RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 FAM135AQ9P2D6 1515 aa32.84■■■□□ 2.85
FOXA3-201ENST00000302177 PPP4R2Q9NY27 417 aa32.83■■■□□ 2.85
FOXA3-201ENST00000302177 KTN1Q86UP2 1357 aaKnown RBP32.8■■■□□ 2.84
FOXA3-201ENST00000302177 PLEKHH2Q8IVE3 1493 aa32.79■■■□□ 2.84
FOXA3-201ENST00000302177 UNC13BO14795 1591 aa32.77■■■□□ 2.84
FOXA3-201ENST00000302177 ABCC2Q92887 1545 aa32.77■■■□□ 2.84
FOXA3-201ENST00000302177 DCAF11Q8TEB1 546 aa32.76■■■□□ 2.83
FOXA3-201ENST00000302177 UHRF1BP1LA0JNW5 1464 aa32.75■■■□□ 2.83
FOXA3-201ENST00000302177 SMG6Q86US8 1419 aaKnown RBP32.75■■■□□ 2.83
FOXA3-201ENST00000302177 ANP32EQ9BTT0 268 aa32.75■■■□□ 2.83
FOXA3-201ENST00000302177 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.74■■■□□ 2.83
FOXA3-201ENST00000302177 PLXNC1O60486 1568 aa32.73■■■□□ 2.83
FOXA3-201ENST00000302177 IRX6P78412 446 aaPredicted RBP32.72■■■□□ 2.83
FOXA3-201ENST00000302177 ARHGAP5Q13017 1502 aa32.72■■■□□ 2.83
FOXA3-201ENST00000302177 SYCP2Q9BX26 1530 aa32.72■■■□□ 2.83
FOXA3-201ENST00000302177 CCDC144AA2RUR9 1427 aa32.71■■■□□ 2.83
FOXA3-201ENST00000302177 ST20-MTHFSA0A0A6YYL1 179 aa32.7■■■□□ 2.83
FOXA3-201ENST00000302177 TTC37Q6PGP7 1564 aa32.7■■■□□ 2.83
FOXA3-201ENST00000302177 KDM2AQ9Y2K7 1162 aa32.7■■■□□ 2.82
FOXA3-201ENST00000302177 POLR3GLQ9BT43 218 aa32.69■■■□□ 2.82
FOXA3-201ENST00000302177 PRAG1Q86YV5 1406 aa32.68■■■□□ 2.82
FOXA3-201ENST00000302177 PNISRQ8TF01 805 aaKnown RBP32.67■■■□□ 2.82
FOXA3-201ENST00000302177 RALBP1Q15311 655 aa32.67■■■□□ 2.82
FOXA3-201ENST00000302177 TRPM1Q7Z4N2 1603 aa32.66■■■□□ 2.82
FOXA3-201ENST00000302177 MYO5CQ9NQX4 1742 aa32.65■■■□□ 2.82
FOXA3-201ENST00000302177 IQGAP3Q86VI3 1631 aa32.65■■■□□ 2.82
FOXA3-201ENST00000302177 GPRASP1Q5JY77 1395 aa32.64■■■□□ 2.82
FOXA3-201ENST00000302177 E9PCH4 1651 aa32.64■■■□□ 2.82
FOXA3-201ENST00000302177 BRD4O60885 1362 aaPredicted RBP32.63■■■□□ 2.81
FOXA3-201ENST00000302177 ATP10AO60312 1499 aa32.63■■■□□ 2.81
FOXA3-201ENST00000302177 DUOX2Q9NRD8 1548 aa32.62■■■□□ 2.81
FOXA3-201ENST00000302177 NUDCQ9Y266 331 aa32.62■■■□□ 2.81
FOXA3-201ENST00000302177 LAMC1P11047 1609 aa32.62■■■□□ 2.81
FOXA3-201ENST00000302177 PLA2R1Q13018 1463 aa32.62■■■□□ 2.81
FOXA3-201ENST00000302177 TMC1Q8TDI8 760 aa32.61■■■□□ 2.81
FOXA3-201ENST00000302177 RNF123Q5XPI4 1314 aa32.59■■■□□ 2.81
FOXA3-201ENST00000302177 MYBBP1AQ9BQG0 1328 aaKnown RBP32.59■■■□□ 2.81
FOXA3-201ENST00000302177 MAGI2Q86UL8 1455 aa32.59■■■□□ 2.81
FOXA3-201ENST00000302177 LRPPRCP42704 1394 aaKnown RBP32.59■■■□□ 2.81
FOXA3-201ENST00000302177 ERBINQ96RT1 1412 aa32.58■■■□□ 2.81
FOXA3-201ENST00000302177 ZCCHC11Q5TAX3 1644 aaKnown RBP32.58■■■□□ 2.81
FOXA3-201ENST00000302177 ASXL2Q76L83 1435 aa32.58■■■□□ 2.81
FOXA3-201ENST00000302177 PLCH2O75038 1416 aa32.56■■■□□ 2.8
FOXA3-201ENST00000302177 FANCIQ9NVI1 1328 aa32.55■■■□□ 2.8
FOXA3-201ENST00000302177 FAM69CQ0P6D2 419 aa32.55■■■□□ 2.8
FOXA3-201ENST00000302177 A2MP01023 1474 aa32.53■■■□□ 2.8
FOXA3-201ENST00000302177 EIF2AK4Q9P2K8 1649 aaKnown RBP32.52■■■□□ 2.8
FOXA3-201ENST00000302177 WASHC2CQ9Y4E1 1318 aa32.5■■■□□ 2.79
FOXA3-201ENST00000302177 PRDM15P57071 1507 aaPredicted RBP32.49■■■□□ 2.79
FOXA3-201ENST00000302177 EFCAB2Q5VUJ9 269 aa32.49■■■□□ 2.79
FOXA3-201ENST00000302177 PARD3Q8TEW0 1356 aa32.46■■■□□ 2.79
FOXA3-201ENST00000302177 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.45■■■□□ 2.79
FOXA3-201ENST00000302177 CNGB1Q14028 1251 aaPredicted RBP32.43■■■□□ 2.78
FOXA3-201ENST00000302177 RGL3Q3MIN7 710 aa32.43■■■□□ 2.78
FOXA3-201ENST00000302177 COL17A1Q9UMD9 1497 aaPredicted RBP32.43■■■□□ 2.78
FOXA3-201ENST00000302177 NBPF1Q3BBV0 1214 aa32.42■■■□□ 2.78
FOXA3-201ENST00000302177 B4GALNT3Q6L9W6 998 aa32.42■■■□□ 2.78
FOXA3-201ENST00000302177 NLRP13Q86W25 1043 aa32.42■■■□□ 2.78
FOXA3-201ENST00000302177 ABCC1P33527 1531 aa32.42■■■□□ 2.78
FOXA3-201ENST00000302177 DIP2BQ9P265 1576 aa32.41■■■□□ 2.78
FOXA3-201ENST00000302177 KIF13AQ9H1H9 1805 aa32.41■■■□□ 2.78
FOXA3-201ENST00000302177 PER1O15534 1290 aaPredicted RBP32.41■■■□□ 2.78
FOXA3-201ENST00000302177 ARAP3Q8WWN8 1544 aa32.4■■■□□ 2.78
FOXA3-201ENST00000302177 WDR7Q9Y4E6 1490 aa32.39■■■□□ 2.78
FOXA3-201ENST00000302177 INSRP06213 1382 aa32.39■■■□□ 2.77
FOXA3-201ENST00000302177 TESK2Q96S53 571 aa32.38■■■□□ 2.77
FOXA3-201ENST00000302177 RTEL1-TNFRSF6BF6WH68 1400 aa32.38■■■□□ 2.77
FOXA3-201ENST00000302177 STAC3Q96MF2 364 aa32.36■■■□□ 2.77
FOXA3-201ENST00000302177 ZMYM4Q5VZL5 1548 aa32.34■■■□□ 2.77
FOXA3-201ENST00000302177 PDE3BQ13370 1112 aa32.32■■■□□ 2.77
FOXA3-201ENST00000302177 RNF17Q9BXT8 1623 aaKnown RBP32.31■■■□□ 2.76
FOXA3-201ENST00000302177 TRAPPC8Q9Y2L5 1435 aa32.31■■■□□ 2.76
FOXA3-201ENST00000302177 TMF1P82094 1093 aa32.3■■■□□ 2.76
FOXA3-201ENST00000302177 DISP3Q9P2K9 1392 aa32.28■■■□□ 2.76
FOXA3-201ENST00000302177 MSH5O43196 834 aa32.27■■■□□ 2.76
FOXA3-201ENST00000302177 SPAG9O60271 1321 aaKnown RBP32.24■■■□□ 2.75
FOXA3-201ENST00000302177 TRPM2O94759 1503 aa32.23■■■□□ 2.75
FOXA3-201ENST00000302177 PTPRTO14522 1441 aa32.23■■■□□ 2.75
FOXA3-201ENST00000302177 TSPOAP1O95153 1857 aa32.22■■■□□ 2.75
FOXA3-201ENST00000302177 CCDC136Q96JN2 1154 aa32.21■■■□□ 2.75
FOXA3-201ENST00000302177 GLI2P10070 1586 aa32.21■■■□□ 2.75
FOXA3-201ENST00000302177 ZFYVE16Q7Z3T8 1539 aa32.2■■■□□ 2.75
FOXA3-201ENST00000302177 DEPDC5O75140 1603 aa32.19■■■□□ 2.74
FOXA3-201ENST00000302177 PANK3Q9H999 370 aa32.19■■■□□ 2.74
FOXA3-201ENST00000302177 MADDQ8WXG6 1647 aa32.18■■■□□ 2.74
FOXA3-201ENST00000302177 SCAPERQ9BY12 1400 aa32.17■■■□□ 2.74
FOXA3-201ENST00000302177 BLMP54132 1417 aaPredicted RBP32.14■■■□□ 2.74
FOXA3-201ENST00000302177 CEP152O94986 1710 aa32.14■■■□□ 2.74
FOXA3-201ENST00000302177 NEURL4Q96JN8 1562 aa32.14■■■□□ 2.74
FOXA3-201ENST00000302177 IQGAP1P46940 1657 aa32.14■■■□□ 2.74
FOXA3-201ENST00000302177 SPHKAPQ2M3C7 1700 aa32.13■■■□□ 2.73
FOXA3-201ENST00000302177 CD109Q6YHK3 1445 aa32.13■■■□□ 2.73
FOXA3-201ENST00000302177 RRP1P56182 461 aaKnown RBP32.12■■■□□ 2.73
FOXA3-201ENST00000302177 CDCA8Q53HL2 280 aa32.12■■■□□ 2.73
FOXA3-201ENST00000302177 TET3O43151 1660 aa32.12■■■□□ 2.73
FOXA3-201ENST00000302177 RCAN3Q9UKA8 241 aa32.11■■■□□ 2.73
FOXA3-201ENST00000302177 MAP3K4Q9Y6R4 1608 aa32.11■■■□□ 2.73
FOXA3-201ENST00000302177 VWDEQ8N2E2 1590 aa32.1■■■□□ 2.73
FOXA3-201ENST00000302177 AFAP1Q8N556 730 aa32.1■■■□□ 2.73
FOXA3-201ENST00000302177 KANK1Q14678 1352 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms