RNA–Protein interactions for RNA: ENST00000316341.7

SLC12A4-201, Transcript of solute carrier family 12 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC12A4, Length 4,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-201ENST00000316341 CASC1Q6TDU7 716 aa23.13■■□□□ 1.29
SLC12A4-201ENST00000316341 MSNP26038 577 aaKnown RBP23.13■■□□□ 1.29
SLC12A4-201ENST00000316341 SRPK2P78362 688 aaKnown RBP23.13■■□□□ 1.29
SLC12A4-201ENST00000316341 FRAT2O75474 233 aaPredicted RBP23.12■■□□□ 1.29
SLC12A4-201ENST00000316341 CUX1P39880 1505 aa23.12■■□□□ 1.29
SLC12A4-201ENST00000316341 ADAMTS8Q9UP79 889 aa23.12■■□□□ 1.29
SLC12A4-201ENST00000316341 CCDC144AA2RUR9 1427 aa23.12■■□□□ 1.29
SLC12A4-201ENST00000316341 STK26Q9P289 416 aa23.1■■□□□ 1.29
SLC12A4-201ENST00000316341 SMG6Q86US8 1419 aaKnown RBP23.09■■□□□ 1.29
SLC12A4-201ENST00000316341 GBP4Q96PP9 640 aa23.09■■□□□ 1.29
SLC12A4-201ENST00000316341 FYCO1Q9BQS8 1478 aa23.08■■□□□ 1.29
SLC12A4-201ENST00000316341 NAIPQ13075 1403 aa23.08■■□□□ 1.28
SLC12A4-201ENST00000316341 PDS5BQ9NTI5 1447 aa23.07■■□□□ 1.28
SLC12A4-201ENST00000316341 BRD4O60885 1362 aaPredicted RBP23.07■■□□□ 1.28
SLC12A4-201ENST00000316341 RSPH6AQ9H0K4 717 aa23.05■■□□□ 1.28
SLC12A4-201ENST00000316341 MAPKBP1O60336 1514 aa23.05■■□□□ 1.28
SLC12A4-201ENST00000316341 E9PSI1 815 aa23.05■■□□□ 1.28
SLC12A4-201ENST00000316341 PANK1Q8TE04 598 aa23.05■■□□□ 1.28
SLC12A4-201ENST00000316341 CARMIL2Q6F5E8 1435 aa23.04■■□□□ 1.28
SLC12A4-201ENST00000316341 NBPF1Q3BBV0 1214 aa23.03■■□□□ 1.28
SLC12A4-201ENST00000316341 GGT6Q6P531 493 aa23.03■■□□□ 1.28
SLC12A4-201ENST00000316341 NUTM2DQ5VT03 806 aaPredicted RBP23.02■■□□□ 1.28
SLC12A4-201ENST00000316341 CGNL1Q0VF96 1302 aa23.02■■□□□ 1.28
SLC12A4-201ENST00000316341 IPO8O15397 1037 aaKnown RBP23.02■■□□□ 1.28
SLC12A4-201ENST00000316341 JPH4Q96JJ6 628 aa23.01■■□□□ 1.27
SLC12A4-201ENST00000316341 SOX12O15370 315 aa23■■□□□ 1.27
SLC12A4-201ENST00000316341 TRAK1Q9UPV9 953 aa23■■□□□ 1.27
SLC12A4-201ENST00000316341 KANK1Q14678 1352 aa22.99■■□□□ 1.27
SLC12A4-201ENST00000316341 CHMP4BQ9H444 224 aaKnown RBP22.99■■□□□ 1.27
SLC12A4-201ENST00000316341 GAPVD1Q14C86 1478 aa22.99■■□□□ 1.27
SLC12A4-201ENST00000316341 KIF3BO15066 747 aa22.99■■□□□ 1.27
SLC12A4-201ENST00000316341 ERCC6Q03468 1493 aa22.97■■□□□ 1.27
SLC12A4-201ENST00000316341 NCAPD3P42695 1498 aa22.97■■□□□ 1.27
SLC12A4-201ENST00000316341 HSP90AA2PQ14568 343 aaPredicted RBP22.96■■□□□ 1.27
SLC12A4-201ENST00000316341 ANKRD50Q9ULJ7 1429 aa22.95■■□□□ 1.26
SLC12A4-201ENST00000316341 C14orf37Q86TY3 774 aa22.95■■□□□ 1.26
SLC12A4-201ENST00000316341 VSIG10Q8N0Z9 540 aa22.94■■□□□ 1.26
SLC12A4-201ENST00000316341 ELL2O00472 640 aaPredicted RBP22.94■■□□□ 1.26
SLC12A4-201ENST00000316341 BCAR3O75815 825 aa22.93■■□□□ 1.26
SLC12A4-201ENST00000316341 EFCAB2Q5VUJ9 269 aa22.93■■□□□ 1.26
SLC12A4-201ENST00000316341 FOXD4L5Q5VV16 416 aaPredicted RBP22.93■■□□□ 1.26
SLC12A4-201ENST00000316341 FOXD4L4Q8WXT5 416 aaPredicted RBP22.93■■□□□ 1.26
SLC12A4-201ENST00000316341 C20orf194Q5TEA3 1177 aa22.92■■□□□ 1.26
SLC12A4-201ENST00000316341 EIF3AQ14152 1382 aaKnown RBP22.92■■□□□ 1.26
SLC12A4-201ENST00000316341 PCF11O94913 1555 aaKnown RBP22.9■■□□□ 1.26
SLC12A4-201ENST00000316341 ZKSCAN2Q63HK3 967 aa22.9■■□□□ 1.26
SLC12A4-201ENST00000316341 NOL8Q76FK4 1167 aaKnown RBP22.9■■□□□ 1.26
SLC12A4-201ENST00000316341 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.89■■□□□ 1.25
SLC12A4-201ENST00000316341 CALD1Q05682 793 aaKnown RBP22.88■■□□□ 1.25
SLC12A4-201ENST00000316341 DDX11L8A8MPP1 907 aa22.88■■□□□ 1.25
SLC12A4-201ENST00000316341 ANKRD45Q5TZF3 282 aa22.88■■□□□ 1.25
SLC12A4-201ENST00000316341 PPP2R1AP30153 589 aa22.88■■□□□ 1.25
SLC12A4-201ENST00000316341 RSPH4AQ5TD94 716 aa22.87■■□□□ 1.25
SLC12A4-201ENST00000316341 DDX49Q9Y6V7 483 aaKnown RBP22.87■■□□□ 1.25
SLC12A4-201ENST00000316341 PRKCSHP14314 528 aaPredicted RBP22.86■■□□□ 1.25
SLC12A4-201ENST00000316341 MIA2Q96PC5 1412 aa22.86■■□□□ 1.25
SLC12A4-201ENST00000316341 CHMP5Q9NZZ3 219 aa22.85■■□□□ 1.25
SLC12A4-201ENST00000316341 SPAG9O60271 1321 aaKnown RBP22.84■■□□□ 1.25
SLC12A4-201ENST00000316341 NCOA1Q15788 1441 aa22.84■■□□□ 1.25
SLC12A4-201ENST00000316341 AQRO60306 1485 aaKnown RBP eCLIP22.83■■□□□ 1.242e-7■■■■■ 35
SLC12A4-201ENST00000316341 C22orf23Q9BZE7 217 aa22.82■■□□□ 1.24
SLC12A4-201ENST00000316341 TAOK2Q9UL54 1235 aa22.82■■□□□ 1.24
SLC12A4-201ENST00000316341 DZIP1LQ8IYY4 767 aaKnown RBP22.82■■□□□ 1.24
SLC12A4-201ENST00000316341 LNPKQ9C0E8 428 aa22.81■■□□□ 1.24
SLC12A4-201ENST00000316341 KIAA1107Q9UPP5 1409 aa22.81■■□□□ 1.24
SLC12A4-201ENST00000316341 FOXD4L6Q3SYB3 417 aaPredicted RBP22.81■■□□□ 1.24
SLC12A4-201ENST00000316341 FOXD4L3Q6VB84 417 aaPredicted RBP22.81■■□□□ 1.24
SLC12A4-201ENST00000316341 ANKRD30BQ9BXX2 1392 aa22.81■■□□□ 1.24
SLC12A4-201ENST00000316341 OS9Q13438 667 aaPredicted RBP22.8■■□□□ 1.24
SLC12A4-201ENST00000316341 HDGFL2Q7Z4V5 671 aaPredicted RBP22.8■■□□□ 1.24
SLC12A4-201ENST00000316341 PTPRKQ15262 1439 aa22.8■■□□□ 1.24
SLC12A4-201ENST00000316341 KCNJ4P48050 445 aa22.79■■□□□ 1.24
SLC12A4-201ENST00000316341 EFCAB5A4FU69 1503 aa22.79■■□□□ 1.24
SLC12A4-201ENST00000316341 PTMSP20962 102 aa22.79■■□□□ 1.24
SLC12A4-201ENST00000316341 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.78■■□□□ 1.24
SLC12A4-201ENST00000316341 MCCP23508 829 aa22.77■■□□□ 1.24
SLC12A4-201ENST00000316341 PDZRN3Q9UPQ7 1066 aa22.77■■□□□ 1.24
SLC12A4-201ENST00000316341 EHBP1L1Q8N3D4 1523 aa22.77■■□□□ 1.24
SLC12A4-201ENST00000316341 PRDM2Q13029 1718 aa22.75■■□□□ 1.23
SLC12A4-201ENST00000316341 DAPK1P53355 1430 aa22.75■■□□□ 1.23
SLC12A4-201ENST00000316341 TRAK2O60296 914 aa22.74■■□□□ 1.23
SLC12A4-201ENST00000316341 SLC4A10Q6U841 1118 aa22.74■■□□□ 1.23
SLC12A4-201ENST00000316341 TCP11L2Q8N4U5 519 aa22.74■■□□□ 1.23
SLC12A4-201ENST00000316341 RUNDC1Q96C34 613 aa22.74■■□□□ 1.23
SLC12A4-201ENST00000316341 PRG4Q92954 1404 aaPredicted RBP22.73■■□□□ 1.23
SLC12A4-201ENST00000316341 NESP48681 1621 aa22.73■■□□□ 1.23
SLC12A4-201ENST00000316341 GOLGA6L4A6NEF3 574 aa22.73■■□□□ 1.23
SLC12A4-201ENST00000316341 DDX19BQ9UMR2 479 aa22.73■■□□□ 1.23
SLC12A4-201ENST00000316341 MAP3K1Q13233 1512 aa22.72■■□□□ 1.23
SLC12A4-201ENST00000316341 KIAA2012Q0VF49 1180 aa22.72■■□□□ 1.23
SLC12A4-201ENST00000316341 CDK13Q14004 1512 aaKnown RBP22.72■■□□□ 1.23
SLC12A4-201ENST00000316341 POLA1P09884 1462 aaPredicted RBP22.71■■□□□ 1.23
SLC12A4-201ENST00000316341 TRIM6-TRIM34B2RNG4 842 aa22.71■■□□□ 1.23
SLC12A4-201ENST00000316341 CHAF1AQ13111 956 aaPredicted RBP22.71■■□□□ 1.23
SLC12A4-201ENST00000316341 ZRSR1Q15695 479 aaKnown RBP22.7■■□□□ 1.23
SLC12A4-201ENST00000316341 DRC7Q8IY82 874 aa22.7■■□□□ 1.23
SLC12A4-201ENST00000316341 TERF2IPQ9NYB0 399 aa22.69■■□□□ 1.22
SLC12A4-201ENST00000316341 MLECQ14165 292 aa22.69■■□□□ 1.22
SLC12A4-201ENST00000316341 FAM43AQ8N2R8 423 aa22.69■■□□□ 1.22
SLC12A4-201ENST00000316341 CFAP44Q96MT7 982 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms