RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 EVC2Q86UK5 1308 aa10.67□□□□□ -0.7
PCDHB1-201ENST00000306549 EPRSP07814 1512 aaKnown RBP10.67□□□□□ -0.7
PCDHB1-201ENST00000306549 URB2Q14146 1524 aaKnown RBP10.67□□□□□ -0.7
PCDHB1-201ENST00000306549 FTSJ3Q8IY81 847 aaKnown RBP10.67□□□□□ -0.7
PCDHB1-201ENST00000306549 PPP6R1Q9UPN7 881 aa10.67□□□□□ -0.7
PCDHB1-201ENST00000306549 TIAM1Q13009 1591 aa10.67□□□□□ -0.7
PCDHB1-201ENST00000306549 RALBP1Q15311 655 aa10.67□□□□□ -0.7
PCDHB1-201ENST00000306549 THEMISQ8N1K5 641 aaPredicted RBP10.66□□□□□ -0.7
PCDHB1-201ENST00000306549 NCOA2Q15596 1464 aa10.66□□□□□ -0.7
PCDHB1-201ENST00000306549 NGDNQ8NEJ9 315 aaKnown RBP10.66□□□□□ -0.7
PCDHB1-201ENST00000306549 SLC52A1Q9NWF4 448 aa10.66□□□□□ -0.7
PCDHB1-201ENST00000306549 HFM1A2PYH4 1435 aa10.65□□□□□ -0.7
PCDHB1-201ENST00000306549 OS9Q13438 667 aaPredicted RBP10.65□□□□□ -0.71
PCDHB1-201ENST00000306549 RAPGEF6Q8TEU7 1601 aa10.65□□□□□ -0.71
PCDHB1-201ENST00000306549 PAK3O75914 559 aaPredicted RBP10.64□□□□□ -0.71
PCDHB1-201ENST00000306549 ANO8Q9HCE9 1232 aaPredicted RBP10.64□□□□□ -0.71
PCDHB1-201ENST00000306549 DHX57Q6P158 1386 aaKnown RBP10.64□□□□□ -0.71
PCDHB1-201ENST00000306549 ANKRD50Q9ULJ7 1429 aa10.64□□□□□ -0.71
PCDHB1-201ENST00000306549 DNTTIP2Q5QJE6 756 aaKnown RBP10.63□□□□□ -0.71
PCDHB1-201ENST00000306549 ATF3P18847 181 aa10.63□□□□□ -0.71
PCDHB1-201ENST00000306549 STK26Q9P289 416 aa10.63□□□□□ -0.71
PCDHB1-201ENST00000306549 KANK4Q5T7N3 995 aaPredicted RBP10.63□□□□□ -0.71
PCDHB1-201ENST00000306549 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.62□□□□□ -0.71
PCDHB1-201ENST00000306549 EIF4G3O43432 1585 aaKnown RBP10.62□□□□□ -0.71
PCDHB1-201ENST00000306549 CSB-PGBD3P0DP91 1061 aa10.62□□□□□ -0.71
PCDHB1-201ENST00000306549 KCNJ4P48050 445 aa10.62□□□□□ -0.71
PCDHB1-201ENST00000306549 C9orf84Q5VXU9 1444 aa10.62□□□□□ -0.71
PCDHB1-201ENST00000306549 NGEFQ8N5V2 710 aa10.62□□□□□ -0.71
PCDHB1-201ENST00000306549 ISY1Q9ULR0 285 aaKnown RBP10.61□□□□□ -0.71
PCDHB1-201ENST00000306549 IPO8O15397 1037 aaKnown RBP10.61□□□□□ -0.71
PCDHB1-201ENST00000306549 DMRT2Q9Y5R5 561 aa10.61□□□□□ -0.71
PCDHB1-201ENST00000306549 CD109Q6YHK3 1445 aa10.61□□□□□ -0.71
PCDHB1-201ENST00000306549 U2SURPO15042 1029 aaKnown RBP10.6□□□□□ -0.71
PCDHB1-201ENST00000306549 CCDC141Q6ZP82 1450 aa10.6□□□□□ -0.71
PCDHB1-201ENST00000306549 CHAF1AQ13111 956 aaPredicted RBP10.6□□□□□ -0.71
PCDHB1-201ENST00000306549 CGNL1Q0VF96 1302 aa10.6□□□□□ -0.71
PCDHB1-201ENST00000306549 KIAA2012Q0VF49 1180 aa10.6□□□□□ -0.71
PCDHB1-201ENST00000306549 ADAMTS12P58397 1594 aa10.6□□□□□ -0.71
PCDHB1-201ENST00000306549 WASHC2AQ641Q2 1341 aa10.59□□□□□ -0.71
PCDHB1-201ENST00000306549 PRM3Q9NNZ6 103 aa10.59□□□□□ -0.71
PCDHB1-201ENST00000306549 NAP1L2Q9ULW6 460 aaPredicted RBP10.58□□□□□ -0.72
PCDHB1-201ENST00000306549 DAPK1P53355 1430 aa10.58□□□□□ -0.72
PCDHB1-201ENST00000306549 PTPN23Q9H3S7 1636 aa10.57□□□□□ -0.72
PCDHB1-201ENST00000306549 AKNAQ7Z591 1439 aa10.57□□□□□ -0.72
PCDHB1-201ENST00000306549 RPGRIP1LQ68CZ1 1315 aa10.57□□□□□ -0.72
PCDHB1-201ENST00000306549 SENP3Q9H4L4 574 aaPredicted RBP10.57□□□□□ -0.72
PCDHB1-201ENST00000306549 NBR1Q14596 966 aa10.57□□□□□ -0.72
PCDHB1-201ENST00000306549 GOLGA6L4A6NEF3 574 aa10.57□□□□□ -0.72
PCDHB1-201ENST00000306549 AMPHP49418 695 aa10.57□□□□□ -0.72
PCDHB1-201ENST00000306549 MYO5CQ9NQX4 1742 aa10.56□□□□□ -0.72
PCDHB1-201ENST00000306549 PSME1Q06323 249 aa10.56□□□□□ -0.72
PCDHB1-201ENST00000306549 LAS1LQ9Y4W2 734 aaKnown RBP10.56□□□□□ -0.72
PCDHB1-201ENST00000306549 KRI1Q8N9T8 703 aaKnown RBP10.56□□□□□ -0.72
PCDHB1-201ENST00000306549 CCER2I3L3R5 266 aa10.56□□□□□ -0.72
PCDHB1-201ENST00000306549 TAOK2Q9UL54 1235 aa10.55□□□□□ -0.72
PCDHB1-201ENST00000306549 EVA1CP58658 441 aa10.55□□□□□ -0.72
PCDHB1-201ENST00000306549 ADGRL1O94910 1474 aa10.55□□□□□ -0.72
PCDHB1-201ENST00000306549 PCF11O94913 1555 aaKnown RBP10.55□□□□□ -0.72
PCDHB1-201ENST00000306549 ROCK1Q13464 1354 aa10.54□□□□□ -0.72
PCDHB1-201ENST00000306549 ANKLE2Q86XL3 938 aa10.54□□□□□ -0.72
PCDHB1-201ENST00000306549 UGGT2Q9NYU1 1516 aa10.54□□□□□ -0.72
PCDHB1-201ENST00000306549 GPRASP1Q5JY77 1395 aa10.54□□□□□ -0.72
PCDHB1-201ENST00000306549 COG3Q96JB2 828 aa10.54□□□□□ -0.72
PCDHB1-201ENST00000306549 CCDC9Q9Y3X0 531 aaKnown RBP10.54□□□□□ -0.72
PCDHB1-201ENST00000306549 ANKRD30BQ9BXX2 1392 aa10.54□□□□□ -0.72
PCDHB1-201ENST00000306549 DENND4BO75064 1496 aaPredicted RBP10.53□□□□□ -0.72
PCDHB1-201ENST00000306549 MEX3CQ5U5Q3 659 aaKnown RBP10.53□□□□□ -0.72
PCDHB1-201ENST00000306549 GNL2Q13823 731 aaKnown RBP10.53□□□□□ -0.72
PCDHB1-201ENST00000306549 MCCP23508 829 aa10.53□□□□□ -0.72
PCDHB1-201ENST00000306549 SAFB2Q14151 953 aaKnown RBP eCLIP10.53□□□□□ -0.72
PCDHB1-201ENST00000306549 SIN3AQ96ST3 1273 aa10.52□□□□□ -0.73
PCDHB1-201ENST00000306549 STK31Q9BXU1 1019 aa10.51□□□□□ -0.73
PCDHB1-201ENST00000306549 ARAP1Q96P48 1450 aa10.51□□□□□ -0.73
PCDHB1-201ENST00000306549 DCAF8L1A6NGE4 600 aa10.51□□□□□ -0.73
PCDHB1-201ENST00000306549 PLCB2Q00722 1185 aa10.51□□□□□ -0.73
PCDHB1-201ENST00000306549 DNAJC5BQ9UF47 199 aa10.51□□□□□ -0.73
PCDHB1-201ENST00000306549 TPRNQ4KMQ1 711 aa10.51□□□□□ -0.73
PCDHB1-201ENST00000306549 FANCAO15360 1455 aa10.5□□□□□ -0.73
PCDHB1-201ENST00000306549 KIAA0556O60303 1618 aa10.5□□□□□ -0.73
PCDHB1-201ENST00000306549 CHD1O14646 1710 aa10.5□□□□□ -0.73
PCDHB1-201ENST00000306549 CC2D1BQ5T0F9 858 aaKnown RBP10.5□□□□□ -0.73
PCDHB1-201ENST00000306549 NLRP13Q86W25 1043 aa10.5□□□□□ -0.73
PCDHB1-201ENST00000306549 WWC1Q8IX03 1113 aa10.5□□□□□ -0.73
PCDHB1-201ENST00000306549 ABCA5Q8WWZ7 1642 aa10.5□□□□□ -0.73
PCDHB1-201ENST00000306549 HSP90B1P14625 803 aaKnown RBP10.5□□□□□ -0.73
PCDHB1-201ENST00000306549 C1orf141Q5JVX7 400 aa10.49□□□□□ -0.73
PCDHB1-201ENST00000306549 G3V3G9 751 aa10.49□□□□□ -0.73
PCDHB1-201ENST00000306549 DCAF8Q5TAQ9 597 aa10.49□□□□□ -0.73
PCDHB1-201ENST00000306549 NOC3LQ8WTT2 800 aaKnown RBP10.49□□□□□ -0.73
PCDHB1-201ENST00000306549 CFAP43Q8NDM7 1665 aa10.49□□□□□ -0.73
PCDHB1-201ENST00000306549 TSPOAP1O95153 1857 aa10.49□□□□□ -0.73
PCDHB1-201ENST00000306549 SMG6Q86US8 1419 aaKnown RBP10.49□□□□□ -0.73
PCDHB1-201ENST00000306549 CCDC34Q96HJ3 373 aa10.49□□□□□ -0.73
PCDHB1-201ENST00000306549 GPATCH3Q96I76 525 aa10.49□□□□□ -0.73
PCDHB1-201ENST00000306549 ZNF518AQ6AHZ1 1483 aa10.48□□□□□ -0.73
PCDHB1-201ENST00000306549 HSP90AB1P08238 724 aaKnown RBP10.48□□□□□ -0.73
PCDHB1-201ENST00000306549 FAM135AQ9P2D6 1515 aa10.48□□□□□ -0.73
PCDHB1-201ENST00000306549 L3MBTL2Q969R5 705 aa10.48□□□□□ -0.73
PCDHB1-201ENST00000306549 U2AF1L5P0DN76 240 aaPredicted RBP10.48□□□□□ -0.73
PCDHB1-201ENST00000306549 U2AF1Q01081 240 aaKnown RBP eCLIP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms