RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 OS9Q13438 667 aaPredicted RBP16.43■□□□□ 0.22
SH3PXD2A-201ENST00000315994 TROQ12816 1431 aaPredicted RBP16.43■□□□□ 0.22
SH3PXD2A-201ENST00000315994 NGDNQ8NEJ9 315 aaKnown RBP16.42■□□□□ 0.22
SH3PXD2A-201ENST00000315994 PLEKHH2Q8IVE3 1493 aa16.41■□□□□ 0.22
SH3PXD2A-201ENST00000315994 PDE3BQ13370 1112 aa16.4■□□□□ 0.22
SH3PXD2A-201ENST00000315994 GOLGA6L22H0YM25 854 aa16.39■□□□□ 0.21
SH3PXD2A-201ENST00000315994 GOLGA2Q08379 1002 aa16.39■□□□□ 0.21
SH3PXD2A-201ENST00000315994 IQGAP2Q13576 1575 aa16.39■□□□□ 0.21
SH3PXD2A-201ENST00000315994 CSB-PGBD3P0DP91 1061 aa16.38■□□□□ 0.21
SH3PXD2A-201ENST00000315994 NCLP19338 710 aaKnown RBP16.38■□□□□ 0.21
SH3PXD2A-201ENST00000315994 SUPT6HQ7KZ85 1726 aaKnown RBP16.37■□□□□ 0.21
SH3PXD2A-201ENST00000315994 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.37■□□□□ 0.216e-8■□□□□ 8.8
SH3PXD2A-201ENST00000315994 CGNL1Q0VF96 1302 aa16.37■□□□□ 0.21
SH3PXD2A-201ENST00000315994 CHMP4AQ9BY43 222 aa16.37■□□□□ 0.21
SH3PXD2A-201ENST00000315994 PRKRIP1Q9H875 184 aaPredicted RBP16.37■□□□□ 0.21
SH3PXD2A-201ENST00000315994 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.36■□□□□ 0.21
SH3PXD2A-201ENST00000315994 C9orf84Q5VXU9 1444 aa16.36■□□□□ 0.21
SH3PXD2A-201ENST00000315994 LMOD3Q0VAK6 560 aa16.35■□□□□ 0.21
SH3PXD2A-201ENST00000315994 AFAP1Q8N556 730 aa16.35■□□□□ 0.21
SH3PXD2A-201ENST00000315994 CCDC146Q8IYE0 955 aa16.35■□□□□ 0.21
SH3PXD2A-201ENST00000315994 CDK11BP21127 795 aaKnown RBP16.34■□□□□ 0.21
SH3PXD2A-201ENST00000315994 AMPHP49418 695 aa16.34■□□□□ 0.21
SH3PXD2A-201ENST00000315994 BIVM-ERCC5R4GMW8 1640 aa16.33■□□□□ 0.2
SH3PXD2A-201ENST00000315994 EPRSP07814 1512 aaKnown RBP16.33■□□□□ 0.2
SH3PXD2A-201ENST00000315994 CFAP44Q96MT7 982 aa16.32■□□□□ 0.2
SH3PXD2A-201ENST00000315994 MAGI1Q96QZ7 1491 aaPredicted RBP16.32■□□□□ 0.2
SH3PXD2A-201ENST00000315994 NUTM2FA1L443 756 aa16.32■□□□□ 0.2
SH3PXD2A-201ENST00000315994 MINK1Q8N4C8 1332 aaPredicted RBP16.31■□□□□ 0.2
SH3PXD2A-201ENST00000315994 HFM1A2PYH4 1435 aa16.31■□□□□ 0.2
SH3PXD2A-201ENST00000315994 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.31■□□□□ 0.2
SH3PXD2A-201ENST00000315994 ITPRIPQ8IWB1 547 aa16.31■□□□□ 0.2
SH3PXD2A-201ENST00000315994 COG3Q96JB2 828 aa16.31■□□□□ 0.2
SH3PXD2A-201ENST00000315994 URB2Q14146 1524 aaKnown RBP16.31■□□□□ 0.2
SH3PXD2A-201ENST00000315994 AEBP2Q6ZN18 517 aaPredicted RBP16.3■□□□□ 0.2
SH3PXD2A-201ENST00000315994 RWDD1Q9H446 243 aaPredicted RBP16.3■□□□□ 0.2
SH3PXD2A-201ENST00000315994 CENPJQ9HC77 1338 aaPredicted RBP16.3■□□□□ 0.2
SH3PXD2A-201ENST00000315994 DAPK1P53355 1430 aa16.3■□□□□ 0.2
SH3PXD2A-201ENST00000315994 STK31Q9BXU1 1019 aa16.29■□□□□ 0.2
SH3PXD2A-201ENST00000315994 PCF11O94913 1555 aaKnown RBP16.29■□□□□ 0.2
SH3PXD2A-201ENST00000315994 SMC4Q9NTJ3 1288 aa16.29■□□□□ 0.2
SH3PXD2A-201ENST00000315994 CCDC7Q96M83 1385 aa16.29■□□□□ 0.2
SH3PXD2A-201ENST00000315994 GRIN2AQ12879 1464 aa16.29■□□□□ 0.2
SH3PXD2A-201ENST00000315994 CDK13Q14004 1512 aaKnown RBP16.28■□□□□ 0.2
SH3PXD2A-201ENST00000315994 DNAJC5BQ9UF47 199 aa16.28■□□□□ 0.2
SH3PXD2A-201ENST00000315994 KIAA1107Q9UPP5 1409 aa16.27■□□□□ 0.19
SH3PXD2A-201ENST00000315994 PMFBP1Q8TBY8 1022 aa16.27■□□□□ 0.19
SH3PXD2A-201ENST00000315994 KIF7Q2M1P5 1343 aa16.26■□□□□ 0.19
SH3PXD2A-201ENST00000315994 KCNJ4P48050 445 aa16.26■□□□□ 0.19
SH3PXD2A-201ENST00000315994 HSP90AB1P08238 724 aaKnown RBP16.25■□□□□ 0.19
SH3PXD2A-201ENST00000315994 NOP58Q9Y2X3 529 aaKnown RBP16.25■□□□□ 0.19
SH3PXD2A-201ENST00000315994 CNTLNQ9NXG0 1405 aa16.24■□□□□ 0.19
SH3PXD2A-201ENST00000315994 ZBED9Q6R2W3 1325 aa16.23■□□□□ 0.19
SH3PXD2A-201ENST00000315994 MCCP23508 829 aa16.23■□□□□ 0.19
SH3PXD2A-201ENST00000315994 MAP3K1Q13233 1512 aa16.23■□□□□ 0.19
SH3PXD2A-201ENST00000315994 SCAPERQ9BY12 1400 aa16.23■□□□□ 0.19
SH3PXD2A-201ENST00000315994 LTV1Q96GA3 475 aaPredicted RBP16.23■□□□□ 0.19
SH3PXD2A-201ENST00000315994 HSCBQ8IWL3 235 aa16.22■□□□□ 0.19
SH3PXD2A-201ENST00000315994 TCERG1O14776 1098 aaKnown RBP16.22■□□□□ 0.19
SH3PXD2A-201ENST00000315994 CCDC9Q9Y3X0 531 aaKnown RBP16.22■□□□□ 0.19
SH3PXD2A-201ENST00000315994 ROCK1Q13464 1354 aa16.22■□□□□ 0.19
SH3PXD2A-201ENST00000315994 FGD1P98174 961 aa16.21■□□□□ 0.19
SH3PXD2A-201ENST00000315994 E9PSI1 815 aa16.21■□□□□ 0.19
SH3PXD2A-201ENST00000315994 HDAC5Q9UQL6 1122 aa16.21■□□□□ 0.19
SH3PXD2A-201ENST00000315994 RRP7AQ9Y3A4 280 aaKnown RBP16.21■□□□□ 0.19
SH3PXD2A-201ENST00000315994 TSHZ2Q9NRE2 1034 aa16.2■□□□□ 0.18
SH3PXD2A-201ENST00000315994 NGEFQ8N5V2 710 aa16.2■□□□□ 0.18
SH3PXD2A-201ENST00000315994 DEKP35659 375 aaKnown RBP16.19■□□□□ 0.18
SH3PXD2A-201ENST00000315994 APBB1O00213 710 aa16.18■□□□□ 0.18
SH3PXD2A-201ENST00000315994 HMMRO75330 724 aa16.18■□□□□ 0.18
SH3PXD2A-201ENST00000315994 DIAPH1O60610 1272 aaKnown RBP16.18■□□□□ 0.18
SH3PXD2A-201ENST00000315994 ZRSR1Q15695 479 aaKnown RBP16.17■□□□□ 0.18
SH3PXD2A-201ENST00000315994 PLB1Q6P1J6 1458 aa16.17■□□□□ 0.18
SH3PXD2A-201ENST00000315994 KIF14Q15058 1648 aa16.17■□□□□ 0.18
SH3PXD2A-201ENST00000315994 ARHGEF11O15085 1522 aa16.17■□□□□ 0.18
SH3PXD2A-201ENST00000315994 CCDC141Q6ZP82 1450 aa16.17■□□□□ 0.18
SH3PXD2A-201ENST00000315994 CLUAP1Q96AJ1 413 aa16.17■□□□□ 0.18
SH3PXD2A-201ENST00000315994 RBM19Q9Y4C8 960 aaKnown RBP16.16■□□□□ 0.18
SH3PXD2A-201ENST00000315994 ZNF330Q9Y3S2 320 aaPredicted RBP16.16■□□□□ 0.18
SH3PXD2A-201ENST00000315994 ZNF608Q9ULD9 1512 aaPredicted RBP16.15■□□□□ 0.18
SH3PXD2A-201ENST00000315994 CFAP70Q5T0N1 1121 aa16.15■□□□□ 0.18
SH3PXD2A-201ENST00000315994 WASHC2AQ641Q2 1341 aa16.15■□□□□ 0.18
SH3PXD2A-201ENST00000315994 CAMSAP2Q08AD1 1489 aa16.15■□□□□ 0.18
SH3PXD2A-201ENST00000315994 TMEM132EQ6IEE7 984 aa16.15■□□□□ 0.18
SH3PXD2A-201ENST00000315994 TMX4Q9H1E5 349 aaPredicted RBP16.15■□□□□ 0.18
SH3PXD2A-201ENST00000315994 PTPN23Q9H3S7 1636 aa16.15■□□□□ 0.18
SH3PXD2A-201ENST00000315994 TRIM44Q96DX7 344 aaPredicted RBP16.14■□□□□ 0.18
SH3PXD2A-201ENST00000315994 NAIPQ13075 1403 aa16.14■□□□□ 0.18
SH3PXD2A-201ENST00000315994 APAF1O14727 1248 aa16.14■□□□□ 0.17
SH3PXD2A-201ENST00000315994 SLC4A10Q6U841 1118 aa16.14■□□□□ 0.17
SH3PXD2A-201ENST00000315994 RTN4Q9NQC3 1192 aaKnown RBP16.14■□□□□ 0.17
SH3PXD2A-201ENST00000315994 KIAA1211Q6ZU35 1233 aa16.13■□□□□ 0.17
SH3PXD2A-201ENST00000315994 C1orf141Q5JVX7 400 aa16.12■□□□□ 0.17
SH3PXD2A-201ENST00000315994 SLC52A1Q9NWF4 448 aa16.12■□□□□ 0.17
SH3PXD2A-201ENST00000315994 PSME1Q06323 249 aa16.12■□□□□ 0.17
SH3PXD2A-201ENST00000315994 CABP2Q9NPB3 220 aa16.12■□□□□ 0.17
SH3PXD2A-201ENST00000315994 NAP1L2Q9ULW6 460 aaPredicted RBP16.11■□□□□ 0.17
SH3PXD2A-201ENST00000315994 RRP1P56182 461 aaKnown RBP16.11■□□□□ 0.17
SH3PXD2A-201ENST00000315994 RUNDC1Q96C34 613 aa16.11■□□□□ 0.17
SH3PXD2A-201ENST00000315994 RAPGEF3O95398 923 aa16.1■□□□□ 0.17
SH3PXD2A-201ENST00000315994 BRD4O60885 1362 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms