RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 DHX29Q7Z478 1369 aaKnown RBP15.69■□□□□ 0.1
PTPN2-201ENST00000309660 RALGAPBQ86X10 1494 aa15.69■□□□□ 0.1
PTPN2-201ENST00000309660 ZBED9Q6R2W3 1325 aa15.68■□□□□ 0.1
PTPN2-201ENST00000309660 SPAG9O60271 1321 aaKnown RBP15.68■□□□□ 0.1
PTPN2-201ENST00000309660 UHRF1BP1Q6BDS2 1440 aa15.67■□□□□ 0.1
PTPN2-201ENST00000309660 KDM5CP41229 1560 aa15.66■□□□□ 0.1
PTPN2-201ENST00000309660 ARHGEF12Q9NZN5 1544 aa15.66■□□□□ 0.1
PTPN2-201ENST00000309660 TRAPPC8Q9Y2L5 1435 aa15.65■□□□□ 0.1
PTPN2-201ENST00000309660 KDM5DQ9BY66 1539 aa15.64■□□□□ 0.1
PTPN2-201ENST00000309660 CC2D1BQ5T0F9 858 aaKnown RBP15.64■□□□□ 0.09
PTPN2-201ENST00000309660 B4GALNT3Q6L9W6 998 aa15.64■□□□□ 0.09
PTPN2-201ENST00000309660 PLCH2O75038 1416 aa15.64■□□□□ 0.09
PTPN2-201ENST00000309660 ARID4BQ4LE39 1312 aaPredicted RBP15.63■□□□□ 0.09
PTPN2-201ENST00000309660 SHROOM2Q13796 1616 aa15.62■□□□□ 0.09
PTPN2-201ENST00000309660 PLA2R1Q13018 1463 aa15.62■□□□□ 0.09
PTPN2-201ENST00000309660 MYO5CQ9NQX4 1742 aa15.61■□□□□ 0.09
PTPN2-201ENST00000309660 KIF3BO15066 747 aa15.61■□□□□ 0.09
PTPN2-201ENST00000309660 RBM19Q9Y4C8 960 aaKnown RBP15.61■□□□□ 0.09
PTPN2-201ENST00000309660 PRAG1Q86YV5 1406 aa15.61■□□□□ 0.09
PTPN2-201ENST00000309660 PNISRQ8TF01 805 aaKnown RBP15.6■□□□□ 0.09
PTPN2-201ENST00000309660 A2MP01023 1474 aa15.59■□□□□ 0.09
PTPN2-201ENST00000309660 ZCCHC11Q5TAX3 1644 aaKnown RBP15.59■□□□□ 0.09
PTPN2-201ENST00000309660 PPP4R2Q9NY27 417 aa15.58■□□□□ 0.08
PTPN2-201ENST00000309660 MYBBP1AQ9BQG0 1328 aaKnown RBP15.57■□□□□ 0.08
PTPN2-201ENST00000309660 DUOX2Q9NRD8 1548 aa15.57■□□□□ 0.08
PTPN2-201ENST00000309660 POLR1AO95602 1720 aaPredicted RBP15.57■□□□□ 0.08
PTPN2-201ENST00000309660 PANK3Q9H999 370 aa15.56■□□□□ 0.08
PTPN2-201ENST00000309660 RALBP1Q15311 655 aa15.56■□□□□ 0.08
PTPN2-201ENST00000309660 TMF1P82094 1093 aa15.56■□□□□ 0.08
PTPN2-201ENST00000309660 KTN1Q86UP2 1357 aaKnown RBP15.55■□□□□ 0.08
PTPN2-201ENST00000309660 DISP3Q9P2K9 1392 aa15.55■□□□□ 0.08
PTPN2-201ENST00000309660 CHGAP10645 457 aaKnown RBP15.55■□□□□ 0.08
PTPN2-201ENST00000309660 NUDCQ9Y266 331 aa15.55■□□□□ 0.08
PTPN2-201ENST00000309660 SCAPERQ9BY12 1400 aa15.54■□□□□ 0.08
PTPN2-201ENST00000309660 NPM1P06748 294 aaKnown RBP eCLIP15.54■□□□□ 0.08
PTPN2-201ENST00000309660 ERBINQ96RT1 1412 aa15.53■□□□□ 0.08
PTPN2-201ENST00000309660 TESK2Q96S53 571 aa15.53■□□□□ 0.08
PTPN2-201ENST00000309660 MAST1Q9Y2H9 1570 aa15.53■□□□□ 0.08
PTPN2-201ENST00000309660 NLRP13Q86W25 1043 aa15.52■□□□□ 0.08
PTPN2-201ENST00000309660 CLASP1Q7Z460 1538 aa15.52■□□□□ 0.07
PTPN2-201ENST00000309660 UNC13BO14795 1591 aa15.52■□□□□ 0.07
PTPN2-201ENST00000309660 ABCC1P33527 1531 aa15.51■□□□□ 0.07
PTPN2-201ENST00000309660 FANCAO15360 1455 aa15.51■□□□□ 0.07
PTPN2-201ENST00000309660 PLXNC1O60486 1568 aa15.5■□□□□ 0.07
PTPN2-201ENST00000309660 KANK1Q14678 1352 aa15.5■□□□□ 0.07
PTPN2-201ENST00000309660 UHRF1BP1LA0JNW5 1464 aa15.49■□□□□ 0.07
PTPN2-201ENST00000309660 SENP3Q9H4L4 574 aaPredicted RBP15.49■□□□□ 0.07
PTPN2-201ENST00000309660 BRD4O60885 1362 aaPredicted RBP15.49■□□□□ 0.07
PTPN2-201ENST00000309660 IQGAP3Q86VI3 1631 aa15.49■□□□□ 0.07
PTPN2-201ENST00000309660 WDR7Q9Y4E6 1490 aa15.48■□□□□ 0.07
PTPN2-201ENST00000309660 PER1O15534 1290 aaPredicted RBP15.48■□□□□ 0.07
PTPN2-201ENST00000309660 GGT6Q6P531 493 aa15.48■□□□□ 0.07
PTPN2-201ENST00000309660 TRPM1Q7Z4N2 1603 aa15.48■□□□□ 0.07
PTPN2-201ENST00000309660 CCDC136Q96JN2 1154 aa15.48■□□□□ 0.07
PTPN2-201ENST00000309660 ERICH6BQ5W0A0 696 aa15.47■□□□□ 0.07
PTPN2-201ENST00000309660 SMG6Q86US8 1419 aaKnown RBP15.47■□□□□ 0.07
PTPN2-201ENST00000309660 ADGRL1O94910 1474 aa15.47■□□□□ 0.07
PTPN2-201ENST00000309660 KNSTRNQ9Y448 316 aa15.47■□□□□ 0.07
PTPN2-201ENST00000309660 GPRASP1Q5JY77 1395 aa15.46■□□□□ 0.07
PTPN2-201ENST00000309660 CFAP70Q5T0N1 1121 aa15.45■□□□□ 0.06
PTPN2-201ENST00000309660 ASXL2Q76L83 1435 aa15.45■□□□□ 0.06
PTPN2-201ENST00000309660 COL17A1Q9UMD9 1497 aaPredicted RBP15.43■□□□□ 0.06
PTPN2-201ENST00000309660 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
PTPN2-201ENST00000309660 CDCA7LQ96GN5 454 aa15.43■□□□□ 0.06
PTPN2-201ENST00000309660 PARD3Q8TEW0 1356 aa15.43■□□□□ 0.06
PTPN2-201ENST00000309660 ZFYVE16Q7Z3T8 1539 aa15.42■□□□□ 0.06
PTPN2-201ENST00000309660 ATP10AO60312 1499 aa15.42■□□□□ 0.06
PTPN2-201ENST00000309660 MAGI2Q86UL8 1455 aa15.41■□□□□ 0.06
PTPN2-201ENST00000309660 RTEL1-TNFRSF6BF6WH68 1400 aa15.41■□□□□ 0.06
PTPN2-201ENST00000309660 LRPPRCP42704 1394 aaKnown RBP15.41■□□□□ 0.06
PTPN2-201ENST00000309660 ATP7AQ04656 1500 aa15.4■□□□□ 0.06
PTPN2-201ENST00000309660 PRDM15P57071 1507 aaPredicted RBP15.4■□□□□ 0.06
PTPN2-201ENST00000309660 NUTM2DQ5VT03 806 aaPredicted RBP15.4■□□□□ 0.06
PTPN2-201ENST00000309660 ADGRF5Q8IZF2 1346 aa15.39■□□□□ 0.05
PTPN2-201ENST00000309660 RCAN3Q9UKA8 241 aa15.39■□□□□ 0.05
PTPN2-201ENST00000309660 WDR43Q15061 677 aaKnown RBP eCLIP15.38■□□□□ 0.05
PTPN2-201ENST00000309660 ANP32EQ9BTT0 268 aa15.38■□□□□ 0.05
PTPN2-201ENST00000309660 E9PCH4 1651 aa15.38■□□□□ 0.05
PTPN2-201ENST00000309660 CDCA8Q53HL2 280 aa15.38■□□□□ 0.05
PTPN2-201ENST00000309660 UGGT1Q9NYU2 1555 aa15.38■□□□□ 0.05
PTPN2-201ENST00000309660 EIF2AK4Q9P2K8 1649 aaKnown RBP15.38■□□□□ 0.05
PTPN2-201ENST00000309660 MYT1Q01538 1121 aa15.37■□□□□ 0.05
PTPN2-201ENST00000309660 ERICH6Q7L0X2 663 aa15.37■□□□□ 0.05
PTPN2-201ENST00000309660 ADAMTS8Q9UP79 889 aa15.37■□□□□ 0.05
PTPN2-201ENST00000309660 RAPGEF3O95398 923 aa15.36■□□□□ 0.05
PTPN2-201ENST00000309660 PLIN1O60240 522 aa15.36■□□□□ 0.05
PTPN2-201ENST00000309660 TRAK1Q9UPV9 953 aa15.35■□□□□ 0.05
PTPN2-201ENST00000309660 EXOC6Q8TAG9 804 aa15.35■□□□□ 0.05
PTPN2-201ENST00000309660 RRP1P56182 461 aaKnown RBP15.34■□□□□ 0.05
PTPN2-201ENST00000309660 WASHC2CQ9Y4E1 1318 aa15.34■□□□□ 0.05
PTPN2-201ENST00000309660 PPP2R1AP30153 589 aa15.34■□□□□ 0.05
PTPN2-201ENST00000309660 CLTCL1P53675 1640 aa15.34■□□□□ 0.05
PTPN2-201ENST00000309660 TRPM2O94759 1503 aa15.34■□□□□ 0.05
PTPN2-201ENST00000309660 SCAF11Q99590 1463 aaKnown RBP15.33■□□□□ 0.05
PTPN2-201ENST00000309660 CD109Q6YHK3 1445 aa15.33■□□□□ 0.04
PTPN2-201ENST00000309660 TNNT2P45379 298 aaPredicted RBP15.33■□□□□ 0.04
PTPN2-201ENST00000309660 TMEM132EQ6IEE7 984 aa15.33■□□□□ 0.04
PTPN2-201ENST00000309660 CCDC146Q8IYE0 955 aa15.33■□□□□ 0.04
PTPN2-201ENST00000309660 PTPRTO14522 1441 aa15.32■□□□□ 0.04
PTPN2-201ENST00000309660 EIF3AQ14152 1382 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms