RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 RSPH4AQ5TD94 716 aa9.28□□□□□ -0.92
DEFB1-201ENST00000297439 CHIC2Q9UKJ5 165 aa9.28□□□□□ -0.92
DEFB1-201ENST00000297439 SPATA31E1Q6ZUB1 1445 aa9.28□□□□□ -0.92
DEFB1-201ENST00000297439 PLEKHD1A6NEE1 506 aa9.27□□□□□ -0.93
DEFB1-201ENST00000297439 TRIM52Q96A61 297 aa9.27□□□□□ -0.93
DEFB1-201ENST00000297439 C9orf84Q5VXU9 1444 aa9.27□□□□□ -0.93
DEFB1-201ENST00000297439 UHRF1BP1Q6BDS2 1440 aa9.27□□□□□ -0.93
DEFB1-201ENST00000297439 ANKRD50Q9ULJ7 1429 aa9.27□□□□□ -0.93
DEFB1-201ENST00000297439 ZNF644Q9H582 1327 aaPredicted RBP9.27□□□□□ -0.93
DEFB1-201ENST00000297439 CNTLNQ9NXG0 1405 aa9.26□□□□□ -0.93
DEFB1-201ENST00000297439 EIF4G2P78344 907 aaKnown RBP eCLIP9.26□□□□□ -0.93
DEFB1-201ENST00000297439 PLEKHH2Q8IVE3 1493 aa9.26□□□□□ -0.93
DEFB1-201ENST00000297439 L3MBTL2Q969R5 705 aa9.25□□□□□ -0.93
DEFB1-201ENST00000297439 FARP1Q9Y4F1 1045 aaPredicted RBP9.25□□□□□ -0.93
DEFB1-201ENST00000297439 UHRF1BP1LA0JNW5 1464 aa9.25□□□□□ -0.93
DEFB1-201ENST00000297439 CCDC141Q6ZP82 1450 aa9.25□□□□□ -0.93
DEFB1-201ENST00000297439 ARID4BQ4LE39 1312 aaPredicted RBP9.25□□□□□ -0.93
DEFB1-201ENST00000297439 ABCC2Q92887 1545 aa9.25□□□□□ -0.93
DEFB1-201ENST00000297439 CHD1O14646 1710 aa9.24□□□□□ -0.93
DEFB1-201ENST00000297439 PLXNC1O60486 1568 aa9.24□□□□□ -0.93
DEFB1-201ENST00000297439 HSPA5P11021 654 aaKnown RBP9.23□□□□□ -0.93
DEFB1-201ENST00000297439 CD44P16070 742 aaKnown RBP9.23□□□□□ -0.93
DEFB1-201ENST00000297439 SAMD9LQ8IVG5 1584 aa9.23□□□□□ -0.93
DEFB1-201ENST00000297439 WASHC2AQ641Q2 1341 aa9.23□□□□□ -0.93
DEFB1-201ENST00000297439 CCDC7Q96M83 1385 aa9.23□□□□□ -0.93
DEFB1-201ENST00000297439 RALGAPBQ86X10 1494 aa9.22□□□□□ -0.93
DEFB1-201ENST00000297439 CLASP1Q7Z460 1538 aa9.22□□□□□ -0.93
DEFB1-201ENST00000297439 ARAP3Q8WWN8 1544 aa9.22□□□□□ -0.93
DEFB1-201ENST00000297439 UNC13BO14795 1591 aa9.22□□□□□ -0.93
DEFB1-201ENST00000297439 SUPT16HQ9Y5B9 1047 aaKnown RBP9.22□□□□□ -0.93
DEFB1-201ENST00000297439 CDC42BPBQ9Y5S2 1711 aa9.22□□□□□ -0.93
DEFB1-201ENST00000297439 MAGI2Q86UL8 1455 aa9.21□□□□□ -0.94
DEFB1-201ENST00000297439 KIF15Q9NS87 1388 aa9.2□□□□□ -0.94
DEFB1-201ENST00000297439 ARID3CA6NKF2 412 aa9.19□□□□□ -0.94
DEFB1-201ENST00000297439 LHX8Q68G74 356 aa9.19□□□□□ -0.94
DEFB1-201ENST00000297439 ATP10AO60312 1499 aa9.19□□□□□ -0.94
DEFB1-201ENST00000297439 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.19□□□□□ -0.94
DEFB1-201ENST00000297439 KDM5CP41229 1560 aa9.19□□□□□ -0.94
DEFB1-201ENST00000297439 ROCK2O75116 1388 aaKnown RBP9.18□□□□□ -0.94
DEFB1-201ENST00000297439 TSPY4P0CV99 314 aa9.18□□□□□ -0.94
DEFB1-201ENST00000297439 TSPY10P0CW01 314 aa9.18□□□□□ -0.94
DEFB1-201ENST00000297439 CLCN6P51797 869 aa9.18□□□□□ -0.94
DEFB1-201ENST00000297439 NBPF8Q3BBV2 869 aa9.18□□□□□ -0.94
DEFB1-201ENST00000297439 KCNH8Q96L42 1107 aa9.18□□□□□ -0.94
DEFB1-201ENST00000297439 MYO5CQ9NQX4 1742 aa9.18□□□□□ -0.94
DEFB1-201ENST00000297439 LAMC1P11047 1609 aa9.17□□□□□ -0.94
DEFB1-201ENST00000297439 IQGAP3Q86VI3 1631 aa9.17□□□□□ -0.94
DEFB1-201ENST00000297439 TTC37Q6PGP7 1564 aa9.17□□□□□ -0.94
DEFB1-201ENST00000297439 FAM135AQ9P2D6 1515 aa9.17□□□□□ -0.94
DEFB1-201ENST00000297439 STAG3Q9UJ98 1225 aa9.17□□□□□ -0.94
DEFB1-201ENST00000297439 ERBINQ96RT1 1412 aa9.16□□□□□ -0.94
DEFB1-201ENST00000297439 NUP155O75694 1391 aa9.16□□□□□ -0.94
DEFB1-201ENST00000297439 SYCP2Q9BX26 1530 aa9.15□□□□□ -0.94
DEFB1-201ENST00000297439 DUOX2Q9NRD8 1548 aa9.15□□□□□ -0.94
DEFB1-201ENST00000297439 PLCH2O75038 1416 aa9.15□□□□□ -0.94
DEFB1-201ENST00000297439 PKD2Q13563 968 aa9.15□□□□□ -0.94
DEFB1-201ENST00000297439 AMER1Q5JTC6 1135 aaPredicted RBP9.15□□□□□ -0.94
DEFB1-201ENST00000297439 HIRIP3Q9BW71 556 aaPredicted RBP9.15□□□□□ -0.94
DEFB1-201ENST00000297439 KTN1Q86UP2 1357 aaKnown RBP9.14□□□□□ -0.95
DEFB1-201ENST00000297439 KIF7Q2M1P5 1343 aa9.14□□□□□ -0.95
DEFB1-201ENST00000297439 PRKRIP1Q9H875 184 aaPredicted RBP9.14□□□□□ -0.95
DEFB1-201ENST00000297439 ABCC1P33527 1531 aa9.14□□□□□ -0.95
DEFB1-201ENST00000297439 ARHGAP5Q13017 1502 aa9.14□□□□□ -0.95
DEFB1-201ENST00000297439 RTEL1-TNFRSF6BF6WH68 1400 aa9.14□□□□□ -0.95
DEFB1-201ENST00000297439 GPRASP1Q5JY77 1395 aa9.13□□□□□ -0.95
DEFB1-201ENST00000297439 USP47Q96K76 1375 aa9.13□□□□□ -0.95
DEFB1-201ENST00000297439 ERICH6BQ5W0A0 696 aa9.13□□□□□ -0.95
DEFB1-201ENST00000297439 ZNF777Q9ULD5 760 aaPredicted RBP9.13□□□□□ -0.95
DEFB1-201ENST00000297439 ZCCHC11Q5TAX3 1644 aaKnown RBP9.13□□□□□ -0.95
DEFB1-201ENST00000297439 NEURL4Q96JN8 1562 aa9.12□□□□□ -0.95
DEFB1-201ENST00000297439 WDR7Q9Y4E6 1490 aa9.12□□□□□ -0.95
DEFB1-201ENST00000297439 EIF2AK4Q9P2K8 1649 aaKnown RBP9.12□□□□□ -0.95
DEFB1-201ENST00000297439 DHX29Q7Z478 1369 aaKnown RBP9.12□□□□□ -0.95
DEFB1-201ENST00000297439 BCORL1Q5H9F3 1711 aa9.11□□□□□ -0.95
DEFB1-201ENST00000297439 SPDYE4A6NLX3 237 aa9.11□□□□□ -0.95
DEFB1-201ENST00000297439 C11orf95C9JLR9 678 aaPredicted RBP9.11□□□□□ -0.95
DEFB1-201ENST00000297439 POTEIP0CG38 1075 aa9.11□□□□□ -0.95
DEFB1-201ENST00000297439 CREBZFQ9NS37 354 aa9.11□□□□□ -0.95
DEFB1-201ENST00000297439 ERCC6L2Q5T890 1561 aa9.11□□□□□ -0.95
DEFB1-201ENST00000297439 TRPM1Q7Z4N2 1603 aa9.1□□□□□ -0.95
DEFB1-201ENST00000297439 NEFLP07196 543 aa9.1□□□□□ -0.95
DEFB1-201ENST00000297439 PRAG1Q86YV5 1406 aa9.1□□□□□ -0.95
DEFB1-201ENST00000297439 E9PCH4 1651 aa9.1□□□□□ -0.95
DEFB1-201ENST00000297439 PLA2R1Q13018 1463 aa9.09□□□□□ -0.95
DEFB1-201ENST00000297439 CCDC144AA2RUR9 1427 aa9.09□□□□□ -0.95
DEFB1-201ENST00000297439 HNRNPMP52272 730 aaKnown RBP eCLIP9.09□□□□□ -0.95
DEFB1-201ENST00000297439 ZNF579Q8NAF0 562 aaKnown RBP9.09□□□□□ -0.95
DEFB1-201ENST00000297439 RTN4Q9NQC3 1192 aaKnown RBP9.09□□□□□ -0.95
DEFB1-201ENST00000297439 DEPDC5O75140 1603 aa9.09□□□□□ -0.95
DEFB1-201ENST00000297439 ZBED9Q6R2W3 1325 aa9.08□□□□□ -0.96
DEFB1-201ENST00000297439 MYT1Q01538 1121 aa9.08□□□□□ -0.96
DEFB1-201ENST00000297439 STAC3Q96MF2 364 aa9.08□□□□□ -0.96
DEFB1-201ENST00000297439 ZRANB1Q9UGI0 708 aa9.08□□□□□ -0.96
DEFB1-201ENST00000297439 PRDM15P57071 1507 aaPredicted RBP9.08□□□□□ -0.96
DEFB1-201ENST00000297439 ZMYM4Q5VZL5 1548 aa9.08□□□□□ -0.96
DEFB1-201ENST00000297439 ABCA9Q8IUA7 1624 aa9.07□□□□□ -0.96
DEFB1-201ENST00000297439 RNF17Q9BXT8 1623 aaKnown RBP9.07□□□□□ -0.96
DEFB1-201ENST00000297439 EFCAB2Q5VUJ9 269 aa9.07□□□□□ -0.96
DEFB1-201ENST00000297439 DCBLD2Q96PD2 775 aa9.07□□□□□ -0.96
DEFB1-201ENST00000297439 INSRP06213 1382 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms