RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 TCERG1O14776 1098 aaKnown RBP13.6□□□□□ -0.23
CCDC36-201ENST00000296449 RTL5Q5HYW3 569 aaPredicted RBP13.6□□□□□ -0.23
CCDC36-201ENST00000296449 C9orf84Q5VXU9 1444 aa13.59□□□□□ -0.23
CCDC36-201ENST00000296449 CEP170Q5SW79 1584 aa13.59□□□□□ -0.23
CCDC36-201ENST00000296449 DCAF11Q8TEB1 546 aa13.59□□□□□ -0.23
CCDC36-201ENST00000296449 CDC42BPAQ5VT25 1732 aa13.58□□□□□ -0.24
CCDC36-201ENST00000296449 NLRP13Q86W25 1043 aa13.58□□□□□ -0.24
CCDC36-201ENST00000296449 PARD3Q8TEW0 1356 aa13.57□□□□□ -0.24
CCDC36-201ENST00000296449 PDE3BQ13370 1112 aa13.57□□□□□ -0.24
CCDC36-201ENST00000296449 SALL2Q9Y467 1007 aaPredicted RBP13.57□□□□□ -0.24
CCDC36-201ENST00000296449 PTPRGP23470 1445 aa13.56□□□□□ -0.24
CCDC36-201ENST00000296449 PDE4AP27815 886 aa13.56□□□□□ -0.24
CCDC36-201ENST00000296449 DAXXQ9UER7 740 aaPredicted RBP13.56□□□□□ -0.24
CCDC36-201ENST00000296449 NPM2Q86SE8 214 aaKnown RBP13.56□□□□□ -0.24
CCDC36-201ENST00000296449 INSRP06213 1382 aa13.55□□□□□ -0.24
CCDC36-201ENST00000296449 BACH2Q9BYV9 841 aa13.55□□□□□ -0.24
CCDC36-201ENST00000296449 ABCC10Q5T3U5 1492 aa13.54□□□□□ -0.24
CCDC36-201ENST00000296449 ZMYM4Q5VZL5 1548 aa13.54□□□□□ -0.24
CCDC36-201ENST00000296449 MS4A1P11836 297 aa13.54□□□□□ -0.24
CCDC36-201ENST00000296449 EIF4G3O43432 1585 aaKnown RBP13.53□□□□□ -0.24
CCDC36-201ENST00000296449 PER1O15534 1290 aaPredicted RBP13.53□□□□□ -0.24
CCDC36-201ENST00000296449 CDCA7LQ96GN5 454 aa13.53□□□□□ -0.24
CCDC36-201ENST00000296449 TSPY4P0CV99 314 aa13.53□□□□□ -0.24
CCDC36-201ENST00000296449 TSPY10P0CW01 314 aa13.53□□□□□ -0.24
CCDC36-201ENST00000296449 PLEKHD1A6NEE1 506 aa13.52□□□□□ -0.25
CCDC36-201ENST00000296449 PRAG1Q86YV5 1406 aa13.52□□□□□ -0.25
CCDC36-201ENST00000296449 TRPM1Q7Z4N2 1603 aa13.51□□□□□ -0.25
CCDC36-201ENST00000296449 MAGI1Q96QZ7 1491 aaPredicted RBP13.51□□□□□ -0.25
CCDC36-201ENST00000296449 CARMIL2Q6F5E8 1435 aa13.5□□□□□ -0.25
CCDC36-201ENST00000296449 ERCC6Q03468 1493 aa13.5□□□□□ -0.25
CCDC36-201ENST00000296449 USP35Q9P2H5 1018 aa13.5□□□□□ -0.25
CCDC36-201ENST00000296449 ARHGEF5Q12774 1597 aa13.49□□□□□ -0.25
CCDC36-201ENST00000296449 FAM135AQ9P2D6 1515 aa13.49□□□□□ -0.25
CCDC36-201ENST00000296449 BLMP54132 1417 aaPredicted RBP13.49□□□□□ -0.25
CCDC36-201ENST00000296449 WASHC2CQ9Y4E1 1318 aa13.49□□□□□ -0.25
CCDC36-201ENST00000296449 PLIN1O60240 522 aa13.49□□□□□ -0.25
CCDC36-201ENST00000296449 HNRNPMP52272 730 aaKnown RBP eCLIP13.49□□□□□ -0.25
CCDC36-201ENST00000296449 CHMP7Q8WUX9 453 aaPredicted RBP13.49□□□□□ -0.25
CCDC36-201ENST00000296449 ABCA8O94911 1581 aa13.49□□□□□ -0.25
CCDC36-201ENST00000296449 NBPF1Q3BBV0 1214 aa13.48□□□□□ -0.25
CCDC36-201ENST00000296449 LAS1LQ9Y4W2 734 aaKnown RBP13.48□□□□□ -0.25
CCDC36-201ENST00000296449 LAMC1P11047 1609 aa13.48□□□□□ -0.25
CCDC36-201ENST00000296449 ATP10BO94823 1461 aa13.48□□□□□ -0.25
CCDC36-201ENST00000296449 JPH4Q96JJ6 628 aa13.48□□□□□ -0.25
CCDC36-201ENST00000296449 COL17A1Q9UMD9 1497 aaPredicted RBP13.48□□□□□ -0.25
CCDC36-201ENST00000296449 GPRASP1Q5JY77 1395 aa13.48□□□□□ -0.25
CCDC36-201ENST00000296449 SYNJ2O15056 1496 aa13.47□□□□□ -0.25
CCDC36-201ENST00000296449 NEFMP07197 916 aa13.47□□□□□ -0.25
CCDC36-201ENST00000296449 CCDC144AA2RUR9 1427 aa13.47□□□□□ -0.25
CCDC36-201ENST00000296449 PLEKHH2Q8IVE3 1493 aa13.46□□□□□ -0.25
CCDC36-201ENST00000296449 CC2D1BQ5T0F9 858 aaKnown RBP13.46□□□□□ -0.25
CCDC36-201ENST00000296449 DISP3Q9P2K9 1392 aa13.46□□□□□ -0.25
CCDC36-201ENST00000296449 TESK2Q96S53 571 aa13.46□□□□□ -0.25
CCDC36-201ENST00000296449 CRBNQ96SW2 442 aa13.46□□□□□ -0.25
CCDC36-201ENST00000296449 RGL3Q3MIN7 710 aa13.45□□□□□ -0.26
CCDC36-201ENST00000296449 SKAP1Q86WV1 359 aa13.45□□□□□ -0.26
CCDC36-201ENST00000296449 A2MP01023 1474 aa13.44□□□□□ -0.26
CCDC36-201ENST00000296449 NUP160Q12769 1436 aa13.44□□□□□ -0.26
CCDC36-201ENST00000296449 PRDM15P57071 1507 aaPredicted RBP13.44□□□□□ -0.26
CCDC36-201ENST00000296449 PLA2R1Q13018 1463 aa13.44□□□□□ -0.26
CCDC36-201ENST00000296449 CCDC141Q6ZP82 1450 aa13.44□□□□□ -0.26
CCDC36-201ENST00000296449 FBLN2P98095 1184 aa13.43□□□□□ -0.26
CCDC36-201ENST00000296449 PANK3Q9H999 370 aa13.43□□□□□ -0.26
CCDC36-201ENST00000296449 PPM1GO15355 546 aaPredicted RBP13.43□□□□□ -0.26
CCDC36-201ENST00000296449 ERBINQ96RT1 1412 aa13.42□□□□□ -0.26
CCDC36-201ENST00000296449 SAMD9LQ8IVG5 1584 aa13.42□□□□□ -0.26
CCDC36-201ENST00000296449 C20orf194Q5TEA3 1177 aa13.41□□□□□ -0.26
CCDC36-201ENST00000296449 IL27Q8NEV9 243 aa13.41□□□□□ -0.26
CCDC36-201ENST00000296449 DDRGK1Q96HY6 314 aa13.41□□□□□ -0.26
CCDC36-201ENST00000296449 EIF2AK4Q9P2K8 1649 aaKnown RBP13.4□□□□□ -0.26
CCDC36-201ENST00000296449 KDM2BQ8NHM5 1336 aa13.4□□□□□ -0.26
CCDC36-201ENST00000296449 UNC13BO14795 1591 aa13.4□□□□□ -0.26
CCDC36-201ENST00000296449 TMF1P82094 1093 aa13.39□□□□□ -0.27
CCDC36-201ENST00000296449 ADAMTS8Q9UP79 889 aa13.39□□□□□ -0.27
CCDC36-201ENST00000296449 CDC42BPBQ9Y5S2 1711 aa13.38□□□□□ -0.27
CCDC36-201ENST00000296449 RSPH4AQ5TD94 716 aa13.38□□□□□ -0.27
CCDC36-201ENST00000296449 PREX2Q70Z35 1606 aa13.37□□□□□ -0.27
CCDC36-201ENST00000296449 MAST1Q9Y2H9 1570 aa13.37□□□□□ -0.27
CCDC36-201ENST00000296449 MYO5CQ9NQX4 1742 aa13.37□□□□□ -0.27
CCDC36-201ENST00000296449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.36□□□□□ -0.27
CCDC36-201ENST00000296449 PLEKHH1Q9ULM0 1364 aa13.36□□□□□ -0.27
CCDC36-201ENST00000296449 DUSP27Q5VZP5 1158 aa13.36□□□□□ -0.27
CCDC36-201ENST00000296449 CENPQQ7L2Z9 268 aaPredicted RBP13.35□□□□□ -0.27
CCDC36-201ENST00000296449 SYCP2Q9BX26 1530 aa13.35□□□□□ -0.27
CCDC36-201ENST00000296449 ATP10AO60312 1499 aa13.34□□□□□ -0.27
CCDC36-201ENST00000296449 IQGAP3Q86VI3 1631 aa13.34□□□□□ -0.27
CCDC36-201ENST00000296449 RNF17Q9BXT8 1623 aaKnown RBP13.34□□□□□ -0.27
CCDC36-201ENST00000296449 MAGI2Q86UL8 1455 aa13.34□□□□□ -0.27
CCDC36-201ENST00000296449 WDR7Q9Y4E6 1490 aa13.34□□□□□ -0.27
CCDC36-201ENST00000296449 ZNF521Q96K83 1311 aa13.33□□□□□ -0.27
CCDC36-201ENST00000296449 PPP2R1AP30153 589 aa13.33□□□□□ -0.28
CCDC36-201ENST00000296449 SLC4A3P48751 1232 aa13.32□□□□□ -0.28
CCDC36-201ENST00000296449 NFKBIBQ15653 356 aa13.32□□□□□ -0.28
CCDC36-201ENST00000296449 RTN4Q9NQC3 1192 aaKnown RBP13.32□□□□□ -0.28
CCDC36-201ENST00000296449 CLASP1Q7Z460 1538 aa13.32□□□□□ -0.28
CCDC36-201ENST00000296449 C8orf34Q49A92 452 aa13.32□□□□□ -0.28
CCDC36-201ENST00000296449 ANO8Q9HCE9 1232 aaPredicted RBP13.32□□□□□ -0.28
CCDC36-201ENST00000296449 PLXNC1O60486 1568 aa13.31□□□□□ -0.28
CCDC36-201ENST00000296449 WDR43Q15061 677 aaKnown RBP eCLIP13.31□□□□□ -0.28
CCDC36-201ENST00000296449 FAM161AQ3B820 660 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms