RNA–Protein interactions for RNA: ENST00000297596.2

GEM-201, Transcript of GTP binding protein overexpressed in skeletal muscle, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GEM, Length 2,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEM-201ENST00000297596 ABCA8O94911 1581 aa18.53■□□□□ 0.56
GEM-201ENST00000297596 NOP58Q9Y2X3 529 aaKnown RBP18.53■□□□□ 0.56
GEM-201ENST00000297596 E9PCH4 1651 aa18.53■□□□□ 0.56
GEM-201ENST00000297596 NUP160Q12769 1436 aa18.52■□□□□ 0.56
GEM-201ENST00000297596 ATP10BO94823 1461 aa18.52■□□□□ 0.55
GEM-201ENST00000297596 DCAF11Q8TEB1 546 aa18.51■□□□□ 0.55
GEM-201ENST00000297596 FBLN2P98095 1184 aa18.5■□□□□ 0.55
GEM-201ENST00000297596 ARHGEF5Q12774 1597 aa18.49■□□□□ 0.55
GEM-201ENST00000297596 HNRNPMP52272 730 aaKnown RBP eCLIP18.47■□□□□ 0.55
GEM-201ENST00000297596 PAK3O75914 559 aaPredicted RBP18.46■□□□□ 0.55
GEM-201ENST00000297596 ANP32AP39687 249 aaKnown RBP18.44■□□□□ 0.54
GEM-201ENST00000297596 RRP1P56182 461 aaKnown RBP18.44■□□□□ 0.54
GEM-201ENST00000297596 IPO9Q96P70 1041 aaKnown RBP18.43■□□□□ 0.54
GEM-201ENST00000297596 TRPM1Q7Z4N2 1603 aa18.43■□□□□ 0.54
GEM-201ENST00000297596 FAM135AQ9P2D6 1515 aa18.43■□□□□ 0.54
GEM-201ENST00000297596 NLRP13Q86W25 1043 aa18.43■□□□□ 0.54
GEM-201ENST00000297596 PARD3Q8TEW0 1356 aa18.43■□□□□ 0.54
GEM-201ENST00000297596 PRAG1Q86YV5 1406 aa18.42■□□□□ 0.54
GEM-201ENST00000297596 ERCC6Q03468 1493 aa18.41■□□□□ 0.54
GEM-201ENST00000297596 CCDC141Q6ZP82 1450 aa18.41■□□□□ 0.54
GEM-201ENST00000297596 RCAN3Q9UKA8 241 aa18.41■□□□□ 0.54
GEM-201ENST00000297596 DEKP35659 375 aaKnown RBP18.4■□□□□ 0.54
GEM-201ENST00000297596 PDE3BQ13370 1112 aa18.4■□□□□ 0.54
GEM-201ENST00000297596 SAMD9LQ8IVG5 1584 aa18.39■□□□□ 0.53
GEM-201ENST00000297596 EXOC6Q8TAG9 804 aa18.39■□□□□ 0.53
GEM-201ENST00000297596 CCDC144AA2RUR9 1427 aa18.39■□□□□ 0.53
GEM-201ENST00000297596 PER1O15534 1290 aaPredicted RBP18.38■□□□□ 0.53
GEM-201ENST00000297596 RSPH4AQ5TD94 716 aa18.38■□□□□ 0.53
GEM-201ENST00000297596 CDC42BPBQ9Y5S2 1711 aa18.38■□□□□ 0.53
GEM-201ENST00000297596 GPRASP1Q5JY77 1395 aa18.37■□□□□ 0.53
GEM-201ENST00000297596 NBPF1Q3BBV0 1214 aa18.37■□□□□ 0.53
GEM-201ENST00000297596 PREX2Q70Z35 1606 aa18.36■□□□□ 0.53
GEM-201ENST00000297596 NBR1Q14596 966 aa18.36■□□□□ 0.53
GEM-201ENST00000297596 ZBTB47Q9UFB7 747 aaPredicted RBP18.35■□□□□ 0.53
GEM-201ENST00000297596 SALL2Q9Y467 1007 aaPredicted RBP18.35■□□□□ 0.53
GEM-201ENST00000297596 WASHC2CQ9Y4E1 1318 aa18.35■□□□□ 0.53
GEM-201ENST00000297596 LAMC1P11047 1609 aa18.34■□□□□ 0.53
GEM-201ENST00000297596 RGL3Q3MIN7 710 aa18.34■□□□□ 0.53
GEM-201ENST00000297596 PLA2R1Q13018 1463 aa18.34■□□□□ 0.53
GEM-201ENST00000297596 COL17A1Q9UMD9 1497 aaPredicted RBP18.34■□□□□ 0.53
GEM-201ENST00000297596 TCERG1O14776 1098 aaKnown RBP18.34■□□□□ 0.53
GEM-201ENST00000297596 UNC13BO14795 1591 aa18.33■□□□□ 0.53
GEM-201ENST00000297596 A2MP01023 1474 aa18.33■□□□□ 0.53
GEM-201ENST00000297596 INSRP06213 1382 aa18.33■□□□□ 0.52
GEM-201ENST00000297596 PRDM15P57071 1507 aaPredicted RBP18.32■□□□□ 0.52
GEM-201ENST00000297596 TESK2Q96S53 571 aa18.31■□□□□ 0.52
GEM-201ENST00000297596 MAST1Q9Y2H9 1570 aa18.31■□□□□ 0.52
GEM-201ENST00000297596 CDCA7LQ96GN5 454 aa18.3■□□□□ 0.52
GEM-201ENST00000297596 DISP3Q9P2K9 1392 aa18.3■□□□□ 0.52
GEM-201ENST00000297596 ZMYM4Q5VZL5 1548 aa18.3■□□□□ 0.52
GEM-201ENST00000297596 BLMP54132 1417 aaPredicted RBP18.29■□□□□ 0.52
GEM-201ENST00000297596 SYCP2Q9BX26 1530 aa18.29■□□□□ 0.52
GEM-201ENST00000297596 CC2D1BQ5T0F9 858 aaKnown RBP18.29■□□□□ 0.52
GEM-201ENST00000297596 MYO5CQ9NQX4 1742 aa18.28■□□□□ 0.52
GEM-201ENST00000297596 PANK3Q9H999 370 aa18.28■□□□□ 0.52
GEM-201ENST00000297596 ERBINQ96RT1 1412 aa18.28■□□□□ 0.52
GEM-201ENST00000297596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.27■□□□□ 0.52
GEM-201ENST00000297596 IQGAP3Q86VI3 1631 aa18.27■□□□□ 0.52
GEM-201ENST00000297596 EIF2AK4Q9P2K8 1649 aaKnown RBP18.27■□□□□ 0.52
GEM-201ENST00000297596 MS4A1P11836 297 aa18.27■□□□□ 0.52
GEM-201ENST00000297596 PDE4AP27815 886 aa18.27■□□□□ 0.52
GEM-201ENST00000297596 BACH2Q9BYV9 841 aa18.25■□□□□ 0.51
GEM-201ENST00000297596 TMF1P82094 1093 aa18.25■□□□□ 0.51
GEM-201ENST00000297596 ARHGAP5Q13017 1502 aa18.24■□□□□ 0.51
GEM-201ENST00000297596 PLXNC1O60486 1568 aa18.24■□□□□ 0.51
GEM-201ENST00000297596 ATP10AO60312 1499 aa18.23■□□□□ 0.51
GEM-201ENST00000297596 PLEKHH2Q8IVE3 1493 aa18.23■□□□□ 0.51
GEM-201ENST00000297596 TTC37Q6PGP7 1564 aa18.23■□□□□ 0.51
GEM-201ENST00000297596 RTL5Q5HYW3 569 aaPredicted RBP18.22■□□□□ 0.51
GEM-201ENST00000297596 NPM2Q86SE8 214 aaKnown RBP18.22■□□□□ 0.51
GEM-201ENST00000297596 PLIN1O60240 522 aa18.22■□□□□ 0.51
GEM-201ENST00000297596 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.21■□□□□ 0.51
GEM-201ENST00000297596 CRBNQ96SW2 442 aa18.19■□□□□ 0.5
GEM-201ENST00000297596 DUOX2Q9NRD8 1548 aa18.19■□□□□ 0.5
GEM-201ENST00000297596 MAGI2Q86UL8 1455 aa18.19■□□□□ 0.5
GEM-201ENST00000297596 RNF17Q9BXT8 1623 aaKnown RBP18.19■□□□□ 0.5
GEM-201ENST00000297596 ADAMTS8Q9UP79 889 aa18.17■□□□□ 0.5
GEM-201ENST00000297596 WDR7Q9Y4E6 1490 aa18.15■□□□□ 0.5
GEM-201ENST00000297596 PPP2R1AP30153 589 aa18.12■□□□□ 0.49
GEM-201ENST00000297596 C20orf194Q5TEA3 1177 aa18.11■□□□□ 0.49
GEM-201ENST00000297596 KNSTRNQ9Y448 316 aa18.11■□□□□ 0.49
GEM-201ENST00000297596 IQGAP1P46940 1657 aa18.11■□□□□ 0.49
GEM-201ENST00000297596 MADDQ8WXG6 1647 aa18.11■□□□□ 0.49
GEM-201ENST00000297596 AMER1Q5JTC6 1135 aaPredicted RBP18.1■□□□□ 0.49
GEM-201ENST00000297596 SKAP1Q86WV1 359 aa18.1■□□□□ 0.49
GEM-201ENST00000297596 PLEKHH1Q9ULM0 1364 aa18.09■□□□□ 0.49
GEM-201ENST00000297596 KDM2BQ8NHM5 1336 aa18.09■□□□□ 0.49
GEM-201ENST00000297596 WDR43Q15061 677 aaKnown RBP eCLIP18.09■□□□□ 0.49
GEM-201ENST00000297596 DUSP27Q5VZP5 1158 aa18.09■□□□□ 0.49
GEM-201ENST00000297596 ABCC2Q92887 1545 aa18.09■□□□□ 0.49
GEM-201ENST00000297596 USP35Q9P2H5 1018 aa18.08■□□□□ 0.49
GEM-201ENST00000297596 LAS1LQ9Y4W2 734 aaKnown RBP18.08■□□□□ 0.49
GEM-201ENST00000297596 SHROOM2Q13796 1616 aa18.08■□□□□ 0.49
GEM-201ENST00000297596 ZNF521Q96K83 1311 aa18.08■□□□□ 0.48
GEM-201ENST00000297596 CHD1O14646 1710 aa18.07■□□□□ 0.48
GEM-201ENST00000297596 SYNMO15061 1565 aa18.07■□□□□ 0.48
GEM-201ENST00000297596 PLCH2O75038 1416 aa18.07■□□□□ 0.48
GEM-201ENST00000297596 CDCA8Q53HL2 280 aa18.07■□□□□ 0.48
GEM-201ENST00000297596 NEFMP07197 916 aa18.06■□□□□ 0.48
GEM-201ENST00000297596 DDRGK1Q96HY6 314 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms