RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 CC2D1BQ5T0F9 858 aaKnown RBP13.72□□□□□ -0.21
FOXN4-201ENST00000299162 ADGRL2O95490 1459 aa13.72□□□□□ -0.21
FOXN4-201ENST00000299162 PLEKHG5O94827 1062 aa13.72□□□□□ -0.21
FOXN4-201ENST00000299162 TTC37Q6PGP7 1564 aa13.71□□□□□ -0.21
FOXN4-201ENST00000299162 KIF3BO15066 747 aa13.71□□□□□ -0.21
FOXN4-201ENST00000299162 SAMD9LQ8IVG5 1584 aa13.71□□□□□ -0.22
FOXN4-201ENST00000299162 RSPH4AQ5TD94 716 aa13.7□□□□□ -0.22
FOXN4-201ENST00000299162 SPATA31E1Q6ZUB1 1445 aa13.69□□□□□ -0.22
FOXN4-201ENST00000299162 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.69□□□□□ -0.22
FOXN4-201ENST00000299162 ADCY10Q96PN6 1610 aa13.69□□□□□ -0.22
FOXN4-201ENST00000299162 ADGBQ8N7X0 1667 aa13.69□□□□□ -0.22
FOXN4-201ENST00000299162 TRAPPC8Q9Y2L5 1435 aa13.68□□□□□ -0.22
FOXN4-201ENST00000299162 NPM1P06748 294 aaKnown RBP eCLIP13.66□□□□□ -0.22
FOXN4-201ENST00000299162 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.66□□□□□ -0.22
FOXN4-201ENST00000299162 ARHGEF12Q9NZN5 1544 aa13.66□□□□□ -0.22
FOXN4-201ENST00000299162 FAM135AQ9P2D6 1515 aa13.66□□□□□ -0.22
FOXN4-201ENST00000299162 CDC42BPBQ9Y5S2 1711 aa13.66□□□□□ -0.22
FOXN4-201ENST00000299162 DEKP35659 375 aaKnown RBP13.66□□□□□ -0.22
FOXN4-201ENST00000299162 B4GALNT3Q6L9W6 998 aa13.65□□□□□ -0.22
FOXN4-201ENST00000299162 GGT6Q6P531 493 aa13.65□□□□□ -0.23
FOXN4-201ENST00000299162 RTN4Q9NQC3 1192 aaKnown RBP13.65□□□□□ -0.23
FOXN4-201ENST00000299162 CROCC2H7BZ55 1655 aa13.64□□□□□ -0.23
FOXN4-201ENST00000299162 ABCC2Q92887 1545 aa13.64□□□□□ -0.23
FOXN4-201ENST00000299162 SHANK2Q9UPX8 1470 aa13.63□□□□□ -0.23
FOXN4-201ENST00000299162 NUTM2DQ5VT03 806 aaPredicted RBP13.63□□□□□ -0.23
FOXN4-201ENST00000299162 SCAPERQ9BY12 1400 aa13.63□□□□□ -0.23
FOXN4-201ENST00000299162 BCORL1Q5H9F3 1711 aa13.61□□□□□ -0.23
FOXN4-201ENST00000299162 DHX29Q7Z478 1369 aaKnown RBP13.61□□□□□ -0.23
FOXN4-201ENST00000299162 PANK3Q9H999 370 aa13.6□□□□□ -0.23
FOXN4-201ENST00000299162 PLCH2O75038 1416 aa13.6□□□□□ -0.23
FOXN4-201ENST00000299162 PREX2Q70Z35 1606 aa13.6□□□□□ -0.23
FOXN4-201ENST00000299162 PLA2R1Q13018 1463 aa13.59□□□□□ -0.23
FOXN4-201ENST00000299162 OSCARQ8IYS5 282 aa13.58□□□□□ -0.24
FOXN4-201ENST00000299162 ZBED9Q6R2W3 1325 aa13.57□□□□□ -0.24
FOXN4-201ENST00000299162 RALGAPBQ86X10 1494 aa13.57□□□□□ -0.24
FOXN4-201ENST00000299162 ARHGEF5Q12774 1597 aa13.56□□□□□ -0.24
FOXN4-201ENST00000299162 DISP3Q9P2K9 1392 aa13.56□□□□□ -0.24
FOXN4-201ENST00000299162 ZCCHC11Q5TAX3 1644 aaKnown RBP13.56□□□□□ -0.24
FOXN4-201ENST00000299162 RAPGEF3O95398 923 aa13.55□□□□□ -0.24
FOXN4-201ENST00000299162 PNISRQ8TF01 805 aaKnown RBP13.55□□□□□ -0.24
FOXN4-201ENST00000299162 TMF1P82094 1093 aa13.55□□□□□ -0.24
FOXN4-201ENST00000299162 PRAG1Q86YV5 1406 aa13.55□□□□□ -0.24
FOXN4-201ENST00000299162 A2MP01023 1474 aa13.55□□□□□ -0.24
FOXN4-201ENST00000299162 CFAP70Q5T0N1 1121 aa13.54□□□□□ -0.24
FOXN4-201ENST00000299162 CYB5RLQ6IPT4 315 aa13.54□□□□□ -0.24
FOXN4-201ENST00000299162 MYO5CQ9NQX4 1742 aa13.54□□□□□ -0.24
FOXN4-201ENST00000299162 FANCAO15360 1455 aa13.54□□□□□ -0.24
FOXN4-201ENST00000299162 KDM5CP41229 1560 aa13.54□□□□□ -0.24
FOXN4-201ENST00000299162 UHRF1BP1Q6BDS2 1440 aa13.52□□□□□ -0.24
FOXN4-201ENST00000299162 MYBBP1AQ9BQG0 1328 aaKnown RBP13.52□□□□□ -0.25
FOXN4-201ENST00000299162 SHROOM2Q13796 1616 aa13.52□□□□□ -0.25
FOXN4-201ENST00000299162 TNNT2P45379 298 aaPredicted RBP13.52□□□□□ -0.25
FOXN4-201ENST00000299162 SAFB2Q14151 953 aaKnown RBP eCLIP13.52□□□□□ -0.25
FOXN4-201ENST00000299162 PKNOX2Q96KN3 472 aa13.52□□□□□ -0.25
FOXN4-201ENST00000299162 TESK2Q96S53 571 aa13.52□□□□□ -0.25
FOXN4-201ENST00000299162 KTN1Q86UP2 1357 aaKnown RBP13.51□□□□□ -0.25
FOXN4-201ENST00000299162 ASXL2Q76L83 1435 aa13.51□□□□□ -0.25
FOXN4-201ENST00000299162 KANK1Q14678 1352 aa13.5□□□□□ -0.25
FOXN4-201ENST00000299162 ADGRL1O94910 1474 aa13.5□□□□□ -0.25
FOXN4-201ENST00000299162 CDCA7LQ96GN5 454 aa13.5□□□□□ -0.25
FOXN4-201ENST00000299162 KNSTRNQ9Y448 316 aa13.5□□□□□ -0.25
FOXN4-201ENST00000299162 WDR7Q9Y4E6 1490 aa13.49□□□□□ -0.25
FOXN4-201ENST00000299162 DUOX2Q9NRD8 1548 aa13.49□□□□□ -0.25
FOXN4-201ENST00000299162 TMEM132EQ6IEE7 984 aa13.49□□□□□ -0.25
FOXN4-201ENST00000299162 RALBP1Q15311 655 aa13.49□□□□□ -0.25
FOXN4-201ENST00000299162 TRAK1Q9UPV9 953 aa13.49□□□□□ -0.25
FOXN4-201ENST00000299162 PPP4R2Q9NY27 417 aa13.48□□□□□ -0.25
FOXN4-201ENST00000299162 NUDCQ9Y266 331 aa13.48□□□□□ -0.25
FOXN4-201ENST00000299162 CLASP1Q7Z460 1538 aa13.48□□□□□ -0.25
FOXN4-201ENST00000299162 ADGRF5Q8IZF2 1346 aa13.48□□□□□ -0.25
FOXN4-201ENST00000299162 NPM2Q86SE8 214 aaKnown RBP13.48□□□□□ -0.25
FOXN4-201ENST00000299162 NLRP13Q86W25 1043 aa13.48□□□□□ -0.25
FOXN4-201ENST00000299162 KDM5DQ9BY66 1539 aa13.48□□□□□ -0.25
FOXN4-201ENST00000299162 CFAP65Q6ZU64 1925 aaKnown RBP13.48□□□□□ -0.25
FOXN4-201ENST00000299162 RTL5Q5HYW3 569 aaPredicted RBP13.48□□□□□ -0.25
FOXN4-201ENST00000299162 IL27Q8NEV9 243 aa13.48□□□□□ -0.25
FOXN4-201ENST00000299162 ARID4BQ4LE39 1312 aaPredicted RBP13.47□□□□□ -0.25
FOXN4-201ENST00000299162 WASHC2CQ9Y4E1 1318 aa13.46□□□□□ -0.25
FOXN4-201ENST00000299162 ERBINQ96RT1 1412 aa13.46□□□□□ -0.25
FOXN4-201ENST00000299162 ABCC1P33527 1531 aa13.46□□□□□ -0.26
FOXN4-201ENST00000299162 PER1O15534 1290 aaPredicted RBP13.46□□□□□ -0.26
FOXN4-201ENST00000299162 PAK3O75914 559 aaPredicted RBP13.46□□□□□ -0.26
FOXN4-201ENST00000299162 UGGT1Q9NYU2 1555 aa13.45□□□□□ -0.26
FOXN4-201ENST00000299162 PLIN1O60240 522 aa13.45□□□□□ -0.26
FOXN4-201ENST00000299162 CCDC146Q8IYE0 955 aa13.45□□□□□ -0.26
FOXN4-201ENST00000299162 MLECQ14165 292 aa13.43□□□□□ -0.26
FOXN4-201ENST00000299162 STK26Q9P289 416 aa13.43□□□□□ -0.26
FOXN4-201ENST00000299162 FANCIQ9NVI1 1328 aa13.43□□□□□ -0.26
FOXN4-201ENST00000299162 WDR43Q15061 677 aaKnown RBP eCLIP13.42□□□□□ -0.26
FOXN4-201ENST00000299162 ADAMTS8Q9UP79 889 aa13.42□□□□□ -0.26
FOXN4-201ENST00000299162 NOP58Q9Y2X3 529 aaKnown RBP13.42□□□□□ -0.26
FOXN4-201ENST00000299162 CD109Q6YHK3 1445 aa13.42□□□□□ -0.26
FOXN4-201ENST00000299162 UHRF1BP1LA0JNW5 1464 aa13.41□□□□□ -0.26
FOXN4-201ENST00000299162 MAST1Q9Y2H9 1570 aa13.41□□□□□ -0.26
FOXN4-201ENST00000299162 ERICH6BQ5W0A0 696 aa13.41□□□□□ -0.26
FOXN4-201ENST00000299162 PLPPR3Q6T4P5 718 aa13.41□□□□□ -0.26
FOXN4-201ENST00000299162 DAXXQ9UER7 740 aaPredicted RBP13.41□□□□□ -0.26
FOXN4-201ENST00000299162 ATP10AO60312 1499 aa13.4□□□□□ -0.26
FOXN4-201ENST00000299162 NEUROD2Q15784 382 aa13.4□□□□□ -0.26
FOXN4-201ENST00000299162 PODXL2Q9NZ53 605 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms