RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 WASHC2AQ641Q2 1341 aa24.34■■□□□ 1.49
TSR1-201ENST00000301364 PLCB2Q00722 1185 aa24.34■■□□□ 1.49
TSR1-201ENST00000301364 CLUAP1Q96AJ1 413 aa24.34■■□□□ 1.49
TSR1-201ENST00000301364 PTPRGP23470 1445 aa24.33■■□□□ 1.48
TSR1-201ENST00000301364 MFAP1P55081 439 aaKnown RBP24.32■■□□□ 1.48
TSR1-201ENST00000301364 CGNL1Q0VF96 1302 aa24.32■■□□□ 1.48
TSR1-201ENST00000301364 FGD1P98174 961 aa24.31■■□□□ 1.48
TSR1-201ENST00000301364 CFTRP13569 1480 aa24.31■■□□□ 1.48
TSR1-201ENST00000301364 PLIN1O60240 522 aa24.31■■□□□ 1.48
TSR1-201ENST00000301364 CRBNQ96SW2 442 aa24.31■■□□□ 1.48
TSR1-201ENST00000301364 MIA2Q96PC5 1412 aa24.3■■□□□ 1.48
TSR1-201ENST00000301364 LMOD2Q6P5Q4 547 aa24.3■■□□□ 1.48
TSR1-201ENST00000301364 SOX12O15370 315 aa24.3■■□□□ 1.48
TSR1-201ENST00000301364 MLECQ14165 292 aa24.29■■□□□ 1.48
TSR1-201ENST00000301364 TOP2BQ02880 1626 aa24.29■■□□□ 1.48
TSR1-201ENST00000301364 GOLGA6L4A6NEF3 574 aa24.29■■□□□ 1.48
TSR1-201ENST00000301364 WASHC2CQ9Y4E1 1318 aa24.28■■□□□ 1.48
TSR1-201ENST00000301364 A0A0G2JS52 829 aa24.28■■□□□ 1.48
TSR1-201ENST00000301364 STAC3Q96MF2 364 aa24.27■■□□□ 1.48
TSR1-201ENST00000301364 ZNF644Q9H582 1327 aaPredicted RBP24.27■■□□□ 1.48
TSR1-201ENST00000301364 TRAK1Q9UPV9 953 aa24.27■■□□□ 1.48
TSR1-201ENST00000301364 GOLGA6L3A6NEY3 463 aa24.27■■□□□ 1.48
TSR1-201ENST00000301364 LMOD3Q0VAK6 560 aa24.27■■□□□ 1.48
TSR1-201ENST00000301364 GZF1Q9H116 711 aaPredicted RBP24.26■■□□□ 1.47
TSR1-201ENST00000301364 CHMP4AQ9BY43 222 aa24.25■■□□□ 1.47
TSR1-201ENST00000301364 APBB1O00213 710 aa24.25■■□□□ 1.47
TSR1-201ENST00000301364 GOLGA6L6A8MZA4 724 aa24.24■■□□□ 1.47
TSR1-201ENST00000301364 EFCAB5A4FU69 1503 aa24.24■■□□□ 1.47
TSR1-201ENST00000301364 ANKRD50Q9ULJ7 1429 aa24.24■■□□□ 1.47
TSR1-201ENST00000301364 BRD4O60885 1362 aaPredicted RBP24.23■■□□□ 1.47
TSR1-201ENST00000301364 HMMRO75330 724 aa24.23■■□□□ 1.47
TSR1-201ENST00000301364 KIAA1211Q6ZU35 1233 aa24.23■■□□□ 1.47
TSR1-201ENST00000301364 APAF1O14727 1248 aa24.22■■□□□ 1.47
TSR1-201ENST00000301364 NRDCO43847 1150 aa24.21■■□□□ 1.47
TSR1-201ENST00000301364 RRP7AQ9Y3A4 280 aaKnown RBP24.2■■□□□ 1.47
TSR1-201ENST00000301364 ZKSCAN2Q63HK3 967 aa24.2■■□□□ 1.46
TSR1-201ENST00000301364 STK31Q9BXU1 1019 aa24.2■■□□□ 1.46
TSR1-201ENST00000301364 HFM1A2PYH4 1435 aa24.2■■□□□ 1.46
TSR1-201ENST00000301364 CHAF1AQ13111 956 aaPredicted RBP24.19■■□□□ 1.46
TSR1-201ENST00000301364 TIAM1Q13009 1591 aa24.18■■□□□ 1.46
TSR1-201ENST00000301364 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.18■■□□□ 1.463e-22■■□□□ 11.4
TSR1-201ENST00000301364 VGFO15240 615 aaPredicted RBP24.17■■□□□ 1.46
TSR1-201ENST00000301364 EVC2Q86UK5 1308 aa24.17■■□□□ 1.46
TSR1-201ENST00000301364 GSE1Q14687 1217 aa24.16■■□□□ 1.46
TSR1-201ENST00000301364 SYAP1Q96A49 352 aaPredicted RBP24.15■■□□□ 1.46
TSR1-201ENST00000301364 CDK11BP21127 795 aaKnown RBP24.15■■□□□ 1.46
TSR1-201ENST00000301364 COG6Q9Y2V7 657 aa24.15■■□□□ 1.46
TSR1-201ENST00000301364 DDX11L8A8MPP1 907 aa24.12■■□□□ 1.45
TSR1-201ENST00000301364 NUTM2DQ5VT03 806 aaPredicted RBP24.12■■□□□ 1.45
TSR1-201ENST00000301364 NAP1L2Q9ULW6 460 aaPredicted RBP24.12■■□□□ 1.45
TSR1-201ENST00000301364 BCL2L13Q9BXK5 485 aa24.12■■□□□ 1.45
TSR1-201ENST00000301364 EHBP1L1Q8N3D4 1523 aa24.11■■□□□ 1.45
TSR1-201ENST00000301364 HDAC5Q9UQL6 1122 aa24.11■■□□□ 1.45
TSR1-201ENST00000301364 SLC4A3P48751 1232 aa24.11■■□□□ 1.45
TSR1-201ENST00000301364 AAMPQ13685 434 aa24.09■■□□□ 1.45
TSR1-201ENST00000301364 ST18O60284 1047 aa24.08■■□□□ 1.44
TSR1-201ENST00000301364 HMGXB3Q12766 1538 aa24.08■■□□□ 1.44
TSR1-201ENST00000301364 AQRO60306 1485 aaKnown RBP eCLIP24.07■■□□□ 1.443e-7■■■■■ 38.6
TSR1-201ENST00000301364 KIAA2012Q0VF49 1180 aa24.07■■□□□ 1.44
TSR1-201ENST00000301364 DDX19BQ9UMR2 479 aa24.07■■□□□ 1.44
TSR1-201ENST00000301364 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.06■■□□□ 1.44
TSR1-201ENST00000301364 RUNDC1Q96C34 613 aa24.05■■□□□ 1.44
TSR1-201ENST00000301364 GRIN2BQ13224 1484 aa24.05■■□□□ 1.44
TSR1-201ENST00000301364 TRIM6-TRIM34B2RNG4 842 aa24.03■■□□□ 1.44
TSR1-201ENST00000301364 DRC7Q8IY82 874 aa24.03■■□□□ 1.44
TSR1-201ENST00000301364 WDR97A6NE52 1622 aa24.03■■□□□ 1.44
TSR1-201ENST00000301364 NBPF8Q3BBV2 869 aa24.03■■□□□ 1.44
TSR1-201ENST00000301364 SLC4A10Q6U841 1118 aa24.03■■□□□ 1.44
TSR1-201ENST00000301364 HTATSF1O43719 755 aaKnown RBP24.02■■□□□ 1.44
TSR1-201ENST00000301364 DZIP1LQ8IYY4 767 aaKnown RBP24.02■■□□□ 1.44
TSR1-201ENST00000301364 KIAA1107Q9UPP5 1409 aa24.02■■□□□ 1.44
TSR1-201ENST00000301364 ANKRD45Q5TZF3 282 aa24.02■■□□□ 1.44
TSR1-201ENST00000301364 PAK3O75914 559 aaPredicted RBP24.02■■□□□ 1.44
TSR1-201ENST00000301364 PRDM2Q13029 1718 aa24.01■■□□□ 1.43
TSR1-201ENST00000301364 SKOR2Q2VWA4 1001 aaPredicted RBP24.01■■□□□ 1.43
TSR1-201ENST00000301364 GPATCH3Q96I76 525 aa24.01■■□□□ 1.43
TSR1-201ENST00000301364 ADAMTS8Q9UP79 889 aa23.99■■□□□ 1.43
TSR1-201ENST00000301364 FOXD4L1Q9NU39 408 aa23.98■■□□□ 1.43
TSR1-201ENST00000301364 DIAPH1O60610 1272 aaKnown RBP23.97■■□□□ 1.43
TSR1-201ENST00000301364 CSPP1Q1MSJ5 1256 aa23.97■■□□□ 1.43
TSR1-201ENST00000301364 PNISRQ8TF01 805 aaKnown RBP23.97■■□□□ 1.43
TSR1-201ENST00000301364 COG3Q96JB2 828 aa23.96■■□□□ 1.43
TSR1-201ENST00000301364 AMPHP49418 695 aa23.96■■□□□ 1.43
TSR1-201ENST00000301364 TAOK2Q9UL54 1235 aa23.96■■□□□ 1.43
TSR1-201ENST00000301364 NGDNQ8NEJ9 315 aaKnown RBP23.96■■□□□ 1.43
TSR1-201ENST00000301364 ELL2O00472 640 aaPredicted RBP23.95■■□□□ 1.42
TSR1-201ENST00000301364 EID1Q9Y6B2 187 aa23.95■■□□□ 1.42
TSR1-201ENST00000301364 NAIPQ13075 1403 aa23.95■■□□□ 1.42
TSR1-201ENST00000301364 TOPBP1Q92547 1522 aa23.95■■□□□ 1.42
TSR1-201ENST00000301364 MAP3K1Q13233 1512 aa23.94■■□□□ 1.42
TSR1-201ENST00000301364 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
TSR1-201ENST00000301364 SMG6Q86US8 1419 aaKnown RBP23.94■■□□□ 1.42
TSR1-201ENST00000301364 PHF14O94880 888 aa23.93■■□□□ 1.42
TSR1-201ENST00000301364 CHMP5Q9NZZ3 219 aa23.93■■□□□ 1.42
TSR1-201ENST00000301364 CDCA7LQ96GN5 454 aa23.93■■□□□ 1.42
TSR1-201ENST00000301364 KIF16BQ96L93 1317 aa23.93■■□□□ 1.42
TSR1-201ENST00000301364 RIPK4P57078 832 aa23.93■■□□□ 1.42
TSR1-201ENST00000301364 API5Q9BZZ5 524 aaKnown RBP23.92■■□□□ 1.42
TSR1-201ENST00000301364 MINK1Q8N4C8 1332 aaPredicted RBP23.91■■□□□ 1.42
TSR1-201ENST00000301364 DDX49Q9Y6V7 483 aaKnown RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms