RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 MAST1Q9Y2H9 1570 aa27.28■■□□□ 1.96
SCUBE1-201ENST00000290460 UNC13BO14795 1591 aa27.27■■□□□ 1.96
SCUBE1-201ENST00000290460 CCDC144AA2RUR9 1427 aa27.26■■□□□ 1.95
SCUBE1-201ENST00000290460 ROCK2O75116 1388 aaKnown RBP27.25■■□□□ 1.95
SCUBE1-201ENST00000290460 RGL3Q3MIN7 710 aa27.24■■□□□ 1.95
SCUBE1-201ENST00000290460 PLEKHH2Q8IVE3 1493 aa27.23■■□□□ 1.95
SCUBE1-201ENST00000290460 PLA2R1Q13018 1463 aa27.23■■□□□ 1.95
SCUBE1-201ENST00000290460 PLXNC1O60486 1568 aa27.21■■□□□ 1.95
SCUBE1-201ENST00000290460 TRPM1Q7Z4N2 1603 aa27.21■■□□□ 1.95
SCUBE1-201ENST00000290460 RBM19Q9Y4C8 960 aaKnown RBP27.2■■□□□ 1.95
SCUBE1-201ENST00000290460 PRAG1Q86YV5 1406 aa27.19■■□□□ 1.94
SCUBE1-201ENST00000290460 ZCCHC11Q5TAX3 1644 aaKnown RBP27.18■■□□□ 1.94
SCUBE1-201ENST00000290460 SENP3-EIF4A1A0A087X0R7 540 aa27.18■■□□□ 1.94
SCUBE1-201ENST00000290460 IQGAP3Q86VI3 1631 aa27.18■■□□□ 1.94
SCUBE1-201ENST00000290460 MYT1Q01538 1121 aa27.17■■□□□ 1.94
SCUBE1-201ENST00000290460 NBPF1Q3BBV0 1214 aa27.15■■□□□ 1.94
SCUBE1-201ENST00000290460 A2MP01023 1474 aa27.15■■□□□ 1.94
SCUBE1-201ENST00000290460 E9PCH4 1651 aa27.14■■□□□ 1.94
SCUBE1-201ENST00000290460 DUOX2Q9NRD8 1548 aa27.13■■□□□ 1.93
SCUBE1-201ENST00000290460 PLCH2O75038 1416 aa27.12■■□□□ 1.93
SCUBE1-201ENST00000290460 TMC1Q8TDI8 760 aa27.11■■□□□ 1.93
SCUBE1-201ENST00000290460 PNISRQ8TF01 805 aaKnown RBP27.11■■□□□ 1.93
SCUBE1-201ENST00000290460 ERICH6BQ5W0A0 696 aa27.1■■□□□ 1.93
SCUBE1-201ENST00000290460 PPP4R2Q9NY27 417 aa27.1■■□□□ 1.93
SCUBE1-201ENST00000290460 CLASP1Q7Z460 1538 aa27.1■■□□□ 1.93
SCUBE1-201ENST00000290460 MAGI2Q86UL8 1455 aa27.07■■□□□ 1.92
SCUBE1-201ENST00000290460 EFCAB2Q5VUJ9 269 aa27.07■■□□□ 1.92
SCUBE1-201ENST00000290460 ABCC1P33527 1531 aa27.07■■□□□ 1.92
SCUBE1-201ENST00000290460 ERBINQ96RT1 1412 aa27.07■■□□□ 1.92
SCUBE1-201ENST00000290460 TRAPPC8Q9Y2L5 1435 aa27.07■■□□□ 1.92
SCUBE1-201ENST00000290460 SMG6Q86US8 1419 aaKnown RBP27.06■■□□□ 1.92
SCUBE1-201ENST00000290460 B4GALNT3Q6L9W6 998 aa27.04■■□□□ 1.92
SCUBE1-201ENST00000290460 MYBBP1AQ9BQG0 1328 aaKnown RBP27.03■■□□□ 1.92
SCUBE1-201ENST00000290460 GPRASP1Q5JY77 1395 aa27.03■■□□□ 1.92
SCUBE1-201ENST00000290460 UHRF1BP1LA0JNW5 1464 aa27.03■■□□□ 1.92
SCUBE1-201ENST00000290460 NUDCQ9Y266 331 aa27.01■■□□□ 1.91
SCUBE1-201ENST00000290460 PRDM15P57071 1507 aaPredicted RBP27.01■■□□□ 1.91
SCUBE1-201ENST00000290460 RALBP1Q15311 655 aa27■■□□□ 1.91
SCUBE1-201ENST00000290460 ATP10AO60312 1499 aa27■■□□□ 1.91
SCUBE1-201ENST00000290460 BRD4O60885 1362 aaPredicted RBP26.99■■□□□ 1.91
SCUBE1-201ENST00000290460 LAMC1P11047 1609 aa26.98■■□□□ 1.91
SCUBE1-201ENST00000290460 DISP3Q9P2K9 1392 aa26.98■■□□□ 1.91
SCUBE1-201ENST00000290460 AFAP1Q8N556 730 aa26.97■■□□□ 1.91
SCUBE1-201ENST00000290460 LRPPRCP42704 1394 aaKnown RBP26.97■■□□□ 1.91
SCUBE1-201ENST00000290460 KTN1Q86UP2 1357 aaKnown RBP26.97■■□□□ 1.91
SCUBE1-201ENST00000290460 COL17A1Q9UMD9 1497 aaPredicted RBP26.96■■□□□ 1.91
SCUBE1-201ENST00000290460 EIF2AK4Q9P2K8 1649 aaKnown RBP26.96■■□□□ 1.91
SCUBE1-201ENST00000290460 TESK2Q96S53 571 aa26.96■■□□□ 1.91
SCUBE1-201ENST00000290460 ANP32EQ9BTT0 268 aa26.95■■□□□ 1.9
SCUBE1-201ENST00000290460 SPAG9O60271 1321 aaKnown RBP26.94■■□□□ 1.9
SCUBE1-201ENST00000290460 PARD3Q8TEW0 1356 aa26.92■■□□□ 1.9
SCUBE1-201ENST00000290460 PER1O15534 1290 aaPredicted RBP26.92■■□□□ 1.9
SCUBE1-201ENST00000290460 ZFYVE16Q7Z3T8 1539 aa26.91■■□□□ 1.9
SCUBE1-201ENST00000290460 RNF17Q9BXT8 1623 aaKnown RBP26.89■■□□□ 1.89
SCUBE1-201ENST00000290460 NLRP13Q86W25 1043 aa26.88■■□□□ 1.89
SCUBE1-201ENST00000290460 CC2D1BQ5T0F9 858 aaKnown RBP26.87■■□□□ 1.89
SCUBE1-201ENST00000290460 RNF123Q5XPI4 1314 aa26.87■■□□□ 1.89
SCUBE1-201ENST00000290460 PANK3Q9H999 370 aa26.85■■□□□ 1.89
SCUBE1-201ENST00000290460 SALL2Q9Y467 1007 aaPredicted RBP26.85■■□□□ 1.89
SCUBE1-201ENST00000290460 RTEL1-TNFRSF6BF6WH68 1400 aa26.84■■□□□ 1.89
SCUBE1-201ENST00000290460 ARAP3Q8WWN8 1544 aa26.84■■□□□ 1.89
SCUBE1-201ENST00000290460 SPHKAPQ2M3C7 1700 aa26.84■■□□□ 1.89
SCUBE1-201ENST00000290460 MADDQ8WXG6 1647 aa26.84■■□□□ 1.89
SCUBE1-201ENST00000290460 TMF1P82094 1093 aa26.83■■□□□ 1.89
SCUBE1-201ENST00000290460 WDR7Q9Y4E6 1490 aa26.83■■□□□ 1.89
SCUBE1-201ENST00000290460 TRPM2O94759 1503 aa26.82■■□□□ 1.88
SCUBE1-201ENST00000290460 CEP152O94986 1710 aa26.82■■□□□ 1.88
SCUBE1-201ENST00000290460 DEPDC5O75140 1603 aa26.81■■□□□ 1.88
SCUBE1-201ENST00000290460 CLTCL1P53675 1640 aa26.81■■□□□ 1.88
SCUBE1-201ENST00000290460 FANCAO15360 1455 aa26.8■■□□□ 1.88
SCUBE1-201ENST00000290460 MSH5O43196 834 aa26.79■■□□□ 1.88
SCUBE1-201ENST00000290460 ABCA9Q8IUA7 1624 aa26.79■■□□□ 1.88
SCUBE1-201ENST00000290460 ATP7AQ04656 1500 aa26.79■■□□□ 1.88
SCUBE1-201ENST00000290460 INO80Q9ULG1 1556 aaPredicted RBP26.77■■□□□ 1.88
SCUBE1-201ENST00000290460 IQGAP1P46940 1657 aa26.77■■□□□ 1.88
SCUBE1-201ENST00000290460 MYT1LQ9UL68 1186 aa26.77■■□□□ 1.88
SCUBE1-201ENST00000290460 TET3O43151 1660 aa26.76■■□□□ 1.87
SCUBE1-201ENST00000290460 PTPRTO14522 1441 aa26.75■■□□□ 1.87
SCUBE1-201ENST00000290460 WASHC2CQ9Y4E1 1318 aa26.75■■□□□ 1.87
SCUBE1-201ENST00000290460 FANCIQ9NVI1 1328 aa26.74■■□□□ 1.87
SCUBE1-201ENST00000290460 KIF3BO15066 747 aa26.73■■□□□ 1.87
SCUBE1-201ENST00000290460 SCAPERQ9BY12 1400 aa26.73■■□□□ 1.87
SCUBE1-201ENST00000290460 CCDC136Q96JN2 1154 aa26.73■■□□□ 1.87
SCUBE1-201ENST00000290460 ADGRL1O94910 1474 aa26.72■■□□□ 1.87
SCUBE1-201ENST00000290460 KANK1Q14678 1352 aa26.69■■□□□ 1.86
SCUBE1-201ENST00000290460 VWDEQ8N2E2 1590 aa26.69■■□□□ 1.86
SCUBE1-201ENST00000290460 UGGT1Q9NYU2 1555 aa26.67■■□□□ 1.86
SCUBE1-201ENST00000290460 CDCA7LQ96GN5 454 aa26.67■■□□□ 1.86
SCUBE1-201ENST00000290460 SCAF11Q99590 1463 aaKnown RBP26.66■■□□□ 1.86
SCUBE1-201ENST00000290460 MROH1Q8NDA8 1641 aa26.66■■□□□ 1.86
SCUBE1-201ENST00000290460 ASXL2Q76L83 1435 aa26.65■■□□□ 1.86
SCUBE1-201ENST00000290460 RRP1P56182 461 aaKnown RBP26.65■■□□□ 1.86
SCUBE1-201ENST00000290460 RCAN3Q9UKA8 241 aa26.65■■□□□ 1.86
SCUBE1-201ENST00000290460 BLMP54132 1417 aaPredicted RBP26.63■■□□□ 1.85
SCUBE1-201ENST00000290460 KNSTRNQ9Y448 316 aa26.62■■□□□ 1.85
SCUBE1-201ENST00000290460 PDE3BQ13370 1112 aa26.61■■□□□ 1.85
SCUBE1-201ENST00000290460 KIDINS220Q9ULH0 1771 aa26.6■■□□□ 1.85
SCUBE1-201ENST00000290460 STAC3Q96MF2 364 aa26.59■■□□□ 1.85
SCUBE1-201ENST00000290460 SYNMO15061 1565 aa26.59■■□□□ 1.85
SCUBE1-201ENST00000290460 MYOM1P52179 1685 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms