PRDM15P57071 1507 aaPredicted RBP21.29■■□□□ 1
CACFD1-202ENST00000316948 FRAT2O75474 233 aaPredicted RBP21.29■■□□□ 1
CACFD1-202ENST00000316948 FAM161AQ3B820 660 aa21.29■■□□□ 1
CACFD1-202ENST00000316948 CENPQQ7L2Z9 268 aaPredicted RBP21.29■■□□□ 1
CACFD1-202ENST00000316948 UNC13BO14795 1591 aa21.29■■□□□ 1
CACFD1-202ENST00000316948 MYO5CQ9NQX4 1742 aa21.28■■□□□ 1
CACFD1-202ENST00000316948 ADAMTS8Q9UP79 889 aa21.28■■□□□ 1
CACFD1-202ENST00000316948 TMF1P82094 1093 aa21.28■■□□□ 1
CACFD1-202ENST00000316948 C8orf34Q49A92 452 aa21.27■■□□□ 1
CACFD1-202ENST00000316948 BLMP54132 1417 aaPredicted RBP21.26■□□□□ 0.99
CACFD1-202ENST00000316948 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.24■□□□□ 0.99
CACFD1-202ENST00000316948 IQGAP3Q86VI3 1631 aa21.23■□□□□ 0.99
CACFD1-202ENST00000316948 MAST1Q9Y2H9 1570 aa21.22■□□□□ 0.99
CACFD1-202ENST00000316948 LAMC1P11047 1609 aa21.22■□□□□ 0.99
CACFD1-202ENST00000316948 DUSP27Q5VZP5 1158 aa21.2■□□□□ 0.98
CACFD1-202ENST00000316948 EIF2AK4Q9P2K8 1649 aaKnown RBP21.2■□□□□ 0.98
CACFD1-202ENST00000316948 WDR43Q15061 677 aaKnown RBP eCLIP21.19■□□□□ 0.98
CACFD1-202ENST00000316948 PLEKHH1Q9ULM0 1364 aa21.19■□□□□ 0.98
CACFD1-202ENST00000316948 ZMYM4Q5VZL5 1548 aa21.18■□□□□ 0.98
CACFD1-202ENST00000316948 PLXNC1O60486 1568 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms