RNA–Protein interactions for RNA: ENST00000305921.7

PPM1D-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1D, Length 4,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1D-201ENST00000305921 CFTRP13569 1480 aa20.79■□□□□ 0.92
PPM1D-201ENST00000305921 DNTTIP2Q5QJE6 756 aaKnown RBP20.78■□□□□ 0.92
PPM1D-201ENST00000305921 KIAA1211Q6ZU35 1233 aa20.78■□□□□ 0.92
PPM1D-201ENST00000305921 TAOK2Q9UL54 1235 aa20.78■□□□□ 0.92
PPM1D-201ENST00000305921 CGNL1Q0VF96 1302 aa20.78■□□□□ 0.92
PPM1D-201ENST00000305921 NUTM2FA1L443 756 aa20.77■□□□□ 0.92
PPM1D-201ENST00000305921 SPRYD3Q8NCJ5 442 aa20.77■□□□□ 0.92
PPM1D-201ENST00000305921 HMMRO75330 724 aa20.76■□□□□ 0.91
PPM1D-201ENST00000305921 HDAC5Q9UQL6 1122 aa20.76■□□□□ 0.91
PPM1D-201ENST00000305921 ERICH3Q5RHP9 1530 aa20.76■□□□□ 0.91
PPM1D-201ENST00000305921 ZBED9Q6R2W3 1325 aa20.76■□□□□ 0.91
PPM1D-201ENST00000305921 STAC3Q96MF2 364 aa20.75■□□□□ 0.91
PPM1D-201ENST00000305921 FYCO1Q9BQS8 1478 aa20.74■□□□□ 0.91
PPM1D-201ENST00000305921 RRP7AQ9Y3A4 280 aaKnown RBP20.74■□□□□ 0.91
PPM1D-201ENST00000305921 GRIN2BQ13224 1484 aa20.73■□□□□ 0.91
PPM1D-201ENST00000305921 NCOA2Q15596 1464 aa20.73■□□□□ 0.91
PPM1D-201ENST00000305921 ANKRD50Q9ULJ7 1429 aa20.73■□□□□ 0.91
PPM1D-201ENST00000305921 TSHZ2Q9NRE2 1034 aa20.72■□□□□ 0.91
PPM1D-201ENST00000305921 ARAP1Q96P48 1450 aa20.72■□□□□ 0.91
PPM1D-201ENST00000305921 ZNF330Q9Y3S2 320 aaPredicted RBP20.7■□□□□ 0.9
PPM1D-201ENST00000305921 E9PSI1 815 aa20.7■□□□□ 0.9
PPM1D-201ENST00000305921 COG3Q96JB2 828 aa20.7■□□□□ 0.9
PPM1D-201ENST00000305921 SLC4A10Q6U841 1118 aa20.7■□□□□ 0.9
PPM1D-201ENST00000305921 MINK1Q8N4C8 1332 aaPredicted RBP20.69■□□□□ 0.9
PPM1D-201ENST00000305921 LTV1Q96GA3 475 aaPredicted RBP20.69■□□□□ 0.9
PPM1D-201ENST00000305921 SYNJ1O43426 1573 aa20.69■□□□□ 0.9
PPM1D-201ENST00000305921 L1TD1Q5T7N2 865 aaKnown RBP20.68■□□□□ 0.9
PPM1D-201ENST00000305921 GBP4Q96PP9 640 aa20.68■□□□□ 0.9
PPM1D-201ENST00000305921 SLKQ9H2G2 1235 aaPredicted RBP20.68■□□□□ 0.9
PPM1D-201ENST00000305921 MFAP1P55081 439 aaKnown RBP20.67■□□□□ 0.9
PPM1D-201ENST00000305921 NRDCO43847 1150 aa20.66■□□□□ 0.9
PPM1D-201ENST00000305921 CCDC7Q96M83 1385 aa20.66■□□□□ 0.9
PPM1D-201ENST00000305921 GOLGA6L6A8MZA4 724 aa20.66■□□□□ 0.9
PPM1D-201ENST00000305921 NGEFQ8N5V2 710 aa20.66■□□□□ 0.9
PPM1D-201ENST00000305921 APAF1O14727 1248 aa20.65■□□□□ 0.9
PPM1D-201ENST00000305921 KIF7Q2M1P5 1343 aa20.65■□□□□ 0.9
PPM1D-201ENST00000305921 PRXQ9BXM0 1461 aa20.64■□□□□ 0.89
PPM1D-201ENST00000305921 IPO9Q96P70 1041 aaKnown RBP20.64■□□□□ 0.89
PPM1D-201ENST00000305921 RRP1P56182 461 aaKnown RBP20.64■□□□□ 0.89
PPM1D-201ENST00000305921 RRBP1Q9P2E9 1410 aaKnown RBP20.63■□□□□ 0.89
PPM1D-201ENST00000305921 GPATCH3Q96I76 525 aa20.62■□□□□ 0.89
PPM1D-201ENST00000305921 CENPQQ7L2Z9 268 aaPredicted RBP20.62■□□□□ 0.89
PPM1D-201ENST00000305921 BCL2L13Q9BXK5 485 aa20.62■□□□□ 0.89
PPM1D-201ENST00000305921 DEKP35659 375 aaKnown RBP20.62■□□□□ 0.89
PPM1D-201ENST00000305921 ZKSCAN2Q63HK3 967 aa20.61■□□□□ 0.89
PPM1D-201ENST00000305921 TRIM6-TRIM34B2RNG4 842 aa20.61■□□□□ 0.89
PPM1D-201ENST00000305921 PTMSP20962 102 aa20.61■□□□□ 0.89
PPM1D-201ENST00000305921 ELL2O00472 640 aaPredicted RBP20.61■□□□□ 0.89
PPM1D-201ENST00000305921 NAP1L5Q96NT1 182 aaPredicted RBP20.61■□□□□ 0.89
PPM1D-201ENST00000305921 MIA2Q96PC5 1412 aa20.6■□□□□ 0.89
PPM1D-201ENST00000305921 PLIN1O60240 522 aa20.6■□□□□ 0.89
PPM1D-201ENST00000305921 RTN4Q9NQC3 1192 aaKnown RBP20.6■□□□□ 0.89
PPM1D-201ENST00000305921 PRDM2Q13029 1718 aa20.6■□□□□ 0.89
PPM1D-201ENST00000305921 GORABQ5T7V8 394 aa20.59■□□□□ 0.89
PPM1D-201ENST00000305921 FAM69CQ0P6D2 419 aa20.59■□□□□ 0.89
PPM1D-201ENST00000305921 EXOC6Q8TAG9 804 aa20.58■□□□□ 0.89
PPM1D-201ENST00000305921 CHMP3Q9Y3E7 222 aa20.58■□□□□ 0.89
PPM1D-201ENST00000305921 DIAPH1O60610 1272 aaKnown RBP20.58■□□□□ 0.88
PPM1D-201ENST00000305921 NESP48681 1621 aa20.58■□□□□ 0.88
PPM1D-201ENST00000305921 SYNJ2O15056 1496 aa20.57■□□□□ 0.88
PPM1D-201ENST00000305921 AFAP1Q8N556 730 aa20.57■□□□□ 0.88
PPM1D-201ENST00000305921 EFCAB5A4FU69 1503 aa20.57■□□□□ 0.88
PPM1D-201ENST00000305921 HMGXB3Q12766 1538 aa20.57■□□□□ 0.88
PPM1D-201ENST00000305921 TAF7LQ5H9L4 462 aa20.56■□□□□ 0.88
PPM1D-201ENST00000305921 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.56■□□□□ 0.88
PPM1D-201ENST00000305921 CNTLNQ9NXG0 1405 aa20.55■□□□□ 0.88
PPM1D-201ENST00000305921 GNL2Q13823 731 aaKnown RBP20.55■□□□□ 0.88
PPM1D-201ENST00000305921 TOP2BQ02880 1626 aa20.55■□□□□ 0.88
PPM1D-201ENST00000305921 CRBNQ96SW2 442 aa20.55■□□□□ 0.88
PPM1D-201ENST00000305921 TOPBP1Q92547 1522 aa20.55■□□□□ 0.88
PPM1D-201ENST00000305921 COG6Q9Y2V7 657 aa20.54■□□□□ 0.88
PPM1D-201ENST00000305921 PRG4Q92954 1404 aaPredicted RBP20.54■□□□□ 0.88
PPM1D-201ENST00000305921 TULP1O00294 542 aaPredicted RBP20.54■□□□□ 0.88
PPM1D-201ENST00000305921 CCDC9Q9Y3X0 531 aaKnown RBP20.53■□□□□ 0.88
PPM1D-201ENST00000305921 MRC2Q9UBG0 1479 aa20.53■□□□□ 0.88
PPM1D-201ENST00000305921 POLA1P09884 1462 aaPredicted RBP20.53■□□□□ 0.88
PPM1D-201ENST00000305921 MSNP26038 577 aaKnown RBP20.52■□□□□ 0.88
PPM1D-201ENST00000305921 TEFQ10587 303 aa20.52■□□□□ 0.88
PPM1D-201ENST00000305921 IFT140Q96RY7 1462 aa20.52■□□□□ 0.87
PPM1D-201ENST00000305921 WASHC2AQ641Q2 1341 aa20.52■□□□□ 0.87
PPM1D-201ENST00000305921 ARHGAP5Q13017 1502 aa20.52■□□□□ 0.87
PPM1D-201ENST00000305921 HTATSF1O43719 755 aaKnown RBP20.51■□□□□ 0.87
PPM1D-201ENST00000305921 FAM161AQ3B820 660 aa20.51■□□□□ 0.87
PPM1D-201ENST00000305921 PDE4AP27815 886 aa20.51■□□□□ 0.87
PPM1D-201ENST00000305921 GZF1Q9H116 711 aaPredicted RBP20.5■□□□□ 0.87
PPM1D-201ENST00000305921 C1orf141Q5JVX7 400 aa20.5■□□□□ 0.87
PPM1D-201ENST00000305921 RUNDC1Q96C34 613 aa20.5■□□□□ 0.87
PPM1D-201ENST00000305921 RIPK4P57078 832 aa20.5■□□□□ 0.87
PPM1D-201ENST00000305921 ANKRD45Q5TZF3 282 aa20.49■□□□□ 0.87
PPM1D-201ENST00000305921 SYAP1Q96A49 352 aaPredicted RBP20.48■□□□□ 0.87
PPM1D-201ENST00000305921 CHAF1AQ13111 956 aaPredicted RBP20.48■□□□□ 0.87
PPM1D-201ENST00000305921 ISY1Q9ULR0 285 aaKnown RBP20.48■□□□□ 0.87
PPM1D-201ENST00000305921 DDX19BQ9UMR2 479 aa20.48■□□□□ 0.87
PPM1D-201ENST00000305921 ST18O60284 1047 aa20.47■□□□□ 0.87
PPM1D-201ENST00000305921 HFM1A2PYH4 1435 aa20.47■□□□□ 0.87
PPM1D-201ENST00000305921 TROQ12816 1431 aaPredicted RBP20.47■□□□□ 0.87
PPM1D-201ENST00000305921 EHBP1L1Q8N3D4 1523 aa20.47■□□□□ 0.87
PPM1D-201ENST00000305921 DRC7Q8IY82 874 aa20.47■□□□□ 0.87
PPM1D-201ENST00000305921 TMEM132EQ6IEE7 984 aa20.45■□□□□ 0.86
PPM1D-201ENST00000305921 API5Q9BZZ5 524 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms