RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 EVC2Q86UK5 1308 aa10.67□□□□□ -0.7
PCDHB1-201ENST00000306549 EPRSP07814 1512 aaKnown RBP10.67□□□□□ -0.7
PCDHB1-201ENST00000306549 URB2Q14146 1524 aaKnown RBP10.67□□□□□ -0.7
PCDHB1-201ENST00000306549 FTSJ3Q8IY81 847 aaKnown RBP10.67□□□□□ -0.7
PCDHB1-201ENST00000306549 PPP6R1Q9UPN7 881 aa10.67□□□□□ -0.7
PCDHB1-201ENST00000306549 TIAM1Q13009 1591 aa10.67□□□□□ -0.7
PCDHB1-201ENST00000306549 RALBP1Q15311 655 aa10.67□□□□□ -0.7
PCDHB1-201ENST00000306549 THEMISQ8N1K5 641 aaPredicted RBP10.66□□□□□ -0.7
PCDHB1-201ENST00000306549 NCOA2Q15596 1464 aa10.66□□□□□ -0.7
PCDHB1-201ENST00000306549 NGDNQ8NEJ9 315 aaKnown RBP10.66□□□□□ -0.7
PCDHB1-201ENST00000306549 SLC52A1Q9NWF4 448 aa10.66□□□□□ -0.7
PCDHB1-201ENST00000306549 HFM1A2PYH4 1435 aa10.65□□□□□ -0.7
PCDHB1-201ENST00000306549 OS9Q13438 667 aaPredicted RBP10.65□□□□□ -0.71
PCDHB1-201ENST00000306549 RAPGEF6Q8TEU7 1601 aa10.65□□□□□ -0.71
PCDHB1-201ENST00000306549 PAK3O75914 559 aaPredicted RBP10.64□□□□□ -0.71
PCDHB1-201ENST00000306549 ANO8Q9HCE9 1232 aaPredicted RBP10.64□□□□□ -0.71
PCDHB1-201ENST00000306549 DHX57Q6P158 1386 aaKnown RBP10.64□□□□□ -0.71
PCDHB1-201ENST00000306549 ANKRD50Q9ULJ7 1429 aa10.64□□□□□ -0.71
PCDHB1-201ENST00000306549 DNTTIP2Q5QJE6 756 aaKnown RBP10.63□□□□□ -0.71
PCDHB1-201ENST00000306549 ATF3P18847 181 aa10.63□□□□□ -0.71
PCDHB1-201ENST00000306549 STK26Q9P289 416 aa10.63□□□□□ -0.71
PCDHB1-201ENST00000306549 KANK4Q5T7N3 995 aaPredicted RBP10.63□□□□□ -0.71
PCDHB1-201ENST00000306549 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.62□□□□□ -0.71
PCDHB1-201ENST00000306549 EIF4G3O43432 1585 aaKnown RBP10.62□□□□□ -0.71
PCDHB1-201ENST00000306549 CSB-PGBD3P0DP91 1061 aa10.62□□□□□ -0.71
PCDHB1-201ENST00000306549 KCNJ4P48050 445 aa10.62□□□□□ -0.71
PCDHB1-201ENST00000306549 C9orf84Q5VXU9 1444 aa10.62□□□□□ -0.71
PCDHB1-201ENST00000306549 NGEFQ8N5V2 710 aa10.62□□□□□ -0.71
PCDHB1-201ENST00000306549 ISY1Q9ULR0 285 aaKnown RBP10.61□□□□□ -0.71
PCDHB1-201ENST00000306549 IPO8O15397 1037 aaKnown RBP10.61□□□□□ -0.71
PCDHB1-201ENST00000306549 DMRT2Q9Y5R5 561 aa10.61□□□□□ -0.71
PCDHB1-201ENST00000306549 CD109Q6YHK3 1445 aa10.61□□□□□ -0.71
PCDHB1-201ENST00000306549 U2SURPO15042 1029 aaKnown RBP10.6□□□□□ -0.71
PCDHB1-201ENST00000306549 CCDC141Q6ZP82 1450 aa10.6□□□□□ -0.71
PCDHB1-201ENST00000306549 CHAF1AQ13111 956 aaPredicted RBP10.6□□□□□ -0.71
PCDHB1-201ENST00000306549 CGNL1Q0VF96 1302 aa10.6□□□□□ -0.71
PCDHB1-201ENST00000306549 KIAA2012Q0VF49 1180 aa10.6□□□□□ -0.71
PCDHB1-201ENST00000306549 ADAMTS12P58397 1594 aa10.6□□□□□ -0.71
PCDHB1-201ENST00000306549 WASHC2AQ641Q2 1341 aa10.59□□□□□ -0.71
PCDHB1-201ENST00000306549 PRM3Q9NNZ6 103 aa10.59□□□□□ -0.71
PCDHB1-201ENST00000306549 NAP1L2Q9ULW6 460 aaPredicted RBP10.58□□□□□ -0.72
PCDHB1-201ENST00000306549 DAPK1P53355 1430 aa10.58□□□□□ -0.72
PCDHB1-201ENST00000306549 PTPN23Q9H3S7 1636 aa10.57□□□□□ -0.72
PCDHB1-201ENST00000306549 AKNAQ7Z591 1439 aa10.57□□□□□ -0.72
PCDHB1-201ENST00000306549 RPGRIP1LQ68CZ1 1315 aa10.57□□□□□ -0.72
PCDHB1-201ENST00000306549 SENP3Q9H4L4 574 aaPredicted RBP10.57□□□□□ -0.72
PCDHB1-201ENST00000306549 NBR1Q14596 966 aa10.57□□□□□ -0.72
PCDHB1-201ENST00000306549 GOLGA6L4A6NEF3 574 aa10.57□□□□□ -0.72
PCDHB1-201ENST00000306549 AMPHP49418 695 aa10.57□□□□□ -0.72
PCDHB1-201ENST00000306549 MYO5CQ9NQX4 1742 aa10.56□□□□□ -0.72
PCDHB1-201ENST00000306549 PSME1Q06323 249 aa10.56□□□□□ -0.72
PCDHB1-201ENST00000306549 LAS1LQ9Y4W2 734 aaKnown RBP10.56□□□□□ -0.72
PCDHB1-201ENST00000306549 KRI1Q8N9T8 703 aaKnown RBP10.56□□□□□ -0.72
PCDHB1-201ENST00000306549 CCER2I3L3R5 266 aa10.56□□□□□ -0.72
PCDHB1-201ENST00000306549 TAOK2Q9UL54 1235 aa10.55□□□□□ -0.72
PCDHB1-201ENST00000306549 EVA1CP58658 441 aa10.55□□□□□ -0.72
PCDHB1-201ENST00000306549 ADGRL1O94910 1474 aa10.55□□□□□ -0.72
PCDHB1-201ENST00000306549 PCF11O94913 1555 aaKnown RBP10.55□□□□□ -0.72
PCDHB1-201ENST00000306549 ROCK1Q13464 1354 aa10.54□□□□□ -0.72
PCDHB1-201ENST00000306549 ANKLE2Q86XL3 938 aa10.54□□□□□ -0.72
PCDHB1-201ENST00000306549 UGGT2Q9NYU1 1516 aa10.54□□□□□ -0.72
PCDHB1-201ENST00000306549 GPRASP1Q5JY77 1395 aa10.54□□□□□ -0.72
PCDHB1-201ENST00000306549 COG3Q96JB2 828 aa10.54□□□□□ -0.72
PCDHB1-201ENST00000306549 CCDC9Q9Y3X0 531 aaKnown RBP10.54□□□□□ -0.72
PCDHB1-201ENST00000306549 ANKRD30BQ9BXX2 1392 aa10.54□□□□□ -0.72
PCDHB1-201ENST00000306549 DENND4BO75064 1496 aaPredicted RBP10.53□□□□□ -0.72
PCDHB1-201ENST00000306549 MEX3CQ5U5Q3 659 aaKnown RBP10.53□□□□□ -0.72
PCDHB1-201ENST00000306549 GNL2Q13823 731 aaKnown RBP10.53□□□□□ -0.72
PCDHB1-201ENST00000306549 MCCP23508 829 aa10.53□□□□□ -0.72
PCDHB1-201ENST00000306549 SAFB2Q14151 953 aaKnown RBP eCLIP10.53□□□□□ -0.72
PCDHB1-201ENST00000306549 SIN3AQ96ST3 1273 aa10.52□□□□□ -0.73
PCDHB1-201ENST00000306549 STK31Q9BXU1 1019 aa10.51□□□□□ -0.73
PCDHB1-201ENST00000306549 ARAP1Q96P48 1450 aa10.51□□□□□ -0.73
PCDHB1-201ENST00000306549 DCAF8L1A6NGE4 600 aa10.51□□□□□ -0.73
PCDHB1-201ENST00000306549 PLCB2Q00722 1185 aa10.51□□□□□ -0.73
PCDHB1-201ENST00000306549 DNAJC5BQ9UF47 199 aa10.51□□□□□ -0.73
PCDHB1-201ENST00000306549 TPRNQ4KMQ1 711 aa10.51□□□□□ -0.73
PCDHB1-201ENST00000306549 FANCAO15360 1455 aa10.5□□□□□ -0.73
PCDHB1-201ENST00000306549 KIAA0556O60303 1618 aa10.5□□□□□ -0.73
PCDHB1-201ENST00000306549 CHD1O14646 1710 aa10.5□□□□□ -0.73
PCDHB1-201ENST00000306549 CC2D1BQ5T0F9 858 aaKnown RBP10.5□□□□□ -0.73
PCDHB1-201ENST00000306549 NLRP13Q86W25 1043 aa10.5□□□□□ -0.73
PCDHB1-201ENST00000306549 WWC1Q8IX03 1113 aa10.5□□□□□ -0.73
PCDHB1-201ENST00000306549 ABCA5Q8WWZ7 1642 aa10.5□□□□□ -0.73
PCDHB1-201ENST00000306549 HSP90B1P14625 803 aaKnown RBP10.5□□□□□ -0.73
PCDHB1-201ENST00000306549 C1orf141Q5JVX7 400 aa10.49□□□□□ -0.73
PCDHB1-201ENST00000306549 G3V3G9 751 aa10.49□□□□□ -0.73
PCDHB1-201ENST00000306549 DCAF8Q5TAQ9 597 aa10.49□□□□□ -0.73
PCDHB1-201ENST00000306549 NOC3LQ8WTT2 800 aaKnown RBP10.49□□□□□ -0.73
PCDHB1-201ENST00000306549 CFAP43Q8NDM7 1665 aa10.49□□□□□ -0.73
PCDHB1-201ENST00000306549 TSPOAP1O95153 1857 aa10.49□□□□□ -0.73
PCDHB1-201ENST00000306549 SMG6Q86US8 1419 aaKnown RBP10.49□□□□□ -0.73
PCDHB1-201ENST00000306549 CCDC34Q96HJ3 373 aa10.49□□□□□ -0.73
PCDHB1-201ENST00000306549 GPATCH3Q96I76 525 aa10.49□□□□□ -0.73
PCDHB1-201ENST00000306549 ZNF518AQ6AHZ1 1483 aa10.48□□□□□ -0.73
PCDHB1-201ENST00000306549 HSP90AB1P08238 724 aaKnown RBP10.48□□□□□ -0.73
PCDHB1-201ENST00000306549 FAM135AQ9P2D6 1515 aa10.48□□□□□ -0.73
PCDHB1-201ENST00000306549 L3MBTL2Q969R5 705 aa10.48□□□□□ -0.73
PCDHB1-201ENST00000306549 U2AF1L5P0DN76 240 aaPredicted RBP10.48□□□□□ -0.73
PCDHB1-201ENST00000306549 U2AF1Q01081 240 aaKnown RBP eCLIP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms