RNA–Protein interactions for RNA: ENST00000304992.10

PRPF8-201, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF8, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-201ENST00000304992 HSP90B1P14625 803 aaKnown RBP12.76□□□□□ -0.37
PRPF8-201ENST00000304992 GPATCH3Q96I76 525 aa12.76□□□□□ -0.37
PRPF8-201ENST00000304992 CCER2I3L3R5 266 aa12.75□□□□□ -0.37
PRPF8-201ENST00000304992 C1orf141Q5JVX7 400 aa12.75□□□□□ -0.37
PRPF8-201ENST00000304992 COG3Q96JB2 828 aa12.74□□□□□ -0.37
PRPF8-201ENST00000304992 CHMP4AQ9BY43 222 aa12.74□□□□□ -0.37
PRPF8-201ENST00000304992 NAP1L5Q96NT1 182 aaPredicted RBP12.74□□□□□ -0.37
PRPF8-201ENST00000304992 FANCD2Q9BXW9 1451 aa12.74□□□□□ -0.37
PRPF8-201ENST00000304992 ERICH6BQ5W0A0 696 aa12.73□□□□□ -0.37
PRPF8-201ENST00000304992 MFAP1P55081 439 aaKnown RBP12.73□□□□□ -0.37
PRPF8-201ENST00000304992 CCDC144AA2RUR9 1427 aa12.73□□□□□ -0.37
PRPF8-201ENST00000304992 ST20-MTHFSA0A0A6YYL1 179 aa12.73□□□□□ -0.37
PRPF8-201ENST00000304992 TOP2AP11388 1531 aaKnown RBP12.73□□□□□ -0.37
PRPF8-201ENST00000304992 KLHL34Q8N239 644 aa12.73□□□□□ -0.37
PRPF8-201ENST00000304992 PSME1Q06323 249 aa12.72□□□□□ -0.37
PRPF8-201ENST00000304992 VGFO15240 615 aaPredicted RBP12.72□□□□□ -0.37
PRPF8-201ENST00000304992 LMOD3Q0VAK6 560 aa12.72□□□□□ -0.37
PRPF8-201ENST00000304992 HMMRO75330 724 aa12.72□□□□□ -0.37
PRPF8-201ENST00000304992 PANK3Q9H999 370 aa12.72□□□□□ -0.37
PRPF8-201ENST00000304992 CFAP44Q96MT7 982 aa12.72□□□□□ -0.37
PRPF8-201ENST00000304992 PHF23Q9BUL5 403 aaPredicted RBP12.72□□□□□ -0.37
PRPF8-201ENST00000304992 VPS53Q5VIR6 699 aa12.71□□□□□ -0.37
PRPF8-201ENST00000304992 NECTIN2Q92692 538 aa12.71□□□□□ -0.37
PRPF8-201ENST00000304992 BCL2L13Q9BXK5 485 aa12.71□□□□□ -0.37
PRPF8-201ENST00000304992 SLKQ9H2G2 1235 aaPredicted RBP12.71□□□□□ -0.37
PRPF8-201ENST00000304992 EIF2S2P20042 333 aaKnown RBP12.71□□□□□ -0.38
PRPF8-201ENST00000304992 TEFQ10587 303 aa12.7□□□□□ -0.38
PRPF8-201ENST00000304992 RASSF8Q8NHQ8 419 aa12.7□□□□□ -0.38
PRPF8-201ENST00000304992 CENPJQ9HC77 1338 aaPredicted RBP12.7□□□□□ -0.38
PRPF8-201ENST00000304992 FOXD4L1Q9NU39 408 aa12.7□□□□□ -0.38
PRPF8-201ENST00000304992 HDAC5Q9UQL6 1122 aa12.69□□□□□ -0.38
PRPF8-201ENST00000304992 PDE4CQ08493 712 aa12.69□□□□□ -0.38
PRPF8-201ENST00000304992 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
PRPF8-201ENST00000304992 GZF1Q9H116 711 aaPredicted RBP12.69□□□□□ -0.38
PRPF8-201ENST00000304992 EVC2Q86UK5 1308 aa12.68□□□□□ -0.38
PRPF8-201ENST00000304992 TTC5Q8N0Z6 440 aa12.68□□□□□ -0.38
PRPF8-201ENST00000304992 NLRP13Q86W25 1043 aa12.68□□□□□ -0.38
PRPF8-201ENST00000304992 CREBRFQ8IUR6 639 aa12.68□□□□□ -0.38
PRPF8-201ENST00000304992 PMFBP1Q8TBY8 1022 aa12.68□□□□□ -0.38
PRPF8-201ENST00000304992 RAD21O60216 631 aa12.68□□□□□ -0.38
PRPF8-201ENST00000304992 NUTM2GQ5VZR2 741 aa12.67□□□□□ -0.38
PRPF8-201ENST00000304992 ANO8Q9HCE9 1232 aaPredicted RBP12.66□□□□□ -0.38
PRPF8-201ENST00000304992 FBXW7Q969H0 707 aa12.66□□□□□ -0.38
PRPF8-201ENST00000304992 CGNL1Q0VF96 1302 aa12.66□□□□□ -0.38
PRPF8-201ENST00000304992 TCERG1O14776 1098 aaKnown RBP12.65□□□□□ -0.38
PRPF8-201ENST00000304992 MARCH6O60337 910 aa12.65□□□□□ -0.38
PRPF8-201ENST00000304992 ATF3P18847 181 aa12.65□□□□□ -0.38
PRPF8-201ENST00000304992 RILPL2Q969X0 211 aa12.65□□□□□ -0.38
PRPF8-201ENST00000304992 UACAQ9BZF9 1416 aa12.64□□□□□ -0.39
PRPF8-201ENST00000304992 FOXD4L5Q5VV16 416 aaPredicted RBP12.64□□□□□ -0.39
PRPF8-201ENST00000304992 FOXD4L4Q8WXT5 416 aaPredicted RBP12.64□□□□□ -0.39
PRPF8-201ENST00000304992 CHAF1AQ13111 956 aaPredicted RBP12.64□□□□□ -0.39
PRPF8-201ENST00000304992 KIAA2012Q0VF49 1180 aa12.64□□□□□ -0.39
PRPF8-201ENST00000304992 PRDM2Q13029 1718 aa12.63□□□□□ -0.39
PRPF8-201ENST00000304992 RUSC2Q8N2Y8 1516 aa12.63□□□□□ -0.39
PRPF8-201ENST00000304992 MSNP26038 577 aaKnown RBP12.63□□□□□ -0.39
PRPF8-201ENST00000304992 PRM3Q9NNZ6 103 aa12.63□□□□□ -0.39
PRPF8-201ENST00000304992 USP35Q9P2H5 1018 aa12.62□□□□□ -0.39
PRPF8-201ENST00000304992 HTATSF1O43719 755 aaKnown RBP12.62□□□□□ -0.39
PRPF8-201ENST00000304992 GBP4Q96PP9 640 aa12.62□□□□□ -0.39
PRPF8-201ENST00000304992 C9orf78Q9NZ63 289 aaPredicted RBP12.61□□□□□ -0.39
PRPF8-201ENST00000304992 RAD54L2Q9Y4B4 1467 aa12.61□□□□□ -0.39
PRPF8-201ENST00000304992 NEXNQ0ZGT2 675 aa12.61□□□□□ -0.39
PRPF8-201ENST00000304992 KIF15Q9NS87 1388 aa12.61□□□□□ -0.39
PRPF8-201ENST00000304992 PLIN1O60240 522 aa12.6□□□□□ -0.39
PRPF8-201ENST00000304992 ZNF644Q9H582 1327 aaPredicted RBP12.6□□□□□ -0.39
PRPF8-201ENST00000304992 GAPVD1Q14C86 1478 aa12.6□□□□□ -0.39
PRPF8-201ENST00000304992 ANKRD45Q5TZF3 282 aa12.6□□□□□ -0.39
PRPF8-201ENST00000304992 SMARCA4P51532 1647 aa12.6□□□□□ -0.39
PRPF8-201ENST00000304992 TRIM34Q9BYJ4 488 aa12.59□□□□□ -0.39
PRPF8-201ENST00000304992 VPS37DQ86XT2 251 aa12.59□□□□□ -0.39
PRPF8-201ENST00000304992 MYBBP1AQ9BQG0 1328 aaKnown RBP12.59□□□□□ -0.39
PRPF8-201ENST00000304992 NLRP2Q9NX02 1062 aa12.58□□□□□ -0.4
PRPF8-201ENST00000304992 HMOX1P09601 288 aa12.58□□□□□ -0.4
PRPF8-201ENST00000304992 AQRO60306 1485 aaKnown RBP eCLIP12.58□□□□□ -0.46e-7■■■■□ 26.4
PRPF8-201ENST00000304992 DIAPH1O60610 1272 aaKnown RBP12.58□□□□□ -0.4
PRPF8-201ENST00000304992 NOC3LQ8WTT2 800 aaKnown RBP12.58□□□□□ -0.4
PRPF8-201ENST00000304992 TMEM132EQ6IEE7 984 aa12.57□□□□□ -0.4
PRPF8-201ENST00000304992 KIF16BQ96L93 1317 aa12.57□□□□□ -0.4
PRPF8-201ENST00000304992 FOXD4L6Q3SYB3 417 aaPredicted RBP12.57□□□□□ -0.4
PRPF8-201ENST00000304992 SAMD1Q6SPF0 538 aaPredicted RBP12.57□□□□□ -0.4
PRPF8-201ENST00000304992 FOXD4L3Q6VB84 417 aaPredicted RBP12.57□□□□□ -0.4
PRPF8-201ENST00000304992 NOL10Q9BSC4 688 aaKnown RBP12.57□□□□□ -0.4
PRPF8-201ENST00000304992 APAF1O14727 1248 aa12.57□□□□□ -0.4
PRPF8-201ENST00000304992 SF3A1Q15459 793 aaKnown RBP12.57□□□□□ -0.4
PRPF8-201ENST00000304992 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.57□□□□□ -0.4
PRPF8-201ENST00000304992 RAPGEF4Q8WZA2 1011 aa12.57□□□□□ -0.4
PRPF8-201ENST00000304992 RBM19Q9Y4C8 960 aaKnown RBP12.57□□□□□ -0.4
PRPF8-201ENST00000304992 FGD5Q6ZNL6 1462 aa12.56□□□□□ -0.4
PRPF8-201ENST00000304992 USP47Q96K76 1375 aa12.56□□□□□ -0.4
PRPF8-201ENST00000304992 APPP05067 770 aa12.56□□□□□ -0.4
PRPF8-201ENST00000304992 WWC1Q8IX03 1113 aa12.56□□□□□ -0.4
PRPF8-201ENST00000304992 CCDC34Q96HJ3 373 aa12.56□□□□□ -0.4
PRPF8-201ENST00000304992 RIPK4P57078 832 aa12.56□□□□□ -0.4
PRPF8-201ENST00000304992 L1TD1Q5T7N2 865 aaKnown RBP12.55□□□□□ -0.4
PRPF8-201ENST00000304992 CABP2Q9NPB3 220 aa12.55□□□□□ -0.4
PRPF8-201ENST00000304992 CTDP1Q9Y5B0 961 aaPredicted RBP12.55□□□□□ -0.4
PRPF8-201ENST00000304992 AIMP1Q12904 312 aaKnown RBP12.55□□□□□ -0.4
PRPF8-201ENST00000304992 PES1O00541 588 aaKnown RBP12.55□□□□□ -0.4
PRPF8-201ENST00000304992 PHLDB1Q86UU1 1377 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms