RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 ROCK2O75116 1388 aaKnown RBP20.84■□□□□ 0.93
SPIRE1-201ENST00000309836 PLA2R1Q13018 1463 aa20.83■□□□□ 0.93
SPIRE1-201ENST00000309836 DCAF11Q8TEB1 546 aa20.83■□□□□ 0.92
SPIRE1-201ENST00000309836 TRPM1Q7Z4N2 1603 aa20.82■□□□□ 0.92
SPIRE1-201ENST00000309836 PLEKHH2Q8IVE3 1493 aa20.81■□□□□ 0.92
SPIRE1-201ENST00000309836 IQGAP3Q86VI3 1631 aa20.81■□□□□ 0.92
SPIRE1-201ENST00000309836 E9PCH4 1651 aa20.81■□□□□ 0.92
SPIRE1-201ENST00000309836 PRAG1Q86YV5 1406 aa20.8■□□□□ 0.92
SPIRE1-201ENST00000309836 ST20-MTHFSA0A0A6YYL1 179 aa20.79■□□□□ 0.92
SPIRE1-201ENST00000309836 ERICH6BQ5W0A0 696 aa20.79■□□□□ 0.92
SPIRE1-201ENST00000309836 CCDC144AA2RUR9 1427 aa20.79■□□□□ 0.92
SPIRE1-201ENST00000309836 CNGB1Q14028 1251 aaPredicted RBP20.78■□□□□ 0.92
SPIRE1-201ENST00000309836 ZCCHC11Q5TAX3 1644 aaKnown RBP20.78■□□□□ 0.92
SPIRE1-201ENST00000309836 RBM19Q9Y4C8 960 aaKnown RBP20.77■□□□□ 0.92
SPIRE1-201ENST00000309836 CLASP1Q7Z460 1538 aa20.76■□□□□ 0.91
SPIRE1-201ENST00000309836 DUOX2Q9NRD8 1548 aa20.76■□□□□ 0.91
SPIRE1-201ENST00000309836 A2MP01023 1474 aa20.76■□□□□ 0.91
SPIRE1-201ENST00000309836 MAGI2Q86UL8 1455 aa20.76■□□□□ 0.91
SPIRE1-201ENST00000309836 PLCH2O75038 1416 aa20.74■□□□□ 0.91
SPIRE1-201ENST00000309836 SMG6Q86US8 1419 aaKnown RBP20.74■□□□□ 0.91
SPIRE1-201ENST00000309836 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.73■□□□□ 0.91
SPIRE1-201ENST00000309836 PPP4R2Q9NY27 417 aa20.73■□□□□ 0.91
SPIRE1-201ENST00000309836 UHRF1BP1LA0JNW5 1464 aa20.73■□□□□ 0.91
SPIRE1-201ENST00000309836 LAMC1P11047 1609 aa20.72■□□□□ 0.91
SPIRE1-201ENST00000309836 GPRASP1Q5JY77 1395 aa20.72■□□□□ 0.91
SPIRE1-201ENST00000309836 ABCC1P33527 1531 aa20.72■□□□□ 0.91
SPIRE1-201ENST00000309836 ERBINQ96RT1 1412 aa20.72■□□□□ 0.91
SPIRE1-201ENST00000309836 PNISRQ8TF01 805 aaKnown RBP20.71■□□□□ 0.91
SPIRE1-201ENST00000309836 ATP10AO60312 1499 aa20.7■□□□□ 0.9
SPIRE1-201ENST00000309836 PRDM15P57071 1507 aaPredicted RBP20.69■□□□□ 0.9
SPIRE1-201ENST00000309836 NBPF1Q3BBV0 1214 aa20.69■□□□□ 0.9
SPIRE1-201ENST00000309836 RGL3Q3MIN7 710 aa20.69■□□□□ 0.9
SPIRE1-201ENST00000309836 LRPPRCP42704 1394 aaKnown RBP20.66■□□□□ 0.9
SPIRE1-201ENST00000309836 KTN1Q86UP2 1357 aaKnown RBP20.66■□□□□ 0.9
SPIRE1-201ENST00000309836 TRAPPC8Q9Y2L5 1435 aa20.66■□□□□ 0.9
SPIRE1-201ENST00000309836 EIF2AK4Q9P2K8 1649 aaKnown RBP20.66■□□□□ 0.9
SPIRE1-201ENST00000309836 EFCAB2Q5VUJ9 269 aa20.65■□□□□ 0.9
SPIRE1-201ENST00000309836 MYBBP1AQ9BQG0 1328 aaKnown RBP20.65■□□□□ 0.9
SPIRE1-201ENST00000309836 BRD4O60885 1362 aaPredicted RBP20.65■□□□□ 0.9
SPIRE1-201ENST00000309836 COL17A1Q9UMD9 1497 aaPredicted RBP20.65■□□□□ 0.9
SPIRE1-201ENST00000309836 TMC1Q8TDI8 760 aa20.64■□□□□ 0.9
SPIRE1-201ENST00000309836 NUDCQ9Y266 331 aa20.64■□□□□ 0.9
SPIRE1-201ENST00000309836 RALBP1Q15311 655 aa20.64■□□□□ 0.89
SPIRE1-201ENST00000309836 RNF17Q9BXT8 1623 aaKnown RBP20.62■□□□□ 0.89
SPIRE1-201ENST00000309836 ANP32EQ9BTT0 268 aa20.62■□□□□ 0.89
SPIRE1-201ENST00000309836 RNF123Q5XPI4 1314 aa20.61■□□□□ 0.89
SPIRE1-201ENST00000309836 PARD3Q8TEW0 1356 aa20.6■□□□□ 0.89
SPIRE1-201ENST00000309836 TESK2Q96S53 571 aa20.6■□□□□ 0.89
SPIRE1-201ENST00000309836 DISP3Q9P2K9 1392 aa20.59■□□□□ 0.89
SPIRE1-201ENST00000309836 ZFYVE16Q7Z3T8 1539 aa20.59■□□□□ 0.89
SPIRE1-201ENST00000309836 ARAP3Q8WWN8 1544 aa20.59■□□□□ 0.89
SPIRE1-201ENST00000309836 B4GALNT3Q6L9W6 998 aa20.59■□□□□ 0.89
SPIRE1-201ENST00000309836 SENP3-EIF4A1A0A087X0R7 540 aa20.58■□□□□ 0.88
SPIRE1-201ENST00000309836 PER1O15534 1290 aaPredicted RBP20.56■□□□□ 0.88
SPIRE1-201ENST00000309836 RTEL1-TNFRSF6BF6WH68 1400 aa20.55■□□□□ 0.88
SPIRE1-201ENST00000309836 MADDQ8WXG6 1647 aa20.55■□□□□ 0.88
SPIRE1-201ENST00000309836 DEPDC5O75140 1603 aa20.54■□□□□ 0.88
SPIRE1-201ENST00000309836 SPAG9O60271 1321 aaKnown RBP20.54■□□□□ 0.88
SPIRE1-201ENST00000309836 TRPM2O94759 1503 aa20.54■□□□□ 0.88
SPIRE1-201ENST00000309836 NLRP13Q86W25 1043 aa20.52■□□□□ 0.88
SPIRE1-201ENST00000309836 AFAP1Q8N556 730 aa20.52■□□□□ 0.87
SPIRE1-201ENST00000309836 CEP152O94986 1710 aa20.51■□□□□ 0.87
SPIRE1-201ENST00000309836 SPHKAPQ2M3C7 1700 aa20.51■□□□□ 0.87
SPIRE1-201ENST00000309836 ABCA9Q8IUA7 1624 aa20.51■□□□□ 0.87
SPIRE1-201ENST00000309836 INO80Q9ULG1 1556 aaPredicted RBP20.51■□□□□ 0.87
SPIRE1-201ENST00000309836 IQGAP1P46940 1657 aa20.5■□□□□ 0.87
SPIRE1-201ENST00000309836 CLTCL1P53675 1640 aa20.5■□□□□ 0.87
SPIRE1-201ENST00000309836 PTPRTO14522 1441 aa20.5■□□□□ 0.87
SPIRE1-201ENST00000309836 WDR7Q9Y4E6 1490 aa20.5■□□□□ 0.87
SPIRE1-201ENST00000309836 FANCIQ9NVI1 1328 aa20.49■□□□□ 0.87
SPIRE1-201ENST00000309836 MSH5O43196 834 aa20.49■□□□□ 0.87
SPIRE1-201ENST00000309836 TET3O43151 1660 aa20.48■□□□□ 0.87
SPIRE1-201ENST00000309836 ATP7AQ04656 1500 aa20.47■□□□□ 0.87
SPIRE1-201ENST00000309836 VWDEQ8N2E2 1590 aa20.47■□□□□ 0.87
SPIRE1-201ENST00000309836 PANK3Q9H999 370 aa20.47■□□□□ 0.87
SPIRE1-201ENST00000309836 WASHC2CQ9Y4E1 1318 aa20.47■□□□□ 0.87
SPIRE1-201ENST00000309836 TMF1P82094 1093 aa20.46■□□□□ 0.87
SPIRE1-201ENST00000309836 FANCAO15360 1455 aa20.44■□□□□ 0.86
SPIRE1-201ENST00000309836 CC2D1BQ5T0F9 858 aaKnown RBP20.43■□□□□ 0.86
SPIRE1-201ENST00000309836 MROH1Q8NDA8 1641 aa20.41■□□□□ 0.86
SPIRE1-201ENST00000309836 BLMP54132 1417 aaPredicted RBP20.41■□□□□ 0.86
SPIRE1-201ENST00000309836 SCAPERQ9BY12 1400 aa20.41■□□□□ 0.86
SPIRE1-201ENST00000309836 INSRP06213 1382 aa20.4■□□□□ 0.86
SPIRE1-201ENST00000309836 ZMYM4Q5VZL5 1548 aa20.4■□□□□ 0.86
SPIRE1-201ENST00000309836 SCAF11Q99590 1463 aaKnown RBP20.38■□□□□ 0.85
SPIRE1-201ENST00000309836 ADGRL1O94910 1474 aa20.38■□□□□ 0.85
SPIRE1-201ENST00000309836 KANK1Q14678 1352 aa20.37■□□□□ 0.85
SPIRE1-201ENST00000309836 NEURL4Q96JN8 1562 aa20.37■□□□□ 0.85
SPIRE1-201ENST00000309836 RRP1P56182 461 aaKnown RBP20.37■□□□□ 0.85
SPIRE1-201ENST00000309836 CCDC136Q96JN2 1154 aa20.37■□□□□ 0.85
SPIRE1-201ENST00000309836 SYNMO15061 1565 aa20.36■□□□□ 0.85
SPIRE1-201ENST00000309836 KIAA1210Q9ULL0 1709 aa20.36■□□□□ 0.85
SPIRE1-201ENST00000309836 PDE3BQ13370 1112 aa20.36■□□□□ 0.85
SPIRE1-201ENST00000309836 SALL2Q9Y467 1007 aaPredicted RBP20.36■□□□□ 0.85
SPIRE1-201ENST00000309836 STAC3Q96MF2 364 aa20.35■□□□□ 0.85
SPIRE1-201ENST00000309836 MYOM1P52179 1685 aa20.34■□□□□ 0.85
SPIRE1-201ENST00000309836 ASXL2Q76L83 1435 aa20.34■□□□□ 0.85
SPIRE1-201ENST00000309836 KIF3BO15066 747 aa20.34■□□□□ 0.85
SPIRE1-201ENST00000309836 UGGT1Q9NYU2 1555 aa20.33■□□□□ 0.85
SPIRE1-201ENST00000309836 RCAN3Q9UKA8 241 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms