RNA–Protein interactions for RNA: ENST00000301671.12

GHDC-201, Transcript of GH3 domain containing, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GHDC, Length 2,650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-201ENST00000301671 NBPF1Q3BBV0 1214 aa21.39■■□□□ 1.01
GHDC-201ENST00000301671 RALBP1Q15311 655 aa21.38■■□□□ 1.01
GHDC-201ENST00000301671 CDCA7LQ96GN5 454 aa21.38■■□□□ 1.01
GHDC-201ENST00000301671 BRD4O60885 1362 aaPredicted RBP21.38■■□□□ 1.01
GHDC-201ENST00000301671 RCAN3Q9UKA8 241 aa21.37■■□□□ 1.01
GHDC-201ENST00000301671 ZBTB47Q9UFB7 747 aaPredicted RBP21.36■■□□□ 1.01
GHDC-201ENST00000301671 CC2D1BQ5T0F9 858 aaKnown RBP21.35■■□□□ 1.01
GHDC-201ENST00000301671 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.34■■□□□ 1.01
GHDC-201ENST00000301671 CARMIL2Q6F5E8 1435 aa21.34■■□□□ 1.01
GHDC-201ENST00000301671 ADCY10Q96PN6 1610 aa21.34■■□□□ 1.01
GHDC-201ENST00000301671 PLIN1O60240 522 aa21.33■■□□□ 1.01
GHDC-201ENST00000301671 CDC42BPAQ5VT25 1732 aa21.33■■□□□ 1.01
GHDC-201ENST00000301671 ATP10BO94823 1461 aa21.32■■□□□ 1
GHDC-201ENST00000301671 SKAP1Q86WV1 359 aa21.32■■□□□ 1
GHDC-201ENST00000301671 MYT1LQ9UL68 1186 aa21.32■■□□□ 1
GHDC-201ENST00000301671 NLRP13Q86W25 1043 aa21.32■■□□□ 1
GHDC-201ENST00000301671 MAGI1Q96QZ7 1491 aaPredicted RBP21.31■■□□□ 1
GHDC-201ENST00000301671 ARHGEF12Q9NZN5 1544 aa21.31■■□□□ 1
GHDC-201ENST00000301671 ABCC10Q5T3U5 1492 aa21.31■■□□□ 1
GHDC-201ENST00000301671 KTN1Q86UP2 1357 aaKnown RBP21.29■■□□□ 1
GHDC-201ENST00000301671 SYNJ2O15056 1496 aa21.28■■□□□ 1
GHDC-201ENST00000301671 PER1O15534 1290 aaPredicted RBP21.27■■□□□ 1
GHDC-201ENST00000301671 SHANK2Q9UPX8 1470 aa21.26■□□□□ 0.99
GHDC-201ENST00000301671 PARD3Q8TEW0 1356 aa21.25■□□□□ 0.99
GHDC-201ENST00000301671 PDE4AP27815 886 aa21.24■□□□□ 0.99
GHDC-201ENST00000301671 PANK3Q9H999 370 aa21.24■□□□□ 0.99
GHDC-201ENST00000301671 PTPRGP23470 1445 aa21.24■□□□□ 0.99
GHDC-201ENST00000301671 CCDC144AA2RUR9 1427 aa21.23■□□□□ 0.99
GHDC-201ENST00000301671 PRAG1Q86YV5 1406 aa21.23■□□□□ 0.99
GHDC-201ENST00000301671 DISP3Q9P2K9 1392 aa21.23■□□□□ 0.99
GHDC-201ENST00000301671 RTL5Q5HYW3 569 aaPredicted RBP21.22■□□□□ 0.99
GHDC-201ENST00000301671 ERCC6Q03468 1493 aa21.22■□□□□ 0.99
GHDC-201ENST00000301671 KDM5DQ9BY66 1539 aa21.22■□□□□ 0.99
GHDC-201ENST00000301671 FAM135AQ9P2D6 1515 aa21.22■□□□□ 0.99
GHDC-201ENST00000301671 LAS1LQ9Y4W2 734 aaKnown RBP21.22■□□□□ 0.99
GHDC-201ENST00000301671 E9PCH4 1651 aa21.22■□□□□ 0.99
GHDC-201ENST00000301671 ABCA8O94911 1581 aa21.21■□□□□ 0.99
GHDC-201ENST00000301671 TCERG1O14776 1098 aaKnown RBP21.21■□□□□ 0.99
GHDC-201ENST00000301671 TESK2Q96S53 571 aa21.2■□□□□ 0.98
GHDC-201ENST00000301671 CRBNQ96SW2 442 aa21.2■□□□□ 0.98
GHDC-201ENST00000301671 NUP160Q12769 1436 aa21.19■□□□□ 0.98
GHDC-201ENST00000301671 PDE3BQ13370 1112 aa21.19■□□□□ 0.98
GHDC-201ENST00000301671 BACH2Q9BYV9 841 aa21.17■□□□□ 0.98
GHDC-201ENST00000301671 PLA2R1Q13018 1463 aa21.17■□□□□ 0.98
GHDC-201ENST00000301671 C20orf194Q5TEA3 1177 aa21.16■□□□□ 0.98
GHDC-201ENST00000301671 TRPM1Q7Z4N2 1603 aa21.16■□□□□ 0.98
GHDC-201ENST00000301671 A2MP01023 1474 aa21.15■□□□□ 0.98
GHDC-201ENST00000301671 CCDC141Q6ZP82 1450 aa21.15■□□□□ 0.98
GHDC-201ENST00000301671 SAMD9LQ8IVG5 1584 aa21.14■□□□□ 0.97
GHDC-201ENST00000301671 ADAMTS8Q9UP79 889 aa21.13■□□□□ 0.97
GHDC-201ENST00000301671 COL17A1Q9UMD9 1497 aaPredicted RBP21.11■□□□□ 0.97
GHDC-201ENST00000301671 ARHGEF5Q12774 1597 aa21.11■□□□□ 0.97
GHDC-201ENST00000301671 ERBINQ96RT1 1412 aa21.11■□□□□ 0.97
GHDC-201ENST00000301671 TMF1P82094 1093 aa21.1■□□□□ 0.97
GHDC-201ENST00000301671 SYCP2Q9BX26 1530 aa21.08■□□□□ 0.97
GHDC-201ENST00000301671 PLEKHH2Q8IVE3 1493 aa21.08■□□□□ 0.97
GHDC-201ENST00000301671 GPRASP1Q5JY77 1395 aa21.08■□□□□ 0.97
GHDC-201ENST00000301671 NEFMP07197 916 aa21.08■□□□□ 0.97
GHDC-201ENST00000301671 CDC42BPBQ9Y5S2 1711 aa21.08■□□□□ 0.96
GHDC-201ENST00000301671 MS4A1P11836 297 aa21.07■□□□□ 0.96
GHDC-201ENST00000301671 BLMP54132 1417 aaPredicted RBP21.06■□□□□ 0.96
GHDC-201ENST00000301671 RSPH4AQ5TD94 716 aa21.04■□□□□ 0.96
GHDC-201ENST00000301671 WASHC2CQ9Y4E1 1318 aa21.04■□□□□ 0.96
GHDC-201ENST00000301671 SLC4A3P48751 1232 aa21.03■□□□□ 0.96
GHDC-201ENST00000301671 ARHGAP5Q13017 1502 aa21.03■□□□□ 0.96
GHDC-201ENST00000301671 PRDM15P57071 1507 aaPredicted RBP21.03■□□□□ 0.96
GHDC-201ENST00000301671 PLEKHH1Q9ULM0 1364 aa21.02■□□□□ 0.95
GHDC-201ENST00000301671 PPP2R1AP30153 589 aa21.01■□□□□ 0.95
GHDC-201ENST00000301671 KNSTRNQ9Y448 316 aa21.01■□□□□ 0.95
GHDC-201ENST00000301671 PREX2Q70Z35 1606 aa21.01■□□□□ 0.95
GHDC-201ENST00000301671 WDR43Q15061 677 aaKnown RBP eCLIP21.01■□□□□ 0.95
GHDC-201ENST00000301671 CCDC146Q8IYE0 955 aa20.99■□□□□ 0.95
GHDC-201ENST00000301671 MAGI2Q86UL8 1455 aa20.99■□□□□ 0.95
GHDC-201ENST00000301671 TTC37Q6PGP7 1564 aa20.98■□□□□ 0.95
GHDC-201ENST00000301671 DUSP27Q5VZP5 1158 aa20.98■□□□□ 0.95
GHDC-201ENST00000301671 ZMYM4Q5VZL5 1548 aa20.97■□□□□ 0.95
GHDC-201ENST00000301671 MYO5CQ9NQX4 1742 aa20.97■□□□□ 0.95
GHDC-201ENST00000301671 IL27Q8NEV9 243 aa20.97■□□□□ 0.95
GHDC-201ENST00000301671 UNC13BO14795 1591 aa20.96■□□□□ 0.95
GHDC-201ENST00000301671 RTN4Q9NQC3 1192 aaKnown RBP20.95■□□□□ 0.94
GHDC-201ENST00000301671 AMER1Q5JTC6 1135 aaPredicted RBP20.94■□□□□ 0.94
GHDC-201ENST00000301671 KDM2BQ8NHM5 1336 aa20.94■□□□□ 0.94
GHDC-201ENST00000301671 WDR7Q9Y4E6 1490 aa20.93■□□□□ 0.94
GHDC-201ENST00000301671 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.93■□□□□ 0.94
GHDC-201ENST00000301671 RGS3P49796 1198 aa20.92■□□□□ 0.94
GHDC-201ENST00000301671 GOLGA2Q08379 1002 aa20.92■□□□□ 0.94
GHDC-201ENST00000301671 SPINK5Q9NQ38 1064 aaPredicted RBP20.92■□□□□ 0.94
GHDC-201ENST00000301671 IQGAP3Q86VI3 1631 aa20.9■□□□□ 0.94
GHDC-201ENST00000301671 LAMC1P11047 1609 aa20.89■□□□□ 0.94
GHDC-201ENST00000301671 INSRP06213 1382 aa20.89■□□□□ 0.94
GHDC-201ENST00000301671 PPM1GO15355 546 aaPredicted RBP20.89■□□□□ 0.93
GHDC-201ENST00000301671 EIF2AK4Q9P2K8 1649 aaKnown RBP20.89■□□□□ 0.93
GHDC-201ENST00000301671 CENPQQ7L2Z9 268 aaPredicted RBP20.88■□□□□ 0.93
GHDC-201ENST00000301671 ZNF521Q96K83 1311 aa20.88■□□□□ 0.93
GHDC-201ENST00000301671 APAF1O14727 1248 aa20.88■□□□□ 0.93
GHDC-201ENST00000301671 DDRGK1Q96HY6 314 aa20.88■□□□□ 0.93
GHDC-201ENST00000301671 BCAR3O75815 825 aa20.87■□□□□ 0.93
GHDC-201ENST00000301671 MAST1Q9Y2H9 1570 aa20.86■□□□□ 0.93
GHDC-201ENST00000301671 SLFN5Q08AF3 891 aa20.86■□□□□ 0.93
GHDC-201ENST00000301671 USP35Q9P2H5 1018 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms