RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 KIF3BO15066 747 aa15.89■□□□□ 0.13
SCG2-201ENST00000305409 SPATA31E1Q6ZUB1 1445 aa15.89■□□□□ 0.13
SCG2-201ENST00000305409 ADGRL1O94910 1474 aa15.88■□□□□ 0.13
SCG2-201ENST00000305409 USP47Q96K76 1375 aa15.88■□□□□ 0.13
SCG2-201ENST00000305409 PLXNC1O60486 1568 aa15.87■□□□□ 0.13
SCG2-201ENST00000305409 ERBINQ96RT1 1412 aa15.86■□□□□ 0.13
SCG2-201ENST00000305409 NBPF1Q3BBV0 1214 aa15.85■□□□□ 0.13
SCG2-201ENST00000305409 ABCA9Q8IUA7 1624 aa15.84■□□□□ 0.13
SCG2-201ENST00000305409 CD109Q6YHK3 1445 aa15.84■□□□□ 0.13
SCG2-201ENST00000305409 UNC13BO14795 1591 aa15.84■□□□□ 0.13
SCG2-201ENST00000305409 ST20-MTHFSA0A0A6YYL1 179 aa15.83■□□□□ 0.13
SCG2-201ENST00000305409 CCER2I3L3R5 266 aa15.83■□□□□ 0.13
SCG2-201ENST00000305409 CCDC184Q52MB2 194 aa15.83■□□□□ 0.13
SCG2-201ENST00000305409 ZFYVE16Q7Z3T8 1539 aa15.83■□□□□ 0.13
SCG2-201ENST00000305409 RAPGEF3O95398 923 aa15.82■□□□□ 0.12
SCG2-201ENST00000305409 ROCK2O75116 1388 aaKnown RBP15.81■□□□□ 0.12
SCG2-201ENST00000305409 RTEL1-TNFRSF6BF6WH68 1400 aa15.81■□□□□ 0.12
SCG2-201ENST00000305409 ARAP3Q8WWN8 1544 aa15.81■□□□□ 0.12
SCG2-201ENST00000305409 CNTLNQ9NXG0 1405 aa15.81■□□□□ 0.12
SCG2-201ENST00000305409 UHRF1BP1Q6BDS2 1440 aa15.8■□□□□ 0.12
SCG2-201ENST00000305409 ATP7AQ04656 1500 aa15.8■□□□□ 0.12
SCG2-201ENST00000305409 IQGAP3Q86VI3 1631 aa15.79■□□□□ 0.12
SCG2-201ENST00000305409 A2MP01023 1474 aa15.78■□□□□ 0.12
SCG2-201ENST00000305409 RALGAPBQ86X10 1494 aa15.78■□□□□ 0.12
SCG2-201ENST00000305409 GGT6Q6P531 493 aa15.77■□□□□ 0.12
SCG2-201ENST00000305409 MAGI2Q86UL8 1455 aa15.77■□□□□ 0.11
SCG2-201ENST00000305409 DHX29Q7Z478 1369 aaKnown RBP15.77■□□□□ 0.11
SCG2-201ENST00000305409 PRKRIP1Q9H875 184 aaPredicted RBP15.77■□□□□ 0.11
SCG2-201ENST00000305409 BCORL1Q5H9F3 1711 aa15.76■□□□□ 0.11
SCG2-201ENST00000305409 PRAG1Q86YV5 1406 aa15.76■□□□□ 0.11
SCG2-201ENST00000305409 KDM5CP41229 1560 aa15.74■□□□□ 0.11
SCG2-201ENST00000305409 KANK1Q14678 1352 aa15.73■□□□□ 0.11
SCG2-201ENST00000305409 INO80Q9ULG1 1556 aaPredicted RBP15.73■□□□□ 0.11
SCG2-201ENST00000305409 FAM9BQ8IZU0 186 aa15.73■□□□□ 0.11
SCG2-201ENST00000305409 HNRNPUQ00839 825 aaKnown RBP eCLIP15.72■□□□□ 0.11
SCG2-201ENST00000305409 ATP10AO60312 1499 aa15.71■□□□□ 0.11
SCG2-201ENST00000305409 ZNF518AQ6AHZ1 1483 aa15.71■□□□□ 0.11
SCG2-201ENST00000305409 MRS2Q9HD23 443 aa15.71■□□□□ 0.1
SCG2-201ENST00000305409 E9PCH4 1651 aa15.7■□□□□ 0.1
SCG2-201ENST00000305409 FAM69CQ0P6D2 419 aa15.7■□□□□ 0.1
SCG2-201ENST00000305409 KIDINS220Q9ULH0 1771 aa15.69■□□□□ 0.1
SCG2-201ENST00000305409 SENP3-EIF4A1A0A087X0R7 540 aa15.69■□□□□ 0.1
SCG2-201ENST00000305409 CHGAP10645 457 aaKnown RBP15.69■□□□□ 0.1
SCG2-201ENST00000305409 POGZQ7Z3K3 1410 aa15.69■□□□□ 0.1
SCG2-201ENST00000305409 UGGT1Q9NYU2 1555 aa15.68■□□□□ 0.1
SCG2-201ENST00000305409 SENP3Q9H4L4 574 aaPredicted RBP15.66■□□□□ 0.1
SCG2-201ENST00000305409 PTPRTO14522 1441 aa15.65■□□□□ 0.1
SCG2-201ENST00000305409 WASHC2CQ9Y4E1 1318 aa15.64■□□□□ 0.09
SCG2-201ENST00000305409 TRPM1Q7Z4N2 1603 aa15.64■□□□□ 0.09
SCG2-201ENST00000305409 MROH1Q8NDA8 1641 aa15.64■□□□□ 0.09
SCG2-201ENST00000305409 SUPT16HQ9Y5B9 1047 aaKnown RBP15.64■□□□□ 0.09
SCG2-201ENST00000305409 DEPDC5O75140 1603 aa15.63■□□□□ 0.09
SCG2-201ENST00000305409 TESK2Q96S53 571 aa15.63■□□□□ 0.09
SCG2-201ENST00000305409 CLTCL1P53675 1640 aa15.63■□□□□ 0.09
SCG2-201ENST00000305409 BCANQ96GW7 911 aa15.62■□□□□ 0.09
SCG2-201ENST00000305409 RIMBP3CA6NJZ7 1639 aa15.62■□□□□ 0.09
SCG2-201ENST00000305409 RIMBP3BA6NNM3 1639 aa15.62■□□□□ 0.09
SCG2-201ENST00000305409 RIMBP3Q9UFD9 1639 aa15.62■□□□□ 0.09
SCG2-201ENST00000305409 CFAP65Q6ZU64 1925 aaKnown RBP15.62■□□□□ 0.09
SCG2-201ENST00000305409 DISP3Q9P2K9 1392 aa15.62■□□□□ 0.09
SCG2-201ENST00000305409 TRPM2O94759 1503 aa15.62■□□□□ 0.09
SCG2-201ENST00000305409 CFAP70Q5T0N1 1121 aa15.61■□□□□ 0.09
SCG2-201ENST00000305409 NUTM2DQ5VT03 806 aaPredicted RBP15.61■□□□□ 0.09
SCG2-201ENST00000305409 PRDM15P57071 1507 aaPredicted RBP15.61■□□□□ 0.09
SCG2-201ENST00000305409 GPRASP1Q5JY77 1395 aa15.61■□□□□ 0.09
SCG2-201ENST00000305409 ADGRF5Q8IZF2 1346 aa15.61■□□□□ 0.09
SCG2-201ENST00000305409 VWDEQ8N2E2 1590 aa15.61■□□□□ 0.09
SCG2-201ENST00000305409 ARID4BQ4LE39 1312 aaPredicted RBP15.6■□□□□ 0.09
SCG2-201ENST00000305409 TET3O43151 1660 aa15.6■□□□□ 0.09
SCG2-201ENST00000305409 MLH3Q9UHC1 1453 aa15.6■□□□□ 0.09
SCG2-201ENST00000305409 FRMPD1Q5SYB0 1578 aa15.6■□□□□ 0.09
SCG2-201ENST00000305409 YEATS2Q9ULM3 1422 aa15.6■□□□□ 0.09
SCG2-201ENST00000305409 SPHKAPQ2M3C7 1700 aa15.59■□□□□ 0.09
SCG2-201ENST00000305409 POLR1AO95602 1720 aaPredicted RBP15.58■□□□□ 0.09
SCG2-201ENST00000305409 NEO1Q92859 1461 aa15.58■□□□□ 0.08
SCG2-201ENST00000305409 FKBP8Q14318 412 aa15.58■□□□□ 0.08
SCG2-201ENST00000305409 HECW2Q9P2P5 1572 aa15.58■□□□□ 0.08
SCG2-201ENST00000305409 ABCA6Q8N139 1617 aa15.57■□□□□ 0.08
SCG2-201ENST00000305409 NPATQ14207 1427 aa15.57■□□□□ 0.08
SCG2-201ENST00000305409 PPRC1Q5VV67 1664 aaKnown RBP15.57■□□□□ 0.08
SCG2-201ENST00000305409 CFAP74Q9C0B2 1584 aa15.56■□□□□ 0.08
SCG2-201ENST00000305409 EIF2AK4Q9P2K8 1649 aaKnown RBP15.56■□□□□ 0.08
SCG2-201ENST00000305409 CEP152O94986 1710 aa15.56■□□□□ 0.08
SCG2-201ENST00000305409 CC2D1BQ5T0F9 858 aaKnown RBP15.56■□□□□ 0.08
SCG2-201ENST00000305409 PANK3Q9H999 370 aa15.56■□□□□ 0.08
SCG2-201ENST00000305409 EFCAB6Q5THR3 1501 aa15.55■□□□□ 0.08
SCG2-201ENST00000305409 TMF1P82094 1093 aa15.55■□□□□ 0.08
SCG2-201ENST00000305409 TMC1Q8TDI8 760 aa15.53■□□□□ 0.08
SCG2-201ENST00000305409 MADDQ8WXG6 1647 aa15.52■□□□□ 0.08
SCG2-201ENST00000305409 TSPOAP1O95153 1857 aa15.52■□□□□ 0.08
SCG2-201ENST00000305409 MLECQ14165 292 aa15.52■□□□□ 0.07
SCG2-201ENST00000305409 PER1O15534 1290 aaPredicted RBP15.51■□□□□ 0.07
SCG2-201ENST00000305409 IRX6P78412 446 aaPredicted RBP15.51■□□□□ 0.07
SCG2-201ENST00000305409 NOS1P29475 1434 aa15.51■□□□□ 0.07
SCG2-201ENST00000305409 RNF17Q9BXT8 1623 aaKnown RBP15.51■□□□□ 0.07
SCG2-201ENST00000305409 TMEM132EQ6IEE7 984 aa15.51■□□□□ 0.07
SCG2-201ENST00000305409 COL17A1Q9UMD9 1497 aaPredicted RBP15.51■□□□□ 0.07
SCG2-201ENST00000305409 MAP3K4Q9Y6R4 1608 aa15.51■□□□□ 0.07
SCG2-201ENST00000305409 DIP2CQ9Y2E4 1556 aa15.5■□□□□ 0.07
SCG2-201ENST00000305409 FBXO31Q5XUX0 539 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms