RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 RRP7AQ9Y3A4 280 aaKnown RBP17.16■□□□□ 0.34
SEC23A-201ENST00000307712 PDS5BQ9NTI5 1447 aa17.15■□□□□ 0.34
SEC23A-201ENST00000307712 RWDD1Q9H446 243 aaPredicted RBP17.15■□□□□ 0.34
SEC23A-201ENST00000307712 CCDC144AA2RUR9 1427 aa17.15■□□□□ 0.34
SEC23A-201ENST00000307712 SLC24A1O60721 1099 aa17.15■□□□□ 0.34
SEC23A-201ENST00000307712 MYH16Q9H6N6 1097 aa17.14■□□□□ 0.33
SEC23A-201ENST00000307712 EHBP1L1Q8N3D4 1523 aa17.13■□□□□ 0.33
SEC23A-201ENST00000307712 PMFBP1Q8TBY8 1022 aa17.13■□□□□ 0.33
SEC23A-201ENST00000307712 C20orf194Q5TEA3 1177 aa17.13■□□□□ 0.33
SEC23A-201ENST00000307712 ANKRD50Q9ULJ7 1429 aa17.12■□□□□ 0.33
SEC23A-201ENST00000307712 MAPK8IP3Q9UPT6 1336 aa17.11■□□□□ 0.33
SEC23A-201ENST00000307712 MIA2Q96PC5 1412 aa17.11■□□□□ 0.33
SEC23A-201ENST00000307712 POLA1P09884 1462 aaPredicted RBP17.1■□□□□ 0.33
SEC23A-201ENST00000307712 KIAA1107Q9UPP5 1409 aa17.1■□□□□ 0.33
SEC23A-201ENST00000307712 CGNL1Q0VF96 1302 aa17.1■□□□□ 0.33
SEC23A-201ENST00000307712 E9PSI1 815 aa17.1■□□□□ 0.33
SEC23A-201ENST00000307712 HMGXB3Q12766 1538 aa17.09■□□□□ 0.33
SEC23A-201ENST00000307712 U2AF1L5P0DN76 240 aaPredicted RBP17.09■□□□□ 0.33
SEC23A-201ENST00000307712 U2AF1Q01081 240 aaKnown RBP eCLIP17.09■□□□□ 0.332e-9■■■□□ 16
SEC23A-201ENST00000307712 PANK1Q8TE04 598 aa17.09■□□□□ 0.33
SEC23A-201ENST00000307712 DAPK1P53355 1430 aa17.07■□□□□ 0.32
SEC23A-201ENST00000307712 ITPRIPQ8IWB1 547 aa17.07■□□□□ 0.32
SEC23A-201ENST00000307712 UNC13AQ9UPW8 1703 aa17.07■□□□□ 0.32
SEC23A-201ENST00000307712 SUPT6HQ7KZ85 1726 aaKnown RBP17.07■□□□□ 0.32
SEC23A-201ENST00000307712 RPRD2Q5VT52 1461 aaKnown RBP17.06■□□□□ 0.32
SEC23A-201ENST00000307712 JPH4Q96JJ6 628 aa17.06■□□□□ 0.32
SEC23A-201ENST00000307712 FOXD4L1Q9NU39 408 aa17.06■□□□□ 0.32
SEC23A-201ENST00000307712 BCAR3O75815 825 aa17.06■□□□□ 0.32
SEC23A-201ENST00000307712 CARMIL2Q6F5E8 1435 aa17.06■□□□□ 0.32
SEC23A-201ENST00000307712 SMC4Q9NTJ3 1288 aa17.04■□□□□ 0.32
SEC23A-201ENST00000307712 CDK13Q14004 1512 aaKnown RBP17.04■□□□□ 0.32
SEC23A-201ENST00000307712 TOPBP1Q92547 1522 aa17.04■□□□□ 0.32
SEC23A-201ENST00000307712 PPP2R1AP30153 589 aa17.03■□□□□ 0.32
SEC23A-201ENST00000307712 SAFB2Q14151 953 aaKnown RBP eCLIP17.03■□□□□ 0.32
SEC23A-201ENST00000307712 TPRNQ4KMQ1 711 aa17.03■□□□□ 0.32
SEC23A-201ENST00000307712 NESP48681 1621 aa17.03■□□□□ 0.32
SEC23A-201ENST00000307712 GBP4Q96PP9 640 aa17.02■□□□□ 0.32
SEC23A-201ENST00000307712 PTMAP06454 111 aaKnown RBP17.02■□□□□ 0.31
SEC23A-201ENST00000307712 HSP90AA2PQ14568 343 aaPredicted RBP17.01■□□□□ 0.31
SEC23A-201ENST00000307712 STAG3Q9UJ98 1225 aa17.01■□□□□ 0.31
SEC23A-201ENST00000307712 MSNP26038 577 aaKnown RBP17■□□□□ 0.31
SEC23A-201ENST00000307712 VSIG10Q8N0Z9 540 aa17■□□□□ 0.31
SEC23A-201ENST00000307712 EPRSP07814 1512 aaKnown RBP17■□□□□ 0.31
SEC23A-201ENST00000307712 POGKQ9P215 609 aa17■□□□□ 0.31
SEC23A-201ENST00000307712 ROCK1Q13464 1354 aa17■□□□□ 0.31
SEC23A-201ENST00000307712 ABCC5O15440 1437 aa16.99■□□□□ 0.31
SEC23A-201ENST00000307712 PRG4Q92954 1404 aaPredicted RBP16.99■□□□□ 0.31
SEC23A-201ENST00000307712 RSPH4AQ5TD94 716 aa16.98■□□□□ 0.31
SEC23A-201ENST00000307712 WASHC2CQ9Y4E1 1318 aa16.98■□□□□ 0.31
SEC23A-201ENST00000307712 DNTTIP2Q5QJE6 756 aaKnown RBP16.98■□□□□ 0.31
SEC23A-201ENST00000307712 FAM43AQ8N2R8 423 aa16.98■□□□□ 0.31
SEC23A-201ENST00000307712 ABCA10Q8WWZ4 1543 aa16.98■□□□□ 0.31
SEC23A-201ENST00000307712 CHMP5Q9NZZ3 219 aa16.96■□□□□ 0.31
SEC23A-201ENST00000307712 DHX29Q7Z478 1369 aaKnown RBP16.96■□□□□ 0.31
SEC23A-201ENST00000307712 ARID3AQ99856 593 aa16.95■□□□□ 0.3
SEC23A-201ENST00000307712 RNF123Q5XPI4 1314 aa16.95■□□□□ 0.3
SEC23A-201ENST00000307712 IPO8O15397 1037 aaKnown RBP16.94■□□□□ 0.3
SEC23A-201ENST00000307712 PRDM2Q13029 1718 aa16.94■□□□□ 0.3
SEC23A-201ENST00000307712 DDX11L8A8MPP1 907 aa16.94■□□□□ 0.3
SEC23A-201ENST00000307712 ZBTB7CA1YPR0 619 aa16.93■□□□□ 0.3
SEC23A-201ENST00000307712 ZKSCAN2Q63HK3 967 aa16.93■□□□□ 0.3
SEC23A-201ENST00000307712 TRAK1Q9UPV9 953 aa16.93■□□□□ 0.3
SEC23A-201ENST00000307712 EIF3AQ14152 1382 aaKnown RBP16.93■□□□□ 0.3
SEC23A-201ENST00000307712 APBB1O00213 710 aa16.93■□□□□ 0.3
SEC23A-201ENST00000307712 C22orf23Q9BZE7 217 aa16.93■□□□□ 0.3
SEC23A-201ENST00000307712 SRPK2P78362 688 aaKnown RBP16.92■□□□□ 0.3
SEC23A-201ENST00000307712 PDZRN3Q9UPQ7 1066 aa16.92■□□□□ 0.3
SEC23A-201ENST00000307712 EFCAB2Q5VUJ9 269 aa16.92■□□□□ 0.3
SEC23A-201ENST00000307712 KIF3BO15066 747 aa16.91■□□□□ 0.3
SEC23A-201ENST00000307712 CASC1Q6TDU7 716 aa16.91■□□□□ 0.3
SEC23A-201ENST00000307712 KANK1Q14678 1352 aa16.9■□□□□ 0.3
SEC23A-201ENST00000307712 SLFN5Q08AF3 891 aa16.9■□□□□ 0.3
SEC23A-201ENST00000307712 TRAK2O60296 914 aa16.9■□□□□ 0.3
SEC23A-201ENST00000307712 DUSP27Q5VZP5 1158 aa16.9■□□□□ 0.3
SEC23A-201ENST00000307712 HECW1Q76N89 1606 aa16.9■□□□□ 0.3
SEC23A-201ENST00000307712 PLCB2Q00722 1185 aa16.89■□□□□ 0.3
SEC23A-201ENST00000307712 PDE3AQ14432 1141 aa16.89■□□□□ 0.3
SEC23A-201ENST00000307712 CHMP4BQ9H444 224 aaKnown RBP16.89■□□□□ 0.3
SEC23A-201ENST00000307712 STK26Q9P289 416 aa16.89■□□□□ 0.29
SEC23A-201ENST00000307712 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.29
SEC23A-201ENST00000307712 DZIP1LQ8IYY4 767 aaKnown RBP16.89■□□□□ 0.29
SEC23A-201ENST00000307712 CFAP43Q8NDM7 1665 aa16.88■□□□□ 0.29
SEC23A-201ENST00000307712 C9orf84Q5VXU9 1444 aa16.88■□□□□ 0.29
SEC23A-201ENST00000307712 NGEFQ8N5V2 710 aa16.88■□□□□ 0.29
SEC23A-201ENST00000307712 GRIN2BQ13224 1484 aa16.88■□□□□ 0.29
SEC23A-201ENST00000307712 DDX49Q9Y6V7 483 aaKnown RBP16.87■□□□□ 0.29
SEC23A-201ENST00000307712 TROQ12816 1431 aaPredicted RBP16.87■□□□□ 0.29
SEC23A-201ENST00000307712 TCP11L2Q8N4U5 519 aa16.87■□□□□ 0.29
SEC23A-201ENST00000307712 ERBINQ96RT1 1412 aa16.86■□□□□ 0.29
SEC23A-201ENST00000307712 CALD1Q05682 793 aaKnown RBP16.86■□□□□ 0.29
SEC23A-201ENST00000307712 ANKRD45Q5TZF3 282 aa16.86■□□□□ 0.29
SEC23A-201ENST00000307712 RUNDC1Q96C34 613 aa16.86■□□□□ 0.29
SEC23A-201ENST00000307712 UGGT2Q9NYU1 1516 aa16.86■□□□□ 0.29
SEC23A-201ENST00000307712 LNPKQ9C0E8 428 aa16.85■□□□□ 0.29
SEC23A-201ENST00000307712 SNAPC4Q5SXM2 1469 aa16.85■□□□□ 0.29
SEC23A-201ENST00000307712 SPAG9O60271 1321 aaKnown RBP16.85■□□□□ 0.29
SEC23A-201ENST00000307712 NUTM2DQ5VT03 806 aaPredicted RBP16.85■□□□□ 0.29
SEC23A-201ENST00000307712 ERCC6Q03468 1493 aa16.85■□□□□ 0.29
SEC23A-201ENST00000307712 NPM1P06748 294 aaKnown RBP eCLIP16.85■□□□□ 0.29
SEC23A-201ENST00000307712 MRE11P49959 708 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms