RNA–Protein interactions for RNA: ENST00000292174.4

CXCR5-201, Transcript of C-X-C motif chemokine receptor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCR5, Length 4,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR5-201ENST00000292174 CAMSAP2Q08AD1 1489 aa17.3■□□□□ 0.36
CXCR5-201ENST00000292174 NAIPQ13075 1403 aa17.3■□□□□ 0.36
CXCR5-201ENST00000292174 MAPK8IP3Q9UPT6 1336 aa17.3■□□□□ 0.36
CXCR5-201ENST00000292174 KIAA0556O60303 1618 aa17.3■□□□□ 0.36
CXCR5-201ENST00000292174 MORC1Q86VD1 984 aa17.3■□□□□ 0.36
CXCR5-201ENST00000292174 CC2D1BQ5T0F9 858 aaKnown RBP17.29■□□□□ 0.36
CXCR5-201ENST00000292174 CD109Q6YHK3 1445 aa17.29■□□□□ 0.36
CXCR5-201ENST00000292174 FANCIQ9NVI1 1328 aa17.29■□□□□ 0.36
CXCR5-201ENST00000292174 TERF2IPQ9NYB0 399 aa17.29■□□□□ 0.36
CXCR5-201ENST00000292174 PBRM1Q86U86 1689 aa17.28■□□□□ 0.36
CXCR5-201ENST00000292174 AKNAQ7Z591 1439 aa17.27■□□□□ 0.36
CXCR5-201ENST00000292174 USP47Q96K76 1375 aa17.27■□□□□ 0.35
CXCR5-201ENST00000292174 TARBP1Q13395 1621 aaKnown RBP17.26■□□□□ 0.35
CXCR5-201ENST00000292174 ABCC5O15440 1437 aa17.25■□□□□ 0.35
CXCR5-201ENST00000292174 ATP10BO94823 1461 aa17.25■□□□□ 0.35
CXCR5-201ENST00000292174 NUP153P49790 1475 aaKnown RBP17.25■□□□□ 0.35
CXCR5-201ENST00000292174 ST20-MTHFSA0A0A6YYL1 179 aa17.24■□□□□ 0.35
CXCR5-201ENST00000292174 SAFB2Q14151 953 aaKnown RBP eCLIP17.24■□□□□ 0.35
CXCR5-201ENST00000292174 PPM1GO15355 546 aaPredicted RBP17.23■□□□□ 0.35
CXCR5-201ENST00000292174 RSPH6AQ9H0K4 717 aa17.23■□□□□ 0.35
CXCR5-201ENST00000292174 HAP1P54257 671 aaPredicted RBP17.23■□□□□ 0.35
CXCR5-201ENST00000292174 SLC52A1Q9NWF4 448 aa17.21■□□□□ 0.35
CXCR5-201ENST00000292174 ADGRL1O94910 1474 aa17.21■□□□□ 0.34
CXCR5-201ENST00000292174 GPATCH8Q9UKJ3 1502 aaKnown RBP17.21■□□□□ 0.34
CXCR5-201ENST00000292174 EVC2Q86UK5 1308 aa17.2■□□□□ 0.34
CXCR5-201ENST00000292174 NCOA1Q15788 1441 aa17.19■□□□□ 0.34
CXCR5-201ENST00000292174 NLRP13Q86W25 1043 aa17.19■□□□□ 0.34
CXCR5-201ENST00000292174 TRAK1Q9UPV9 953 aa17.19■□□□□ 0.34
CXCR5-201ENST00000292174 POGZQ7Z3K3 1410 aa17.18■□□□□ 0.34
CXCR5-201ENST00000292174 ZBTB7CA1YPR0 619 aa17.18■□□□□ 0.34
CXCR5-201ENST00000292174 NPM2Q86SE8 214 aaKnown RBP17.17■□□□□ 0.34
CXCR5-201ENST00000292174 PLCH2O75038 1416 aa17.17■□□□□ 0.34
CXCR5-201ENST00000292174 ITSN2Q9NZM3 1697 aa17.17■□□□□ 0.34
CXCR5-201ENST00000292174 RPGRIP1LQ68CZ1 1315 aa17.16■□□□□ 0.34
CXCR5-201ENST00000292174 U2SURPO15042 1029 aaKnown RBP17.16■□□□□ 0.34
CXCR5-201ENST00000292174 TNNT2P45379 298 aaPredicted RBP17.16■□□□□ 0.34
CXCR5-201ENST00000292174 VSIG10Q8N0Z9 540 aa17.16■□□□□ 0.34
CXCR5-201ENST00000292174 DISP1Q96F81 1524 aa17.15■□□□□ 0.34
CXCR5-201ENST00000292174 FANCAO15360 1455 aa17.15■□□□□ 0.34
CXCR5-201ENST00000292174 MS4A1P11836 297 aa17.15■□□□□ 0.34
CXCR5-201ENST00000292174 LMOD2Q6P5Q4 547 aa17.14■□□□□ 0.34
CXCR5-201ENST00000292174 CFAP43Q8NDM7 1665 aa17.14■□□□□ 0.33
CXCR5-201ENST00000292174 RAPGEF3O95398 923 aa17.14■□□□□ 0.33
CXCR5-201ENST00000292174 DENND4BO75064 1496 aaPredicted RBP17.13■□□□□ 0.33
CXCR5-201ENST00000292174 PPP6R1Q9UPN7 881 aa17.13■□□□□ 0.33
CXCR5-201ENST00000292174 SAMD9Q5K651 1589 aa17.13■□□□□ 0.33
CXCR5-201ENST00000292174 NUTM2DQ5VT03 806 aaPredicted RBP17.13■□□□□ 0.33
CXCR5-201ENST00000292174 CHMP4BQ9H444 224 aaKnown RBP17.13■□□□□ 0.33
CXCR5-201ENST00000292174 MYH16Q9H6N6 1097 aa17.13■□□□□ 0.33
CXCR5-201ENST00000292174 CENPJQ9HC77 1338 aaPredicted RBP17.12■□□□□ 0.33
CXCR5-201ENST00000292174 ANKRD30BQ9BXX2 1392 aa17.12■□□□□ 0.33
CXCR5-201ENST00000292174 ABCC2Q92887 1545 aa17.12■□□□□ 0.33
CXCR5-201ENST00000292174 WDR7Q9Y4E6 1490 aa17.12■□□□□ 0.33
CXCR5-201ENST00000292174 ASXL2Q76L83 1435 aa17.11■□□□□ 0.33
CXCR5-201ENST00000292174 TCOF1Q13428 1488 aaKnown RBP17.11■□□□□ 0.33
CXCR5-201ENST00000292174 MYBBP1AQ9BQG0 1328 aaKnown RBP17.1■□□□□ 0.33
CXCR5-201ENST00000292174 CALD1Q05682 793 aaKnown RBP17.1■□□□□ 0.33
CXCR5-201ENST00000292174 UPF2Q9HAU5 1272 aaKnown RBP17.1■□□□□ 0.33
CXCR5-201ENST00000292174 CCDC7Q96M83 1385 aa17.09■□□□□ 0.33
CXCR5-201ENST00000292174 NAP1L5Q96NT1 182 aaPredicted RBP17.08■□□□□ 0.32
CXCR5-201ENST00000292174 PANK3Q9H999 370 aa17.08■□□□□ 0.32
CXCR5-201ENST00000292174 CGNL1Q0VF96 1302 aa17.08■□□□□ 0.32
CXCR5-201ENST00000292174 PPP4R2Q9NY27 417 aa17.07■□□□□ 0.32
CXCR5-201ENST00000292174 NEUROD2Q15784 382 aa17.07■□□□□ 0.32
CXCR5-201ENST00000292174 TEX14Q8IWB6 1497 aa17.07■□□□□ 0.32
CXCR5-201ENST00000292174 NGDNQ8NEJ9 315 aaKnown RBP17.06■□□□□ 0.32
CXCR5-201ENST00000292174 DHX29Q7Z478 1369 aaKnown RBP17.06■□□□□ 0.32
CXCR5-201ENST00000292174 PRKRIP1Q9H875 184 aaPredicted RBP17.06■□□□□ 0.32
CXCR5-201ENST00000292174 PDE3BQ13370 1112 aa17.05■□□□□ 0.32
CXCR5-201ENST00000292174 CEP170Q5SW79 1584 aa17.04■□□□□ 0.32
CXCR5-201ENST00000292174 HSP90AA1P07900 732 aaKnown RBP17.04■□□□□ 0.32
CXCR5-201ENST00000292174 NCLP19338 710 aaKnown RBP17.04■□□□□ 0.32
CXCR5-201ENST00000292174 DDRGK1Q96HY6 314 aa17.03■□□□□ 0.32
CXCR5-201ENST00000292174 CHMP4AQ9BY43 222 aa17.03■□□□□ 0.32
CXCR5-201ENST00000292174 PLEKHG5O94827 1062 aa17.03■□□□□ 0.32
CXCR5-201ENST00000292174 U2AF1L5P0DN76 240 aaPredicted RBP17.03■□□□□ 0.32
CXCR5-201ENST00000292174 U2AF1Q01081 240 aaKnown RBP eCLIP17.03■□□□□ 0.32
CXCR5-201ENST00000292174 THEMISQ8N1K5 641 aaPredicted RBP17.03■□□□□ 0.32
CXCR5-201ENST00000292174 SHANK2Q9UPX8 1470 aa17.02■□□□□ 0.32
CXCR5-201ENST00000292174 NGEFQ8N5V2 710 aa17.02■□□□□ 0.32
CXCR5-201ENST00000292174 USP35Q9P2H5 1018 aa17.02■□□□□ 0.32
CXCR5-201ENST00000292174 KIF7Q2M1P5 1343 aa17.02■□□□□ 0.31
CXCR5-201ENST00000292174 FTSJ3Q8IY81 847 aaKnown RBP17.01■□□□□ 0.31
CXCR5-201ENST00000292174 WASHC2AQ641Q2 1341 aa17.01■□□□□ 0.31
CXCR5-201ENST00000292174 DUOX2Q9NRD8 1548 aa17.01■□□□□ 0.31
CXCR5-201ENST00000292174 ERBINQ96RT1 1412 aa17■□□□□ 0.31
CXCR5-201ENST00000292174 CNTLNQ9NXG0 1405 aa17■□□□□ 0.31
CXCR5-201ENST00000292174 ZNF518AQ6AHZ1 1483 aa17■□□□□ 0.31
CXCR5-201ENST00000292174 PAK3O75914 559 aaPredicted RBP16.99■□□□□ 0.31
CXCR5-201ENST00000292174 MINK1Q8N4C8 1332 aaPredicted RBP16.99■□□□□ 0.31
CXCR5-201ENST00000292174 HSP90AA2PQ14568 343 aaPredicted RBP16.99■□□□□ 0.31
CXCR5-201ENST00000292174 RTF1Q92541 710 aaKnown RBP16.99■□□□□ 0.31
CXCR5-201ENST00000292174 CFAP70Q5T0N1 1121 aa16.98■□□□□ 0.31
CXCR5-201ENST00000292174 IRX6P78412 446 aaPredicted RBP16.97■□□□□ 0.31
CXCR5-201ENST00000292174 LMOD3Q0VAK6 560 aa16.97■□□□□ 0.31
CXCR5-201ENST00000292174 LAS1LQ9Y4W2 734 aaKnown RBP16.97■□□□□ 0.31
CXCR5-201ENST00000292174 RTEL1-TNFRSF6BF6WH68 1400 aa16.97■□□□□ 0.31
CXCR5-201ENST00000292174 ABCC10Q5T3U5 1492 aa16.97■□□□□ 0.31
CXCR5-201ENST00000292174 COG3Q96JB2 828 aa16.96■□□□□ 0.31
CXCR5-201ENST00000292174 NBPF8Q3BBV2 869 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms