RNA–Protein interactions for RNA: ENST00000305286.7

EFCAB3-201, Transcript of EF-hand calcium binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFCAB3, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3-201ENST00000305286 TMEM132AQ24JP5 1023 aa8.84□□□□□ -0.99
EFCAB3-201ENST00000305286 BARGINQ6ZT62 677 aa8.84□□□□□ -0.99
EFCAB3-201ENST00000305286 GPIHBP1Q8IV16 184 aa8.84□□□□□ -0.99
EFCAB3-201ENST00000305286 UPF1Q92900 1129 aaKnown RBP eCLIP8.84□□□□□ -0.99
EFCAB3-201ENST00000305286 HS3ST6Q96QI5 342 aa8.84□□□□□ -0.99
EFCAB3-201ENST00000305286 WDR62O43379 1518 aa8.84□□□□□ -1
EFCAB3-201ENST00000305286 SPDYE16A6NNV3 312 aaPredicted RBP8.83□□□□□ -1
EFCAB3-201ENST00000305286 URB2Q14146 1524 aaKnown RBP8.83□□□□□ -1
EFCAB3-201ENST00000305286 G3V3G9 751 aa8.82□□□□□ -1
EFCAB3-201ENST00000305286 NEUROD2Q15784 382 aa8.82□□□□□ -1
EFCAB3-201ENST00000305286 GPR37O15354 613 aa8.81□□□□□ -1
EFCAB3-201ENST00000305286 TIMELESSQ9UNS1 1208 aa8.81□□□□□ -1
EFCAB3-201ENST00000305286 GTF3C3Q9Y5Q9 886 aa8.81□□□□□ -1
EFCAB3-201ENST00000305286 POTEB3A0JP26 581 aa8.8□□□□□ -1
EFCAB3-201ENST00000305286 POTEBQ6S5H4 581 aa8.8□□□□□ -1
EFCAB3-201ENST00000305286 OXER1Q8TDS5 423 aa8.8□□□□□ -1
EFCAB3-201ENST00000305286 L3MBTL3Q96JM7 780 aaPredicted RBP8.8□□□□□ -1
EFCAB3-201ENST00000305286 GRXCR2A6NFK2 248 aa8.78□□□□□ -1
EFCAB3-201ENST00000305286 MAP3K9P80192 1104 aa8.78□□□□□ -1
EFCAB3-201ENST00000305286 MYT1LQ9UL68 1186 aa8.78□□□□□ -1
EFCAB3-201ENST00000305286 TOPBP1Q92547 1522 aa8.77□□□□□ -1.01
EFCAB3-201ENST00000305286 DNMBPQ6XZF7 1577 aa8.77□□□□□ -1.01
EFCAB3-201ENST00000305286 PRIM1P49642 420 aaKnown RBP8.77□□□□□ -1.01
EFCAB3-201ENST00000305286 FAM205CA6NFA0 338 aa8.76□□□□□ -1.01
EFCAB3-201ENST00000305286 OSBPP22059 807 aa8.75□□□□□ -1.01
EFCAB3-201ENST00000305286 GPBP1L1Q9HC44 474 aaPredicted RBP8.75□□□□□ -1.01
EFCAB3-201ENST00000305286 ABCC8Q09428 1581 aa8.75□□□□□ -1.01
EFCAB3-201ENST00000305286 DDX12PQ92771 950 aa8.75□□□□□ -1.01
EFCAB3-201ENST00000305286 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.75□□□□□ -1.01
EFCAB3-201ENST00000305286 CUX1P39880 1505 aa8.74□□□□□ -1.01
EFCAB3-201ENST00000305286 AK7Q96M32 723 aa8.73□□□□□ -1.01
EFCAB3-201ENST00000305286 KRI1Q8N9T8 703 aaKnown RBP8.72□□□□□ -1.01
EFCAB3-201ENST00000305286 EVI5O60447 810 aa8.71□□□□□ -1.01
EFCAB3-201ENST00000305286 SYNJ1O43426 1573 aa8.7□□□□□ -1.02
EFCAB3-201ENST00000305286 NUTM2FA1L443 756 aa8.7□□□□□ -1.02
EFCAB3-201ENST00000305286 PTGER2P43116 358 aa8.7□□□□□ -1.02
EFCAB3-201ENST00000305286 POLA1P09884 1462 aaPredicted RBP8.7□□□□□ -1.02
EFCAB3-201ENST00000305286 FGD5Q6ZNL6 1462 aa8.7□□□□□ -1.02
EFCAB3-201ENST00000305286 TRIM66O15016 1216 aa8.7□□□□□ -1.02
EFCAB3-201ENST00000305286 FECHP22830 423 aa8.7□□□□□ -1.02
EFCAB3-201ENST00000305286 C3orf67Q6ZVT6 689 aa8.7□□□□□ -1.02
EFCAB3-201ENST00000305286 TARBP1Q13395 1621 aaKnown RBP8.69□□□□□ -1.02
EFCAB3-201ENST00000305286 BIVM-ERCC5R4GMW8 1640 aa8.69□□□□□ -1.02
EFCAB3-201ENST00000305286 WRNQ14191 1432 aaPredicted RBP eCLIP8.68□□□□□ -1.02
EFCAB3-201ENST00000305286 ZNF608Q9ULD9 1512 aaPredicted RBP8.68□□□□□ -1.02
EFCAB3-201ENST00000305286 IFT140Q96RY7 1462 aa8.68□□□□□ -1.02
EFCAB3-201ENST00000305286 RAD54L2Q9Y4B4 1467 aa8.68□□□□□ -1.02
EFCAB3-201ENST00000305286 TOP2BQ02880 1626 aa8.68□□□□□ -1.02
EFCAB3-201ENST00000305286 PTCD2Q8WV60 388 aaKnown RBP8.68□□□□□ -1.02
EFCAB3-201ENST00000305286 EIF4G3O43432 1585 aaKnown RBP8.67□□□□□ -1.02
EFCAB3-201ENST00000305286 PDE4DQ08499 809 aa8.67□□□□□ -1.02
EFCAB3-201ENST00000305286 CCDC102AQ96A19 550 aa8.65□□□□□ -1.02
EFCAB3-201ENST00000305286 KDM4CQ9H3R0 1056 aa8.65□□□□□ -1.02
EFCAB3-201ENST00000305286 WDR97A6NE52 1622 aa8.65□□□□□ -1.02
EFCAB3-201ENST00000305286 SOGA1O94964 1423 aa8.65□□□□□ -1.03
EFCAB3-201ENST00000305286 TBC1D12O60347 775 aa8.64□□□□□ -1.03
EFCAB3-201ENST00000305286 CDHR5Q9HBB8 845 aa8.64□□□□□ -1.03
EFCAB3-201ENST00000305286 SLC34A2O95436 690 aa8.64□□□□□ -1.03
EFCAB3-201ENST00000305286 MAP2K5Q13163 448 aa8.64□□□□□ -1.03
EFCAB3-201ENST00000305286 AQRO60306 1485 aaKnown RBP eCLIP8.63□□□□□ -1.03
EFCAB3-201ENST00000305286 GNPATO15228 680 aa8.63□□□□□ -1.03
EFCAB3-201ENST00000305286 ANO8Q9HCE9 1232 aaPredicted RBP8.63□□□□□ -1.03
EFCAB3-201ENST00000305286 IRF6O14896 467 aa8.62□□□□□ -1.03
EFCAB3-201ENST00000305286 PTGDRQ13258 359 aa8.62□□□□□ -1.03
EFCAB3-201ENST00000305286 IL27Q8NEV9 243 aa8.62□□□□□ -1.03
EFCAB3-201ENST00000305286 PLA2G2EQ9NZK7 142 aa8.62□□□□□ -1.03
EFCAB3-201ENST00000305286 MINK1Q8N4C8 1332 aaPredicted RBP8.62□□□□□ -1.03
EFCAB3-201ENST00000305286 TDRD9Q8NDG6 1382 aaKnown RBP8.61□□□□□ -1.03
EFCAB3-201ENST00000305286 FCHSD2O94868 740 aa8.61□□□□□ -1.03
EFCAB3-201ENST00000305286 PBRM1Q86U86 1689 aa8.6□□□□□ -1.03
EFCAB3-201ENST00000305286 HIC1Q14526 733 aa8.6□□□□□ -1.03
EFCAB3-201ENST00000305286 PCDHGA4Q9Y5G9 962 aa8.6□□□□□ -1.03
EFCAB3-201ENST00000305286 KDM4FA0A1W2PPD8 638 aa8.59□□□□□ -1.03
EFCAB3-201ENST00000305286 NPDC1Q9NQX5 325 aaPredicted RBP8.59□□□□□ -1.03
EFCAB3-201ENST00000305286 ABCA10Q8WWZ4 1543 aa8.59□□□□□ -1.03
EFCAB3-201ENST00000305286 ABCA5Q8WWZ7 1642 aa8.59□□□□□ -1.03
EFCAB3-201ENST00000305286 TSR1Q2NL82 804 aaKnown RBP8.59□□□□□ -1.03
EFCAB3-201ENST00000305286 PARP9Q8IXQ6 854 aa8.59□□□□□ -1.03
EFCAB3-201ENST00000305286 FAM117AQ9C073 453 aa8.59□□□□□ -1.03
EFCAB3-201ENST00000305286 PCDHGA10Q9Y5H3 936 aa8.59□□□□□ -1.03
EFCAB3-201ENST00000305286 EN1Q05925 392 aaPredicted RBP8.58□□□□□ -1.04
EFCAB3-201ENST00000305286 RBM33Q96EV2 1170 aaKnown RBP8.58□□□□□ -1.04
EFCAB3-201ENST00000305286 CHD1O14646 1710 aa8.57□□□□□ -1.04
EFCAB3-201ENST00000305286 AMHR2Q16671 573 aa8.57□□□□□ -1.04
EFCAB3-201ENST00000305286 ZNF316A6NFI3 1004 aaPredicted RBP8.56□□□□□ -1.04
EFCAB3-201ENST00000305286 PHF14O94880 888 aa8.56□□□□□ -1.04
EFCAB3-201ENST00000305286 C14orf37Q86TY3 774 aa8.56□□□□□ -1.04
EFCAB3-201ENST00000305286 GAPVD1Q14C86 1478 aa8.56□□□□□ -1.04
EFCAB3-201ENST00000305286 SNAPC4Q5SXM2 1469 aa8.56□□□□□ -1.04
EFCAB3-201ENST00000305286 PLEKHG3A1L390 1219 aa8.55□□□□□ -1.04
EFCAB3-201ENST00000305286 MAP3K7O43318 606 aa8.55□□□□□ -1.04
EFCAB3-201ENST00000305286 KHSRPQ92945 711 aaKnown RBP eCLIP8.55□□□□□ -1.04
EFCAB3-201ENST00000305286 GRIN2BQ13224 1484 aa8.54□□□□□ -1.04
EFCAB3-201ENST00000305286 REPIN1Q9BWE0 567 aaKnown RBP8.54□□□□□ -1.04
EFCAB3-201ENST00000305286 HOXB3P14651 431 aaPredicted RBP8.53□□□□□ -1.04
EFCAB3-201ENST00000305286 PHOX2BQ99453 314 aa8.53□□□□□ -1.04
EFCAB3-201ENST00000305286 EPAS1Q99814 870 aa8.53□□□□□ -1.04
EFCAB3-201ENST00000305286 IRX2Q9BZI1 471 aaPredicted RBP8.53□□□□□ -1.04
EFCAB3-201ENST00000305286 MAGI1Q96QZ7 1491 aaPredicted RBP8.51□□□□□ -1.05
EFCAB3-201ENST00000305286 FAM161AQ3B820 660 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms