RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 ARHGEF5Q12774 1597 aa16.92■□□□□ 0.3
CAGE1-201ENST00000296742 RSPH4AQ5TD94 716 aa16.92■□□□□ 0.3
CAGE1-201ENST00000296742 RTN4Q9NQC3 1192 aaKnown RBP16.92■□□□□ 0.3
CAGE1-201ENST00000296742 CCDC136Q96JN2 1154 aa16.91■□□□□ 0.3
CAGE1-201ENST00000296742 FAM9BQ8IZU0 186 aa16.9■□□□□ 0.3
CAGE1-201ENST00000296742 CCDC184Q52MB2 194 aa16.9■□□□□ 0.3
CAGE1-201ENST00000296742 PLEKHH2Q8IVE3 1493 aa16.9■□□□□ 0.3
CAGE1-201ENST00000296742 IL27Q8NEV9 243 aa16.89■□□□□ 0.29
CAGE1-201ENST00000296742 KIF7Q2M1P5 1343 aa16.89■□□□□ 0.29
CAGE1-201ENST00000296742 ANP32AP39687 249 aaKnown RBP16.88■□□□□ 0.29
CAGE1-201ENST00000296742 TRAPPC8Q9Y2L5 1435 aa16.88■□□□□ 0.29
CAGE1-201ENST00000296742 MYO5CQ9NQX4 1742 aa16.88■□□□□ 0.29
CAGE1-201ENST00000296742 CCDC7Q96M83 1385 aa16.88■□□□□ 0.29
CAGE1-201ENST00000296742 PLCH2O75038 1416 aa16.88■□□□□ 0.29
CAGE1-201ENST00000296742 FAM135AQ9P2D6 1515 aa16.86■□□□□ 0.29
CAGE1-201ENST00000296742 CARD11Q9BXL7 1154 aa16.86■□□□□ 0.29
CAGE1-201ENST00000296742 USP47Q96K76 1375 aa16.85■□□□□ 0.29
CAGE1-201ENST00000296742 ZBTB47Q9UFB7 747 aaPredicted RBP16.85■□□□□ 0.29
CAGE1-201ENST00000296742 SPATA31E1Q6ZUB1 1445 aa16.84■□□□□ 0.29
CAGE1-201ENST00000296742 OSCARQ8IYS5 282 aa16.84■□□□□ 0.29
CAGE1-201ENST00000296742 IPO9Q96P70 1041 aaKnown RBP16.84■□□□□ 0.29
CAGE1-201ENST00000296742 UHRF1BP1LA0JNW5 1464 aa16.83■□□□□ 0.28
CAGE1-201ENST00000296742 SPAG9O60271 1321 aaKnown RBP16.83■□□□□ 0.28
CAGE1-201ENST00000296742 MRS2Q9HD23 443 aa16.81■□□□□ 0.28
CAGE1-201ENST00000296742 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.81■□□□□ 0.28
CAGE1-201ENST00000296742 CNTLNQ9NXG0 1405 aa16.81■□□□□ 0.28
CAGE1-201ENST00000296742 CCDC144AA2RUR9 1427 aa16.8■□□□□ 0.28
CAGE1-201ENST00000296742 ST20-MTHFSA0A0A6YYL1 179 aa16.8■□□□□ 0.28
CAGE1-201ENST00000296742 NBPF1Q3BBV0 1214 aa16.79■□□□□ 0.28
CAGE1-201ENST00000296742 KDM5DQ9BY66 1539 aa16.79■□□□□ 0.28
CAGE1-201ENST00000296742 PRKRIP1Q9H875 184 aaPredicted RBP16.78■□□□□ 0.28
CAGE1-201ENST00000296742 PLA2R1Q13018 1463 aa16.78■□□□□ 0.28
CAGE1-201ENST00000296742 ZBED9Q6R2W3 1325 aa16.78■□□□□ 0.28
CAGE1-201ENST00000296742 WDR7Q9Y4E6 1490 aa16.78■□□□□ 0.28
CAGE1-201ENST00000296742 SENP3-EIF4A1A0A087X0R7 540 aa16.77■□□□□ 0.28
CAGE1-201ENST00000296742 ASXL2Q76L83 1435 aa16.76■□□□□ 0.27
CAGE1-201ENST00000296742 ABCC1P33527 1531 aa16.76■□□□□ 0.27
CAGE1-201ENST00000296742 NPM1P06748 294 aaKnown RBP eCLIP16.75■□□□□ 0.27
CAGE1-201ENST00000296742 ROCK2O75116 1388 aaKnown RBP16.75■□□□□ 0.27
CAGE1-201ENST00000296742 FANCAO15360 1455 aa16.75■□□□□ 0.27
CAGE1-201ENST00000296742 BCORL1Q5H9F3 1711 aa16.75■□□□□ 0.27
CAGE1-201ENST00000296742 SCAPERQ9BY12 1400 aa16.74■□□□□ 0.27
CAGE1-201ENST00000296742 KIF3BO15066 747 aa16.74■□□□□ 0.27
CAGE1-201ENST00000296742 NPM2Q86SE8 214 aaKnown RBP16.74■□□□□ 0.27
CAGE1-201ENST00000296742 MAST1Q9Y2H9 1570 aa16.74■□□□□ 0.27
CAGE1-201ENST00000296742 DUOX2Q9NRD8 1548 aa16.73■□□□□ 0.27
CAGE1-201ENST00000296742 PLXNC1O60486 1568 aa16.71■□□□□ 0.27
CAGE1-201ENST00000296742 UHRF1BP1Q6BDS2 1440 aa16.71■□□□□ 0.27
CAGE1-201ENST00000296742 LAS1LQ9Y4W2 734 aaKnown RBP16.71■□□□□ 0.27
CAGE1-201ENST00000296742 RALGAPBQ86X10 1494 aa16.7■□□□□ 0.26
CAGE1-201ENST00000296742 KDM5CP41229 1560 aa16.7■□□□□ 0.26
CAGE1-201ENST00000296742 UNC13BO14795 1591 aa16.69■□□□□ 0.26
CAGE1-201ENST00000296742 ERBINQ96RT1 1412 aa16.69■□□□□ 0.26
CAGE1-201ENST00000296742 ADGRL1O94910 1474 aa16.69■□□□□ 0.26
CAGE1-201ENST00000296742 NEFMP07197 916 aa16.69■□□□□ 0.26
CAGE1-201ENST00000296742 A2MP01023 1474 aa16.67■□□□□ 0.26
CAGE1-201ENST00000296742 IQGAP3Q86VI3 1631 aa16.66■□□□□ 0.26
CAGE1-201ENST00000296742 PRAG1Q86YV5 1406 aa16.66■□□□□ 0.26
CAGE1-201ENST00000296742 ZFYVE16Q7Z3T8 1539 aa16.66■□□□□ 0.26
CAGE1-201ENST00000296742 DHX29Q7Z478 1369 aaKnown RBP16.64■□□□□ 0.25
CAGE1-201ENST00000296742 CYB5RLQ6IPT4 315 aa16.64■□□□□ 0.25
CAGE1-201ENST00000296742 ABCA9Q8IUA7 1624 aa16.62■□□□□ 0.25
CAGE1-201ENST00000296742 ATP7AQ04656 1500 aa16.61■□□□□ 0.25
CAGE1-201ENST00000296742 RAPGEF3O95398 923 aa16.61■□□□□ 0.25
CAGE1-201ENST00000296742 GGT6Q6P531 493 aa16.61■□□□□ 0.25
CAGE1-201ENST00000296742 NUDCQ9Y266 331 aa16.61■□□□□ 0.25
CAGE1-201ENST00000296742 RTEL1-TNFRSF6BF6WH68 1400 aa16.61■□□□□ 0.25
CAGE1-201ENST00000296742 MAGI2Q86UL8 1455 aa16.6■□□□□ 0.25
CAGE1-201ENST00000296742 CD109Q6YHK3 1445 aa16.6■□□□□ 0.25
CAGE1-201ENST00000296742 SMG6Q86US8 1419 aaKnown RBP16.6■□□□□ 0.25
CAGE1-201ENST00000296742 POLR1AO95602 1720 aaPredicted RBP16.59■□□□□ 0.25
CAGE1-201ENST00000296742 E9PCH4 1651 aa16.58■□□□□ 0.24
CAGE1-201ENST00000296742 EIF5BO60841 1220 aaKnown RBP16.58■□□□□ 0.24
CAGE1-201ENST00000296742 ARAP3Q8WWN8 1544 aa16.58■□□□□ 0.24
CAGE1-201ENST00000296742 ATP10AO60312 1499 aa16.57■□□□□ 0.24
CAGE1-201ENST00000296742 CHGAP10645 457 aaKnown RBP16.57■□□□□ 0.24
CAGE1-201ENST00000296742 TRPM1Q7Z4N2 1603 aa16.57■□□□□ 0.24
CAGE1-201ENST00000296742 KANK1Q14678 1352 aa16.56■□□□□ 0.24
CAGE1-201ENST00000296742 UBE2Q2Q8WVN8 375 aa16.56■□□□□ 0.24
CAGE1-201ENST00000296742 SENP3Q9H4L4 574 aaPredicted RBP16.56■□□□□ 0.24
CAGE1-201ENST00000296742 USP35Q9P2H5 1018 aa16.56■□□□□ 0.24
CAGE1-201ENST00000296742 BRPF3Q9ULD4 1205 aa16.56■□□□□ 0.24
CAGE1-201ENST00000296742 DISP3Q9P2K9 1392 aa16.56■□□□□ 0.24
CAGE1-201ENST00000296742 TESK2Q96S53 571 aa16.55■□□□□ 0.24
CAGE1-201ENST00000296742 UGGT1Q9NYU2 1555 aa16.55■□□□□ 0.24
CAGE1-201ENST00000296742 CFAP65Q6ZU64 1925 aaKnown RBP16.55■□□□□ 0.24
CAGE1-201ENST00000296742 TMC1Q8TDI8 760 aa16.54■□□□□ 0.24
CAGE1-201ENST00000296742 ARID4BQ4LE39 1312 aaPredicted RBP16.54■□□□□ 0.24
CAGE1-201ENST00000296742 RNF123Q5XPI4 1314 aa16.54■□□□□ 0.24
CAGE1-201ENST00000296742 INO80Q9ULG1 1556 aaPredicted RBP16.54■□□□□ 0.24
CAGE1-201ENST00000296742 CC2D1BQ5T0F9 858 aaKnown RBP16.53■□□□□ 0.24
CAGE1-201ENST00000296742 WASHC2CQ9Y4E1 1318 aa16.52■□□□□ 0.24
CAGE1-201ENST00000296742 PDE4AP27815 886 aa16.51■□□□□ 0.23
CAGE1-201ENST00000296742 PPM1GO15355 546 aaPredicted RBP16.51■□□□□ 0.23
CAGE1-201ENST00000296742 KIDINS220Q9ULH0 1771 aa16.5■□□□□ 0.23
CAGE1-201ENST00000296742 ZNF518AQ6AHZ1 1483 aa16.5■□□□□ 0.23
CAGE1-201ENST00000296742 GPRASP1Q5JY77 1395 aa16.5■□□□□ 0.23
CAGE1-201ENST00000296742 CFAP70Q5T0N1 1121 aa16.5■□□□□ 0.23
CAGE1-201ENST00000296742 PANK3Q9H999 370 aa16.5■□□□□ 0.23
CAGE1-201ENST00000296742 CLTCL1P53675 1640 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms