RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 FBXO31Q5XUX0 539 aaPredicted RBP11.82□□□□□ -0.52
LCLAT1-201ENST00000309052 IRX6P78412 446 aaPredicted RBP11.81□□□□□ -0.52
LCLAT1-201ENST00000309052 CFAP70Q5T0N1 1121 aa11.81□□□□□ -0.52
LCLAT1-201ENST00000309052 ARHGEF12Q9NZN5 1544 aa11.8□□□□□ -0.52
LCLAT1-201ENST00000309052 MBD5Q9P267 1494 aa11.79□□□□□ -0.52
LCLAT1-201ENST00000309052 NUTM2FA1L443 756 aa11.79□□□□□ -0.52
LCLAT1-201ENST00000309052 USP47Q96K76 1375 aa11.79□□□□□ -0.52
LCLAT1-201ENST00000309052 CEBPAP49715 358 aaPredicted RBP11.78□□□□□ -0.52
LCLAT1-201ENST00000309052 CCDC184Q52MB2 194 aa11.78□□□□□ -0.52
LCLAT1-201ENST00000309052 DNMT1P26358 1616 aaKnown RBP11.77□□□□□ -0.52
LCLAT1-201ENST00000309052 ZCCHC11Q5TAX3 1644 aaKnown RBP11.77□□□□□ -0.52
LCLAT1-201ENST00000309052 CLASP1Q7Z460 1538 aa11.77□□□□□ -0.53
LCLAT1-201ENST00000309052 KIF7Q2M1P5 1343 aa11.77□□□□□ -0.53
LCLAT1-201ENST00000309052 KDM5BQ9UGL1 1544 aa11.77□□□□□ -0.53
LCLAT1-201ENST00000309052 CDC42BPAQ5VT25 1732 aa11.76□□□□□ -0.53
LCLAT1-201ENST00000309052 PZPP20742 1482 aa11.76□□□□□ -0.53
LCLAT1-201ENST00000309052 SAMD9LQ8IVG5 1584 aa11.76□□□□□ -0.53
LCLAT1-201ENST00000309052 ITSN2Q9NZM3 1697 aa11.76□□□□□ -0.53
LCLAT1-201ENST00000309052 ADCY10Q96PN6 1610 aa11.74□□□□□ -0.53
LCLAT1-201ENST00000309052 DENND4BO75064 1496 aaPredicted RBP11.73□□□□□ -0.53
LCLAT1-201ENST00000309052 NEFLP07196 543 aa11.72□□□□□ -0.53
LCLAT1-201ENST00000309052 TSPOAP1O95153 1857 aa11.72□□□□□ -0.53
LCLAT1-201ENST00000309052 POGKQ9P215 609 aa11.71□□□□□ -0.53
LCLAT1-201ENST00000309052 RPRD2Q5VT52 1461 aaKnown RBP11.71□□□□□ -0.53
LCLAT1-201ENST00000309052 ADGRF5Q8IZF2 1346 aa11.71□□□□□ -0.53
LCLAT1-201ENST00000309052 IDI1Q13907 227 aa11.71□□□□□ -0.54
LCLAT1-201ENST00000309052 CDC42BPBQ9Y5S2 1711 aa11.69□□□□□ -0.54
LCLAT1-201ENST00000309052 TMF1P82094 1093 aa11.69□□□□□ -0.54
LCLAT1-201ENST00000309052 SOX12O15370 315 aa11.69□□□□□ -0.54
LCLAT1-201ENST00000309052 PANK3Q9H999 370 aa11.69□□□□□ -0.54
LCLAT1-201ENST00000309052 DHX29Q7Z478 1369 aaKnown RBP11.69□□□□□ -0.54
LCLAT1-201ENST00000309052 SRPK2P78362 688 aaKnown RBP11.68□□□□□ -0.54
LCLAT1-201ENST00000309052 FKBP8Q14318 412 aa11.68□□□□□ -0.54
LCLAT1-201ENST00000309052 CCDC7Q96M83 1385 aa11.68□□□□□ -0.54
LCLAT1-201ENST00000309052 YEATS2Q9ULM3 1422 aa11.68□□□□□ -0.54
LCLAT1-201ENST00000309052 PPM1GO15355 546 aaPredicted RBP11.68□□□□□ -0.54
LCLAT1-201ENST00000309052 FAM135AQ9P2D6 1515 aa11.68□□□□□ -0.54
LCLAT1-201ENST00000309052 MINK1Q8N4C8 1332 aaPredicted RBP11.68□□□□□ -0.54
LCLAT1-201ENST00000309052 SHROOM2Q13796 1616 aa11.68□□□□□ -0.54
LCLAT1-201ENST00000309052 KNSTRNQ9Y448 316 aa11.67□□□□□ -0.54
LCLAT1-201ENST00000309052 PRKRIP1Q9H875 184 aaPredicted RBP11.67□□□□□ -0.54
LCLAT1-201ENST00000309052 MYO5CQ9NQX4 1742 aa11.67□□□□□ -0.54
LCLAT1-201ENST00000309052 UHRF1BP1LA0JNW5 1464 aa11.66□□□□□ -0.54
LCLAT1-201ENST00000309052 RBM33Q96EV2 1170 aaKnown RBP11.66□□□□□ -0.54
LCLAT1-201ENST00000309052 NEUROD2Q15784 382 aa11.65□□□□□ -0.54
LCLAT1-201ENST00000309052 ERBINQ96RT1 1412 aa11.64□□□□□ -0.55
LCLAT1-201ENST00000309052 PREX2Q70Z35 1606 aa11.64□□□□□ -0.55
LCLAT1-201ENST00000309052 ADGRL2O95490 1459 aa11.64□□□□□ -0.55
LCLAT1-201ENST00000309052 SLC26A8Q96RN1 970 aa11.63□□□□□ -0.55
LCLAT1-201ENST00000309052 A2MP01023 1474 aa11.63□□□□□ -0.55
LCLAT1-201ENST00000309052 SUPT16HQ9Y5B9 1047 aaKnown RBP11.63□□□□□ -0.55
LCLAT1-201ENST00000309052 CABP2Q9NPB3 220 aa11.62□□□□□ -0.55
LCLAT1-201ENST00000309052 ZNF518AQ6AHZ1 1483 aa11.62□□□□□ -0.55
LCLAT1-201ENST00000309052 UGGT1Q9NYU2 1555 aa11.62□□□□□ -0.55
LCLAT1-201ENST00000309052 GCC2Q8IWJ2 1684 aa11.62□□□□□ -0.55
LCLAT1-201ENST00000309052 SLC12A5Q9H2X9 1139 aa11.61□□□□□ -0.55
LCLAT1-201ENST00000309052 ATP7AQ04656 1500 aa11.61□□□□□ -0.55
LCLAT1-201ENST00000309052 DUOX2Q9NRD8 1548 aa11.61□□□□□ -0.55
LCLAT1-201ENST00000309052 SHANK2Q9UPX8 1470 aa11.6□□□□□ -0.55
LCLAT1-201ENST00000309052 C14orf37Q86TY3 774 aa11.6□□□□□ -0.55
LCLAT1-201ENST00000309052 VGFO15240 615 aaPredicted RBP11.6□□□□□ -0.55
LCLAT1-201ENST00000309052 ABCC1P33527 1531 aa11.6□□□□□ -0.55
LCLAT1-201ENST00000309052 WAPLQ7Z5K2 1190 aa11.59□□□□□ -0.55
LCLAT1-201ENST00000309052 ZBTB7CA1YPR0 619 aa11.59□□□□□ -0.55
LCLAT1-201ENST00000309052 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.59□□□□□ -0.551e-6■□□□□ 10.6
LCLAT1-201ENST00000309052 PLA2R1Q13018 1463 aa11.58□□□□□ -0.56
LCLAT1-201ENST00000309052 TXNDC2Q86VQ3 553 aa11.58□□□□□ -0.56
LCLAT1-201ENST00000309052 TEX14Q8IWB6 1497 aa11.58□□□□□ -0.56
LCLAT1-201ENST00000309052 RIMBP3CA6NJZ7 1639 aa11.57□□□□□ -0.56
LCLAT1-201ENST00000309052 RIMBP3BA6NNM3 1639 aa11.57□□□□□ -0.56
LCLAT1-201ENST00000309052 RIMBP3Q9UFD9 1639 aa11.57□□□□□ -0.56
LCLAT1-201ENST00000309052 NOS1P29475 1434 aa11.57□□□□□ -0.56
LCLAT1-201ENST00000309052 CCDC146Q8IYE0 955 aa11.57□□□□□ -0.56
LCLAT1-201ENST00000309052 PRAM1Q96QH2 718 aa11.56□□□□□ -0.56
LCLAT1-201ENST00000309052 POGZQ7Z3K3 1410 aa11.56□□□□□ -0.56
LCLAT1-201ENST00000309052 WDR43Q15061 677 aaKnown RBP eCLIP11.56□□□□□ -0.56
LCLAT1-201ENST00000309052 BCL11AQ9H165 835 aa11.56□□□□□ -0.56
LCLAT1-201ENST00000309052 DISP3Q9P2K9 1392 aa11.55□□□□□ -0.56
LCLAT1-201ENST00000309052 ARHGEF5Q12774 1597 aa11.55□□□□□ -0.56
LCLAT1-201ENST00000309052 CCER2I3L3R5 266 aa11.55□□□□□ -0.56
LCLAT1-201ENST00000309052 CENPJQ9HC77 1338 aaPredicted RBP11.55□□□□□ -0.56
LCLAT1-201ENST00000309052 LMOD2Q6P5Q4 547 aa11.55□□□□□ -0.56
LCLAT1-201ENST00000309052 ADGBQ8N7X0 1667 aa11.54□□□□□ -0.56
LCLAT1-201ENST00000309052 FBLN1P23142 703 aa11.54□□□□□ -0.56
LCLAT1-201ENST00000309052 CDCA8Q53HL2 280 aa11.54□□□□□ -0.56
LCLAT1-201ENST00000309052 CNTLNQ9NXG0 1405 aa11.54□□□□□ -0.56
LCLAT1-201ENST00000309052 SLC24A1O60721 1099 aa11.53□□□□□ -0.56
LCLAT1-201ENST00000309052 MORC1Q86VD1 984 aa11.53□□□□□ -0.56
LCLAT1-201ENST00000309052 U2SURPO15042 1029 aaKnown RBP11.52□□□□□ -0.56
LCLAT1-201ENST00000309052 RTEL1-TNFRSF6BF6WH68 1400 aa11.52□□□□□ -0.56
LCLAT1-201ENST00000309052 NPATQ14207 1427 aa11.52□□□□□ -0.57
LCLAT1-201ENST00000309052 GGNBP2Q9H3C7 697 aa11.52□□□□□ -0.57
LCLAT1-201ENST00000309052 TESK2Q96S53 571 aa11.52□□□□□ -0.57
LCLAT1-201ENST00000309052 SLC52A1Q9NWF4 448 aa11.52□□□□□ -0.57
LCLAT1-201ENST00000309052 PRAG1Q86YV5 1406 aa11.52□□□□□ -0.57
LCLAT1-201ENST00000309052 KTN1Q86UP2 1357 aaKnown RBP11.52□□□□□ -0.57
LCLAT1-201ENST00000309052 ZFYVE16Q7Z3T8 1539 aa11.51□□□□□ -0.57
LCLAT1-201ENST00000309052 RRP7AQ9Y3A4 280 aaKnown RBP11.51□□□□□ -0.57
LCLAT1-201ENST00000309052 NCKAP5LQ9HCH0 1330 aa11.5□□□□□ -0.57
LCLAT1-201ENST00000309052 ATP10AO60312 1499 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms