RNA–Protein interactions for RNA: ENST00000290178.4

PAXBP1-201, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PAXBP1, Length 2,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-201ENST00000290178 SHROOM2Q13796 1616 aa29.61■■■□□ 2.33
PAXBP1-201ENST00000290178 ROCK2O75116 1388 aaKnown RBP29.6■■■□□ 2.33
PAXBP1-201ENST00000290178 CCDC144AA2RUR9 1427 aa29.57■■■□□ 2.32
PAXBP1-201ENST00000290178 ABCC2Q92887 1545 aa29.56■■■□□ 2.32
PAXBP1-201ENST00000290178 NBPF1Q3BBV0 1214 aa29.56■■■□□ 2.32
PAXBP1-201ENST00000290178 PLEKHH2Q8IVE3 1493 aa29.55■■■□□ 2.32
PAXBP1-201ENST00000290178 MYT1Q01538 1121 aa29.55■■■□□ 2.32
PAXBP1-201ENST00000290178 PLA2R1Q13018 1463 aa29.55■■■□□ 2.32
PAXBP1-201ENST00000290178 PRAG1Q86YV5 1406 aa29.5■■■□□ 2.31
PAXBP1-201ENST00000290178 TMC1Q8TDI8 760 aa29.5■■■□□ 2.31
PAXBP1-201ENST00000290178 MAST1Q9Y2H9 1570 aa29.5■■■□□ 2.31
PAXBP1-201ENST00000290178 PNISRQ8TF01 805 aaKnown RBP29.5■■■□□ 2.31
PAXBP1-201ENST00000290178 PPP4R2Q9NY27 417 aa29.5■■■□□ 2.31
PAXBP1-201ENST00000290178 MYO5CQ9NQX4 1742 aa29.49■■■□□ 2.31
PAXBP1-201ENST00000290178 UNC13BO14795 1591 aa29.47■■■□□ 2.31
PAXBP1-201ENST00000290178 ERICH6BQ5W0A0 696 aa29.46■■■□□ 2.31
PAXBP1-201ENST00000290178 B4GALNT3Q6L9W6 998 aa29.45■■■□□ 2.3
PAXBP1-201ENST00000290178 A2MP01023 1474 aa29.44■■■□□ 2.3
PAXBP1-201ENST00000290178 TRPM1Q7Z4N2 1603 aa29.43■■■□□ 2.3
PAXBP1-201ENST00000290178 PLCH2O75038 1416 aa29.41■■■□□ 2.3
PAXBP1-201ENST00000290178 PLXNC1O60486 1568 aa29.41■■■□□ 2.3
PAXBP1-201ENST00000290178 EFCAB2Q5VUJ9 269 aa29.41■■■□□ 2.3
PAXBP1-201ENST00000290178 SMG6Q86US8 1419 aaKnown RBP29.39■■■□□ 2.3
PAXBP1-201ENST00000290178 ZCCHC11Q5TAX3 1644 aaKnown RBP29.39■■■□□ 2.29
PAXBP1-201ENST00000290178 IQGAP3Q86VI3 1631 aa29.38■■■□□ 2.29
PAXBP1-201ENST00000290178 NUDCQ9Y266 331 aa29.38■■■□□ 2.29
PAXBP1-201ENST00000290178 TRAPPC8Q9Y2L5 1435 aa29.38■■■□□ 2.29
PAXBP1-201ENST00000290178 DUOX2Q9NRD8 1548 aa29.38■■■□□ 2.29
PAXBP1-201ENST00000290178 MYBBP1AQ9BQG0 1328 aaKnown RBP29.37■■■□□ 2.29
PAXBP1-201ENST00000290178 RALBP1Q15311 655 aa29.35■■■□□ 2.29
PAXBP1-201ENST00000290178 ANP32EQ9BTT0 268 aa29.35■■■□□ 2.29
PAXBP1-201ENST00000290178 E9PCH4 1651 aa29.33■■■□□ 2.29
PAXBP1-201ENST00000290178 AFAP1Q8N556 730 aa29.33■■■□□ 2.29
PAXBP1-201ENST00000290178 GPRASP1Q5JY77 1395 aa29.32■■■□□ 2.28
PAXBP1-201ENST00000290178 ERBINQ96RT1 1412 aa29.32■■■□□ 2.28
PAXBP1-201ENST00000290178 TESK2Q96S53 571 aa29.31■■■□□ 2.28
PAXBP1-201ENST00000290178 BRD4O60885 1362 aaPredicted RBP29.31■■■□□ 2.28
PAXBP1-201ENST00000290178 DISP3Q9P2K9 1392 aa29.31■■■□□ 2.28
PAXBP1-201ENST00000290178 PER1O15534 1290 aaPredicted RBP29.29■■■□□ 2.28
PAXBP1-201ENST00000290178 CLASP1Q7Z460 1538 aa29.29■■■□□ 2.28
PAXBP1-201ENST00000290178 LRPPRCP42704 1394 aaKnown RBP29.29■■■□□ 2.28
PAXBP1-201ENST00000290178 MAGI2Q86UL8 1455 aa29.28■■■□□ 2.28
PAXBP1-201ENST00000290178 ABCC1P33527 1531 aa29.28■■■□□ 2.28
PAXBP1-201ENST00000290178 SALL2Q9Y467 1007 aaPredicted RBP29.26■■■□□ 2.28
PAXBP1-201ENST00000290178 SPAG9O60271 1321 aaKnown RBP29.26■■■□□ 2.27
PAXBP1-201ENST00000290178 UHRF1BP1LA0JNW5 1464 aa29.25■■■□□ 2.27
PAXBP1-201ENST00000290178 KTN1Q86UP2 1357 aaKnown RBP29.25■■■□□ 2.27
PAXBP1-201ENST00000290178 CC2D1BQ5T0F9 858 aaKnown RBP29.25■■■□□ 2.27
PAXBP1-201ENST00000290178 PRDM15P57071 1507 aaPredicted RBP29.24■■■□□ 2.27
PAXBP1-201ENST00000290178 ATP10AO60312 1499 aa29.24■■■□□ 2.27
PAXBP1-201ENST00000290178 COL17A1Q9UMD9 1497 aaPredicted RBP29.22■■■□□ 2.27
PAXBP1-201ENST00000290178 PARD3Q8TEW0 1356 aa29.22■■■□□ 2.27
PAXBP1-201ENST00000290178 PANK3Q9H999 370 aa29.22■■■□□ 2.27
PAXBP1-201ENST00000290178 NLRP13Q86W25 1043 aa29.21■■■□□ 2.27
PAXBP1-201ENST00000290178 RNF123Q5XPI4 1314 aa29.21■■■□□ 2.27
PAXBP1-201ENST00000290178 MSH5O43196 834 aa29.21■■■□□ 2.27
PAXBP1-201ENST00000290178 TMF1P82094 1093 aa29.16■■■□□ 2.26
PAXBP1-201ENST00000290178 LAMC1P11047 1609 aa29.16■■■□□ 2.26
PAXBP1-201ENST00000290178 EIF2AK4Q9P2K8 1649 aaKnown RBP29.15■■■□□ 2.26
PAXBP1-201ENST00000290178 MYT1LQ9UL68 1186 aa29.13■■■□□ 2.25
PAXBP1-201ENST00000290178 ZFYVE16Q7Z3T8 1539 aa29.11■■■□□ 2.25
PAXBP1-201ENST00000290178 CCDC136Q96JN2 1154 aa29.09■■■□□ 2.25
PAXBP1-201ENST00000290178 RTEL1-TNFRSF6BF6WH68 1400 aa29.09■■■□□ 2.25
PAXBP1-201ENST00000290178 FANCIQ9NVI1 1328 aa29.08■■■□□ 2.25
PAXBP1-201ENST00000290178 KIF3BO15066 747 aa29.06■■■□□ 2.24
PAXBP1-201ENST00000290178 WDR7Q9Y4E6 1490 aa29.05■■■□□ 2.24
PAXBP1-201ENST00000290178 RNF17Q9BXT8 1623 aaKnown RBP29.05■■■□□ 2.24
PAXBP1-201ENST00000290178 FANCAO15360 1455 aa29.04■■■□□ 2.24
PAXBP1-201ENST00000290178 CDCA7LQ96GN5 454 aa29.04■■■□□ 2.24
PAXBP1-201ENST00000290178 WASHC2CQ9Y4E1 1318 aa29.04■■■□□ 2.24
PAXBP1-201ENST00000290178 MADDQ8WXG6 1647 aa29.03■■■□□ 2.24
PAXBP1-201ENST00000290178 SCAPERQ9BY12 1400 aa29.03■■■□□ 2.24
PAXBP1-201ENST00000290178 TRPM2O94759 1503 aa29.02■■■□□ 2.24
PAXBP1-201ENST00000290178 CLTCL1P53675 1640 aa29.01■■■□□ 2.24
PAXBP1-201ENST00000290178 PTPRTO14522 1441 aa29.01■■■□□ 2.23
PAXBP1-201ENST00000290178 ARAP3Q8WWN8 1544 aa29.01■■■□□ 2.23
PAXBP1-201ENST00000290178 ATP7AQ04656 1500 aa28.99■■■□□ 2.23
PAXBP1-201ENST00000290178 RRP1P56182 461 aaKnown RBP28.99■■■□□ 2.23
PAXBP1-201ENST00000290178 RCAN3Q9UKA8 241 aa28.99■■■□□ 2.23
PAXBP1-201ENST00000290178 SPHKAPQ2M3C7 1700 aa28.99■■■□□ 2.23
PAXBP1-201ENST00000290178 KANK1Q14678 1352 aa28.96■■■□□ 2.23
PAXBP1-201ENST00000290178 DEPDC5O75140 1603 aa28.95■■■□□ 2.23
PAXBP1-201ENST00000290178 ADGRL1O94910 1474 aa28.95■■■□□ 2.23
PAXBP1-201ENST00000290178 CEP152O94986 1710 aa28.95■■■□□ 2.22
PAXBP1-201ENST00000290178 ABCA9Q8IUA7 1624 aa28.95■■■□□ 2.22
PAXBP1-201ENST00000290178 EXOC6Q8TAG9 804 aa28.94■■■□□ 2.22
PAXBP1-201ENST00000290178 KNSTRNQ9Y448 316 aa28.94■■■□□ 2.22
PAXBP1-201ENST00000290178 IQGAP1P46940 1657 aa28.93■■■□□ 2.22
PAXBP1-201ENST00000290178 INO80Q9ULG1 1556 aaPredicted RBP28.93■■■□□ 2.22
PAXBP1-201ENST00000290178 PDE3BQ13370 1112 aa28.92■■■□□ 2.22
PAXBP1-201ENST00000290178 TET3O43151 1660 aa28.92■■■□□ 2.22
PAXBP1-201ENST00000290178 SCAF11Q99590 1463 aaKnown RBP28.92■■■□□ 2.22
PAXBP1-201ENST00000290178 UGGT1Q9NYU2 1555 aa28.92■■■□□ 2.22
PAXBP1-201ENST00000290178 ADAMTS8Q9UP79 889 aa28.91■■■□□ 2.22
PAXBP1-201ENST00000290178 CFAP70Q5T0N1 1121 aa28.9■■■□□ 2.22
PAXBP1-201ENST00000290178 ASXL2Q76L83 1435 aa28.89■■■□□ 2.22
PAXBP1-201ENST00000290178 BLMP54132 1417 aaPredicted RBP28.89■■■□□ 2.22
PAXBP1-201ENST00000290178 PPP2R1AP30153 589 aa28.88■■■□□ 2.21
PAXBP1-201ENST00000290178 AMER1Q5JTC6 1135 aaPredicted RBP28.88■■■□□ 2.21
PAXBP1-201ENST00000290178 VWDEQ8N2E2 1590 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms