RNA–Protein interactions for RNA: ENST00000311191.10

LRCH1-201, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH1, Length 4,710 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-201ENST00000311191 MORC1Q86VD1 984 aa23.65■■□□□ 1.38
LRCH1-201ENST00000311191 PSME1Q06323 249 aa23.65■■□□□ 1.38
LRCH1-201ENST00000311191 DAXXQ9UER7 740 aaPredicted RBP23.65■■□□□ 1.38
LRCH1-201ENST00000311191 ATP10BO94823 1461 aa23.64■■□□□ 1.38
LRCH1-201ENST00000311191 TARBP1Q13395 1621 aaKnown RBP23.64■■□□□ 1.37
LRCH1-201ENST00000311191 TIAM1Q13009 1591 aa23.64■■□□□ 1.37
LRCH1-201ENST00000311191 TRAK1Q9UPV9 953 aa23.63■■□□□ 1.37
LRCH1-201ENST00000311191 ZNF518AQ6AHZ1 1483 aa23.63■■□□□ 1.37
LRCH1-201ENST00000311191 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.62■■□□□ 1.37
LRCH1-201ENST00000311191 EVA1CP58658 441 aa23.61■■□□□ 1.37
LRCH1-201ENST00000311191 SOX12O15370 315 aa23.6■■□□□ 1.37
LRCH1-201ENST00000311191 MAP3K1Q13233 1512 aa23.59■■□□□ 1.37
LRCH1-201ENST00000311191 MRS2Q9HD23 443 aa23.59■■□□□ 1.37
LRCH1-201ENST00000311191 ARXQ96QS3 562 aa23.58■■□□□ 1.37
LRCH1-201ENST00000311191 CTTNBP2Q8WZ74 1663 aa23.58■■□□□ 1.36
LRCH1-201ENST00000311191 ERICH6Q7L0X2 663 aa23.57■■□□□ 1.36
LRCH1-201ENST00000311191 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.57■■□□□ 1.361e-9■■■■■ 51.3
LRCH1-201ENST00000311191 GPRASP1Q5JY77 1395 aa23.56■■□□□ 1.36
LRCH1-201ENST00000311191 CNTLNQ9NXG0 1405 aa23.55■■□□□ 1.36
LRCH1-201ENST00000311191 ABCC10Q5T3U5 1492 aa23.55■■□□□ 1.36
LRCH1-201ENST00000311191 DAPK1P53355 1430 aa23.55■■□□□ 1.36
LRCH1-201ENST00000311191 DHX29Q7Z478 1369 aaKnown RBP23.54■■□□□ 1.36
LRCH1-201ENST00000311191 AMPHP49418 695 aa23.54■■□□□ 1.36
LRCH1-201ENST00000311191 ROCK1Q13464 1354 aa23.54■■□□□ 1.36
LRCH1-201ENST00000311191 PCF11O94913 1555 aaKnown RBP23.53■■□□□ 1.36
LRCH1-201ENST00000311191 RTF1Q92541 710 aaKnown RBP23.52■■□□□ 1.36
LRCH1-201ENST00000311191 U2SURPO15042 1029 aaKnown RBP23.51■■□□□ 1.35
LRCH1-201ENST00000311191 CAMSAP2Q08AD1 1489 aa23.51■■□□□ 1.35
LRCH1-201ENST00000311191 L3MBTL2Q969R5 705 aa23.51■■□□□ 1.35
LRCH1-201ENST00000311191 KIAA1107Q9UPP5 1409 aa23.51■■□□□ 1.35
LRCH1-201ENST00000311191 HMGB2P26583 209 aaKnown RBP23.5■■□□□ 1.35
LRCH1-201ENST00000311191 FAM9BQ8IZU0 186 aa23.49■■□□□ 1.35
LRCH1-201ENST00000311191 NUTM2FA1L443 756 aa23.49■■□□□ 1.35
LRCH1-201ENST00000311191 ANKRD30BQ9BXX2 1392 aa23.49■■□□□ 1.35
LRCH1-201ENST00000311191 UHRF1BP1LA0JNW5 1464 aa23.49■■□□□ 1.35
LRCH1-201ENST00000311191 NEO1Q92859 1461 aa23.49■■□□□ 1.35
LRCH1-201ENST00000311191 TNRQ92752 1358 aa23.48■■□□□ 1.35
LRCH1-201ENST00000311191 COG3Q96JB2 828 aa23.46■■□□□ 1.35
LRCH1-201ENST00000311191 MINK1Q8N4C8 1332 aaPredicted RBP23.46■■□□□ 1.35
LRCH1-201ENST00000311191 NUP153P49790 1475 aaKnown RBP23.46■■□□□ 1.35
LRCH1-201ENST00000311191 TNNT2P45379 298 aaPredicted RBP23.45■■□□□ 1.35
LRCH1-201ENST00000311191 CALD1Q05682 793 aaKnown RBP23.45■■□□□ 1.34
LRCH1-201ENST00000311191 TOM1O60784 492 aa23.44■■□□□ 1.34
LRCH1-201ENST00000311191 CENPJQ9HC77 1338 aaPredicted RBP23.44■■□□□ 1.34
LRCH1-201ENST00000311191 FAM135AQ9P2D6 1515 aa23.42■■□□□ 1.34
LRCH1-201ENST00000311191 MYH16Q9H6N6 1097 aa23.42■■□□□ 1.34
LRCH1-201ENST00000311191 A2MP01023 1474 aa23.41■■□□□ 1.34
LRCH1-201ENST00000311191 DCAF8L1A6NGE4 600 aa23.4■■□□□ 1.34
LRCH1-201ENST00000311191 HIRIP3Q9BW71 556 aaPredicted RBP23.4■■□□□ 1.34
LRCH1-201ENST00000311191 TMX4Q9H1E5 349 aaPredicted RBP23.4■■□□□ 1.34
LRCH1-201ENST00000311191 SF3B2Q13435 895 aaKnown RBP23.39■■□□□ 1.33
LRCH1-201ENST00000311191 KTN1Q86UP2 1357 aaKnown RBP23.38■■□□□ 1.33
LRCH1-201ENST00000311191 PIP4K2BP78356 416 aa23.38■■□□□ 1.33
LRCH1-201ENST00000311191 DISP1Q96F81 1524 aa23.37■■□□□ 1.33
LRCH1-201ENST00000311191 CFAP74Q9C0B2 1584 aa23.37■■□□□ 1.33
LRCH1-201ENST00000311191 ESCO1Q5FWF5 840 aa23.37■■□□□ 1.33
LRCH1-201ENST00000311191 ITSN2Q9NZM3 1697 aa23.36■■□□□ 1.33
LRCH1-201ENST00000311191 CHD1O14646 1710 aa23.36■■□□□ 1.33
LRCH1-201ENST00000311191 CC2D1BQ5T0F9 858 aaKnown RBP23.36■■□□□ 1.33
LRCH1-201ENST00000311191 GPATCH8Q9UKJ3 1502 aaKnown RBP23.35■■□□□ 1.33
LRCH1-201ENST00000311191 ATP10AO60312 1499 aa23.35■■□□□ 1.33
LRCH1-201ENST00000311191 HSPA5P11021 654 aaKnown RBP23.35■■□□□ 1.33
LRCH1-201ENST00000311191 CEBPAP49715 358 aaPredicted RBP23.35■■□□□ 1.33
LRCH1-201ENST00000311191 CHMP4BQ9H444 224 aaKnown RBP23.35■■□□□ 1.33
LRCH1-201ENST00000311191 HNRNPUQ00839 825 aaKnown RBP eCLIP23.34■■□□□ 1.33
LRCH1-201ENST00000311191 CGNL1Q0VF96 1302 aa23.34■■□□□ 1.33
LRCH1-201ENST00000311191 SLC26A8Q96RN1 970 aa23.34■■□□□ 1.33
LRCH1-201ENST00000311191 UHRF1BP1Q6BDS2 1440 aa23.33■■□□□ 1.32
LRCH1-201ENST00000311191 RTEL1-TNFRSF6BF6WH68 1400 aa23.32■■□□□ 1.32
LRCH1-201ENST00000311191 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.31■■□□□ 1.322e-7■□□□□ 10
LRCH1-201ENST00000311191 LMOD3Q0VAK6 560 aa23.3■■□□□ 1.32
LRCH1-201ENST00000311191 LRPPRCP42704 1394 aaKnown RBP23.3■■□□□ 1.32
LRCH1-201ENST00000311191 SALL2Q9Y467 1007 aaPredicted RBP23.3■■□□□ 1.32
LRCH1-201ENST00000311191 ERBINQ96RT1 1412 aa23.29■■□□□ 1.32
LRCH1-201ENST00000311191 CADPS2Q86UW7 1296 aa23.29■■□□□ 1.32
LRCH1-201ENST00000311191 RALBP1Q15311 655 aa23.28■■□□□ 1.32
LRCH1-201ENST00000311191 KDM5BQ9UGL1 1544 aa23.28■■□□□ 1.32
LRCH1-201ENST00000311191 ZNF692Q9BU19 519 aaPredicted RBP23.27■■□□□ 1.32
LRCH1-201ENST00000311191 DUOX2Q9NRD8 1548 aa23.26■■□□□ 1.31
LRCH1-201ENST00000311191 ABCC5O15440 1437 aa23.26■■□□□ 1.31
LRCH1-201ENST00000311191 MS4A1P11836 297 aa23.26■■□□□ 1.31
LRCH1-201ENST00000311191 BCL11AQ9H165 835 aa23.25■■□□□ 1.31
LRCH1-201ENST00000311191 PTPN23Q9H3S7 1636 aa23.25■■□□□ 1.31
LRCH1-201ENST00000311191 LAS1LQ9Y4W2 734 aaKnown RBP23.25■■□□□ 1.31
LRCH1-201ENST00000311191 UBAP1LF5GYI3 381 aa23.24■■□□□ 1.31
LRCH1-201ENST00000311191 C1orf141Q5JVX7 400 aa23.24■■□□□ 1.31
LRCH1-201ENST00000311191 MSH6P52701 1360 aa23.24■■□□□ 1.31
LRCH1-201ENST00000311191 NLRP13Q86W25 1043 aa23.23■■□□□ 1.31
LRCH1-201ENST00000311191 LTV1Q96GA3 475 aaPredicted RBP23.22■■□□□ 1.31
LRCH1-201ENST00000311191 MAGI2Q86UL8 1455 aa23.21■■□□□ 1.31
LRCH1-201ENST00000311191 U2AF1L5P0DN76 240 aaPredicted RBP23.2■■□□□ 1.31
LRCH1-201ENST00000311191 U2AF1Q01081 240 aaKnown RBP eCLIP23.2■■□□□ 1.31
LRCH1-201ENST00000311191 RAPGEF4Q8WZA2 1011 aa23.19■■□□□ 1.3
LRCH1-201ENST00000311191 FBXO31Q5XUX0 539 aaPredicted RBP23.19■■□□□ 1.3
LRCH1-201ENST00000311191 NCOA1Q15788 1441 aa23.18■■□□□ 1.3
LRCH1-201ENST00000311191 NLRP6P59044 892 aa23.18■■□□□ 1.3
LRCH1-201ENST00000311191 PRAM1Q96QH2 718 aa23.18■■□□□ 1.3
LRCH1-201ENST00000311191 ZFYVE16Q7Z3T8 1539 aa23.18■■□□□ 1.3
LRCH1-201ENST00000311191 ST20-MTHFSA0A0A6YYL1 179 aa23.18■■□□□ 1.3
LRCH1-201ENST00000311191 HDAC5Q9UQL6 1122 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms